TAF12-DT

Summary

TAF12-DT (TAF12 divergent transcript, HGNC:52502) is a long non-coding RNA gene on chromosome 1p35.3.

Predicted to enable pre-mRNA 5’-splice site binding activity. Predicted to be involved in mRNA 5’-splice site recognition. Predicted to be part of U11 snRNP.

Source: NCBI Gene 105378616 — RefSeq curated summary.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52502
Approved symbol	TAF12-DT
Name	TAF12 divergent transcript
Location	1p35.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000229388
Ensembl biotype	lncRNA
Entrez	105378616
RNAcentral	URS0000BC450F — lncRNA, 1117 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 7 — 7 lncRNA

ENST00000420776, ENST00000427804, ENST00000833534, ENST00000833535, ENST00000833536, ENST00000833537, ENST00000833538

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000420776 — 2 exons

Exon	Start	End
ENSE00004250203	28648197	28648805
ENSE00004250207	28643177	28643517

Expression profiles

Bgee: expression breadth ubiquitous, 131 present calls, max score 94.30.

Top tissues by expression

134 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
quadriceps femoris	UBERON:0001377	94.30	gold quality
cerebellar vermis	UBERON:0004720	87.47	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	85.34	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	79.93	silver quality
gastrocnemius	UBERON:0001388	78.99	gold quality
muscle of leg	UBERON:0001383	78.58	gold quality
skeletal muscle tissue	UBERON:0001134	76.73	gold quality
hindlimb stylopod muscle	UBERON:0004252	75.67	gold quality
ventricular zone	UBERON:0003053	70.91	gold quality
thymus	UBERON:0002370	70.34	silver quality
apex of heart	UBERON:0002098	69.48	gold quality
heart left ventricle	UBERON:0002084	69.47	gold quality
sural nerve	UBERON:0015488	69.30	gold quality
heart	UBERON:0000948	68.20	gold quality
stromal cell of endometrium	CL:0002255	67.76	gold quality
right atrium auricular region	UBERON:0006631	67.33	gold quality
spinal cord	UBERON:0002240	66.55	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	66.52	gold quality
bone marrow cell	CL:0002092	65.54	silver quality
left coronary artery	UBERON:0001626	65.54	gold quality
tibial nerve	UBERON:0001323	65.07	gold quality
islet of Langerhans	UBERON:0000006	64.56	gold quality
thoracic aorta	UBERON:0001515	64.50	gold quality
ascending aorta	UBERON:0001496	64.33	gold quality
descending thoracic aorta	UBERON:0002345	64.27	gold quality
calcaneal tendon	UBERON:0003701	63.91	gold quality
substantia nigra	UBERON:0002038	63.74	gold quality
popliteal artery	UBERON:0002250	63.53	gold quality
corpus callosum	UBERON:0002336	63.50	gold quality
tibial artery	UBERON:0007610	63.48	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.17

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.