TAPT1-AS1

Summary

TAPT1-AS1 (TAPT1 antisense RNA 1, HGNC:26832) is a long non-coding RNA gene on chromosome 4p15.32.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:26832
Approved symbol	TAPT1-AS1
Name	TAPT1 antisense RNA 1
Location	4p15.32
Locus type	RNA, long non-coding
Status	Approved
Aliases	FLJ39653
Ensembl gene	ENSG00000263327
Ensembl biotype	lncRNA
Entrez	202020
RNAcentral	URS000075A9DF — lncRNA, 2547 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000570786, ENST00000573308, ENST00000573950, ENST00000782842, ENST00000782847

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000570786 — 3 exons

Exon	Start	End
ENSE00002658836	16238771	16238871
ENSE00002659528	16227045	16227177
ENSE00002665061	16256257	16258187

Expression profiles

Bgee: expression breadth ubiquitous, 133 present calls, max score 86.10.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 4.4696 / max 108.5483, expressed in 1395 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
47024	3.8662	1321
47023	0.6034	264

Top tissues by expression

133 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
calcaneal tendon	UBERON:0003701	86.10	gold quality
corpus callosum	UBERON:0002336	84.99	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	78.98	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	78.41	gold quality
adrenal tissue	UBERON:0018303	76.32	gold quality
pituitary gland	UBERON:0000007	75.41	gold quality
right adrenal gland	UBERON:0001233	74.88	gold quality
lower esophagus mucosa	UBERON:0035834	74.63	gold quality
right uterine tube	UBERON:0001302	74.60	gold quality
right adrenal gland cortex	UBERON:0035827	74.60	gold quality
mucosa of transverse colon	UBERON:0004991	73.62	gold quality
adenohypophysis	UBERON:0002196	73.49	gold quality
leukocyte	CL:0000738	73.33	gold quality
sural nerve	UBERON:0015488	73.32	gold quality
monocyte	CL:0000576	73.31	gold quality
adrenal gland	UBERON:0002369	73.18	gold quality
left adrenal gland	UBERON:0001234	73.09	gold quality
bone marrow cell	CL:0002092	72.72	silver quality
body of pancreas	UBERON:0001150	72.64	gold quality
left adrenal gland cortex	UBERON:0035825	72.46	gold quality
endometrium	UBERON:0001295	72.07	gold quality
pancreas	UBERON:0001264	72.04	gold quality
right lobe of liver	UBERON:0001114	72.02	gold quality
granulocyte	CL:0000094	71.80	gold quality
liver	UBERON:0002107	71.55	gold quality
adult mammalian kidney	UBERON:0000082	71.53	gold quality
fundus of stomach	UBERON:0001160	71.20	gold quality
kidney	UBERON:0002113	71.16	gold quality
left ovary	UBERON:0002119	70.54	gold quality
right ovary	UBERON:0002118	70.53	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	3.23

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.