TARS1-DT

Summary

TARS1-DT (TARS1 divergent transcript, HGNC:55565) is a long non-coding RNA gene on chromosome 5p13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55565
Approved symbol	TARS1-DT
Name	TARS1 divergent transcript
Location	5p13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000249572
Ensembl biotype	lncRNA
Entrez	107986411
RNAcentral	URS0002A43EFB — lncRNA, 1916 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000507251, ENST00000688369, ENST00000691449, ENST00000750755, ENST00000750756, ENST00000750757

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000507251 — 3 exons

Exon	Start	End
ENSE00004095377	33440205	33440634
ENSE00004095378	33418737	33418988
ENSE00004095381	33423978	33424146

Expression profiles

Bgee: expression breadth ubiquitous, 129 present calls, max score 91.02.

Top tissues by expression

129 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	91.02	gold quality
right uterine tube	UBERON:0001302	74.97	gold quality
rectum	UBERON:0001052	72.93	gold quality
smooth muscle tissue	UBERON:0001135	71.43	gold quality
islet of Langerhans	UBERON:0000006	70.89	gold quality
fallopian tube	UBERON:0003889	70.20	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	69.72	gold quality
bone marrow cell	CL:0002092	68.54	silver quality
duodenum	UBERON:0002114	68.48	gold quality
muscle tissue	UBERON:0002385	68.11	gold quality
lymph node	UBERON:0000029	68.09	gold quality
ventricular zone	UBERON:0003053	67.78	gold quality
vermiform appendix	UBERON:0001154	67.08	gold quality
endometrium	UBERON:0001295	66.92	gold quality
urinary bladder	UBERON:0001255	66.69	gold quality
placenta	UBERON:0001987	66.67	gold quality
bone marrow	UBERON:0002371	66.63	gold quality
gall bladder	UBERON:0002110	66.44	gold quality
right coronary artery	UBERON:0001625	66.35	gold quality
pancreas	UBERON:0001264	66.13	gold quality
ganglionic eminence	UBERON:0004023	66.09	gold quality
right lobe of thyroid gland	UBERON:0001119	65.22	gold quality
cortical plate	UBERON:0005343	65.06	gold quality
skeletal muscle tissue	UBERON:0001134	64.81	gold quality
monocyte	CL:0000576	64.74	gold quality
adult mammalian kidney	UBERON:0000082	64.72	gold quality
transverse colon	UBERON:0001157	64.57	gold quality
adenohypophysis	UBERON:0002196	64.18	gold quality
kidney	UBERON:0002113	64.01	gold quality
tonsil	UBERON:0002372	63.91	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.88

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.