TBC1D9-AS1

Summary

TBC1D9-AS1 (TBC1D9 antisense RNA 1, HGNC:58411) is a long non-coding RNA gene on chromosome 4q31.21.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58411
Approved symbol	TBC1D9-AS1
Name	TBC1D9 antisense RNA 1
Location	4q31.21
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000248335
Ensembl biotype	lncRNA
Entrez	124900787

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000503844

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000503844 — 2 exons

Exon	Start	End
ENSE00002048062	140712168	140712283
ENSE00002051578	140715796	140716081

Expression profiles

Bgee: expression breadth broad, 82 present calls, max score 94.01.

Top tissues by expression

82 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	94.01	gold quality
bone marrow cell	CL:0002092	73.08	gold quality
bone marrow	UBERON:0002371	70.96	gold quality
colonic epithelium	UBERON:0000397	67.90	silver quality
skeletal muscle tissue	UBERON:0001134	63.73	silver quality
adrenal tissue	UBERON:0018303	62.58	gold quality
islet of Langerhans	UBERON:0000006	62.24	gold quality
kidney	UBERON:0002113	61.92	gold quality
tonsil	UBERON:0002372	59.80	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	58.38	gold quality
prefrontal cortex	UBERON:0000451	57.61	gold quality
liver	UBERON:0002107	57.18	gold quality
adrenal gland	UBERON:0002369	56.99	gold quality
monocyte	CL:0000576	56.60	gold quality
cortex of kidney	UBERON:0001225	55.42	gold quality
gastrocnemius	UBERON:0001388	54.87	gold quality
pancreas	UBERON:0001264	54.76	gold quality
blood	UBERON:0000178	53.86	silver quality
heart	UBERON:0000948	53.55	gold quality
stomach	UBERON:0000945	53.23	gold quality
calcaneal tendon	UBERON:0003701	52.18	silver quality
adult mammalian kidney	UBERON:0000082	51.91	gold quality
uterine cervix	UBERON:0000002	50.12	silver quality
caudate nucleus	UBERON:0001873	49.72	gold quality
endometrium	UBERON:0001295	49.58	gold quality
intestine	UBERON:0000160	49.57	gold quality
thoracic mammary gland	UBERON:0005200	49.29	gold quality
heart left ventricle	UBERON:0002084	49.15	gold quality
Brodmann (1909) area 9	UBERON:0013540	48.07	gold quality
lung	UBERON:0002048	47.95	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.12

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.