TBC1D9-AS2

Summary

TBC1D9-AS2 (TBC1D9 antisense RNA 2, HGNC:58700) is a long non-coding RNA gene on chromosome 4q31.21.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58700
Approved symbol	TBC1D9-AS2
Name	TBC1D9 antisense RNA 2
Location	4q31.21
Locus type	RNA, long non-coding
Status	Approved
Aliases	TBC1D9-AS2
Ensembl gene	ENSG00000273472
Ensembl biotype	lncRNA
Entrez	143222017

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000609937, ENST00000783277, ENST00000783278, ENST00000783279

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000609937 — 1 exons

Exon	Start	End
ENSE00004157206	140756316	140758766

Expression profiles

Bgee: expression breadth ubiquitous, 129 present calls, max score 82.20.

Top tissues by expression

129 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bone marrow cell	CL:0002092	82.20	gold quality
monocyte	CL:0000576	70.06	gold quality
leukocyte	CL:0000738	70.05	gold quality
bone marrow	UBERON:0002371	68.44	gold quality
spleen	UBERON:0002106	67.82	gold quality
granulocyte	CL:0000094	67.39	gold quality
colonic epithelium	UBERON:0000397	64.61	silver quality
thoracic mammary gland	UBERON:0005200	64.06	gold quality
placenta	UBERON:0001987	63.92	gold quality
tonsil	UBERON:0002372	62.50	gold quality
ventricular zone	UBERON:0003053	62.25	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	62.23	gold quality
blood	UBERON:0000178	61.40	gold quality
apex of heart	UBERON:0002098	61.13	gold quality
omental fat pad	UBERON:0010414	61.12	gold quality
prefrontal cortex	UBERON:0000451	60.99	gold quality
cerebellum	UBERON:0002037	60.79	gold quality
cerebellar cortex	UBERON:0002129	60.61	gold quality
adipose tissue	UBERON:0001013	60.51	gold quality
cerebellar hemisphere	UBERON:0002245	60.45	gold quality
vermiform appendix	UBERON:0001154	60.26	gold quality
ganglionic eminence	UBERON:0004023	60.15	gold quality
hindlimb stylopod muscle	UBERON:0004252	60.09	gold quality
adult mammalian kidney	UBERON:0000082	60.03	gold quality
subcutaneous adipose tissue	UBERON:0002190	59.99	gold quality
lymph node	UBERON:0000029	59.70	gold quality
kidney	UBERON:0002113	58.92	gold quality
cortical plate	UBERON:0005343	58.91	silver quality
right hemisphere of cerebellum	UBERON:0014890	58.87	gold quality
small intestine Peyer’s patch	UBERON:0003454	58.17	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.43

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.