TBL1XR1-AS1

Summary

TBL1XR1-AS1 (TBL1XR1 antisense RNA 1, HGNC:41243) is a long non-coding RNA gene on chromosome 3q26.32.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41243
Approved symbol	TBL1XR1-AS1
Name	TBL1XR1 antisense RNA 1
Location	3q26.32
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000231310
Ensembl biotype	lncRNA
Entrez	100874217
RNAcentral	URS000223167D — lncRNA, 807 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000454723, ENST00000617758

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000454723 — 2 exons

Exon	Start	End
ENSE00001651251	177044861	177044984
ENSE00001752038	177047634	177047923

Expression profiles

Bgee: expression breadth ubiquitous, 117 present calls, max score 89.39.

Top tissues by expression

117 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	89.39	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	87.44	gold quality
corpus callosum	UBERON:0002336	80.04	gold quality
ventricular zone	UBERON:0003053	74.70	gold quality
skeletal muscle tissue	UBERON:0001134	72.75	gold quality
bone marrow cell	CL:0002092	71.65	silver quality
adrenal tissue	UBERON:0018303	70.40	gold quality
tonsil	UBERON:0002372	70.01	gold quality
calcaneal tendon	UBERON:0003701	68.48	gold quality
ganglionic eminence	UBERON:0004023	66.11	gold quality
bone marrow	UBERON:0002371	65.13	gold quality
hindlimb stylopod muscle	UBERON:0004252	60.65	gold quality
sural nerve	UBERON:0015488	60.18	silver quality
blood	UBERON:0000178	59.15	gold quality
liver	UBERON:0002107	58.21	gold quality
lung	UBERON:0002048	57.05	gold quality
lymph node	UBERON:0000029	56.56	gold quality
kidney	UBERON:0002113	56.30	gold quality
uterine cervix	UBERON:0000002	56.19	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	55.84	gold quality
monocyte	CL:0000576	55.82	gold quality
vagina	UBERON:0000996	55.61	gold quality
urinary bladder	UBERON:0001255	55.47	gold quality
heart	UBERON:0000948	54.64	gold quality
vermiform appendix	UBERON:0001154	54.41	gold quality
islet of Langerhans	UBERON:0000006	54.40	gold quality
ectocervix	UBERON:0012249	54.40	gold quality
prefrontal cortex	UBERON:0000451	54.16	gold quality
endometrium	UBERON:0001295	54.07	gold quality
heart left ventricle	UBERON:0002084	54.07	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.74

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.