TCF12-DT

Summary

TCF12-DT (TCF12 divergent transcript, HGNC:27078) is a long non-coding RNA gene on chromosome 15q21.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:27078
Approved symbol	TCF12-DT
Name	TCF12 divergent transcript
Location	15q21.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000285331
Ensembl biotype	lncRNA
Entrez	145783
RNAcentral	URS000075D60D — lncRNA, 3017 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000559920, ENST00000560587, ENST00000561122, ENST00000648603

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000559920 — 4 exons

Exon	Start	End
ENSE00002541078	56917065	56917212
ENSE00002548736	56917540	56917648
ENSE00002563324	56859668	56861540
ENSE00003827040	56890014	56890167

Expression profiles

Bgee: expression breadth ubiquitous, 182 present calls, max score 84.90.

Top tissues by expression

242 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
parotid gland	UBERON:0001831	84.90	gold quality
sperm	CL:0000019	84.56	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	82.20	gold quality
pancreatic ductal cell	CL:0002079	81.74	silver quality
endothelial cell	CL:0000115	80.90	silver quality
cortical plate	UBERON:0005343	80.55	gold quality
epithelial cell of pancreas	CL:0000083	79.24	gold quality
body of pancreas	UBERON:0001150	78.77	gold quality
tendon of biceps brachii	UBERON:0008188	78.70	gold quality
ganglionic eminence	UBERON:0004023	78.55	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	78.16	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	77.76	gold quality
prefrontal cortex	UBERON:0000451	77.26	gold quality
tendon	UBERON:0000043	76.94	gold quality
calcaneal tendon	UBERON:0003701	76.90	gold quality
pancreas	UBERON:0001264	76.78	gold quality
muscle of leg	UBERON:0001383	76.73	gold quality
hindlimb stylopod muscle	UBERON:0004252	76.71	gold quality
gastrocnemius	UBERON:0001388	76.57	gold quality
thoracic aorta	UBERON:0001515	76.34	gold quality
ascending aorta	UBERON:0001496	76.31	gold quality
spinal cord	UBERON:0002240	76.27	gold quality
aorta	UBERON:0000947	76.07	gold quality
left coronary artery	UBERON:0001626	76.02	gold quality
popliteal artery	UBERON:0002250	76.02	gold quality
tibial artery	UBERON:0007610	76.00	gold quality
descending thoracic aorta	UBERON:0002345	75.84	gold quality
ileal mucosa	UBERON:0000331	75.66	silver quality
germinal epithelium of ovary	UBERON:0001304	75.60	silver quality
tibialis anterior	UBERON:0001385	75.58	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	5.16

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.