TCF4-AS2

Summary

TCF4-AS2 (TCF4 antisense RNA 2, HGNC:51643) is a long non-coding RNA gene on chromosome 18q21.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:51643
Approved symbol	TCF4-AS2
Name	TCF4 antisense RNA 2
Location	18q21.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000267402
Ensembl biotype	lncRNA
Entrez	106480339
RNAcentral	URS0002A2A5A4 — lncRNA, 733 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000586467

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000586467 — 2 exons

Exon	Start	End
ENSE00004281600	55495998	55496563
ENSE00004281601	55492058	55492224

Expression profiles

Bgee: expression breadth broad, 92 present calls, max score 92.06.

Top tissues by expression

92 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	92.06	gold quality
colonic epithelium	UBERON:0000397	81.58	gold quality
corpus callosum	UBERON:0002336	72.57	gold quality
hindlimb stylopod muscle	UBERON:0004252	71.58	gold quality
cortical plate	UBERON:0005343	71.21	gold quality
calcaneal tendon	UBERON:0003701	70.30	gold quality
adrenal tissue	UBERON:0018303	65.20	gold quality
myometrium	UBERON:0001296	62.08	silver quality
sural nerve	UBERON:0015488	61.37	silver quality
stomach	UBERON:0000945	61.33	gold quality
pancreas	UBERON:0001264	61.02	gold quality
prefrontal cortex	UBERON:0000451	60.38	gold quality
adrenal gland	UBERON:0002369	60.32	gold quality
kidney	UBERON:0002113	59.22	gold quality
stromal cell of endometrium	CL:0002255	57.97	gold quality
tonsil	UBERON:0002372	57.52	silver quality
muscle of leg	UBERON:0001383	57.44	gold quality
urinary bladder	UBERON:0001255	57.04	silver quality
uterine cervix	UBERON:0000002	56.82	silver quality
superior frontal gyrus	UBERON:0002661	56.64	gold quality
testis	UBERON:0000473	56.43	gold quality
liver	UBERON:0002107	54.52	gold quality
Ammon’s horn	UBERON:0001954	54.35	gold quality
lung	UBERON:0002048	53.74	gold quality
endometrium	UBERON:0001295	53.63	silver quality
primary visual cortex	UBERON:0002436	53.54	gold quality
cortex of kidney	UBERON:0001225	52.82	gold quality
heart	UBERON:0000948	51.88	gold quality
blood	UBERON:0000178	51.83	gold quality
gastrocnemius	UBERON:0001388	51.22	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.75

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.