TDRD6-AS1

Summary

TDRD6-AS1 (TDRD6 and SLC25A27 antisense RNA 1, HGNC:56119) is a long non-coding RNA gene on chromosome 6p12.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56119
Approved symbol	TDRD6-AS1
Name	TDRD6 and SLC25A27 antisense RNA 1
Location	6p12.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000242973
Ensembl biotype	lncRNA
Entrez	101926934
RNAcentral	URS0000A77491 — lncRNA, 391 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000422284, ENST00000434329, ENST00000571590, ENST00000734840

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000422284 — 2 exons

Exon	Start	End
ENSE00004067267	46687600	46687869
ENSE00004067268	46670427	46670585

Expression profiles

Bgee: expression breadth ubiquitous, 150 present calls, max score 87.31.

Top tissues by expression

242 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.31	gold quality
left testis	UBERON:0004533	80.92	gold quality
right testis	UBERON:0004534	80.20	gold quality
testis	UBERON:0000473	77.97	gold quality
hindlimb stylopod muscle	UBERON:0004252	76.30	gold quality
ventricular zone	UBERON:0003053	75.56	gold quality
cortical plate	UBERON:0005343	75.18	gold quality
right hemisphere of cerebellum	UBERON:0014890	69.23	gold quality
pancreatic ductal cell	CL:0002079	67.39	silver quality
mucosa of stomach	UBERON:0001199	66.63	gold quality
cerebellar cortex	UBERON:0002129	65.30	gold quality
cerebellar hemisphere	UBERON:0002245	65.27	gold quality
sural nerve	UBERON:0015488	64.80	gold quality
monocyte	CL:0000576	64.27	gold quality
cerebellum	UBERON:0002037	63.51	gold quality
prefrontal cortex	UBERON:0000451	60.81	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	60.73	gold quality
muscle of leg	UBERON:0001383	59.32	gold quality
gastrocnemius	UBERON:0001388	59.31	gold quality
gall bladder	UBERON:0002110	59.17	gold quality
right lobe of liver	UBERON:0001114	58.88	gold quality
esophagogastric junction muscularis propria	UBERON:0035841	58.72	gold quality
nucleus accumbens	UBERON:0001882	58.59	gold quality
calcaneal tendon	UBERON:0003701	57.75	gold quality
popliteal artery	UBERON:0002250	57.31	gold quality
lower esophagus muscularis layer	UBERON:0035833	57.29	gold quality
tibial artery	UBERON:0007610	57.27	gold quality
lower esophagus	UBERON:0013473	57.22	gold quality
vermiform appendix	UBERON:0001154	56.30	gold quality
right ovary	UBERON:0002118	56.16	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.48

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.