TENT5C-DT

Summary

TENT5C-DT (TENT5C divergent transcript, HGNC:55656) is a long non-coding RNA gene on chromosome 1p12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55656
Approved symbol	TENT5C-DT
Name	TENT5C divergent transcript
Location	1p12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000236866
Ensembl biotype	lncRNA
Entrez	100996263
RNAcentral	URS000075D717 — lncRNA, 449 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 12 — 12 lncRNA

ENST00000425010, ENST00000440801, ENST00000456126, ENST00000719417, ENST00000719418, ENST00000719419, ENST00000719420, ENST00000719421, ENST00000719422, ENST00000719423, ENST00000719424, ENST00000719425

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000425010 — 3 exons

Exon	Start	End
ENSE00001685137	117603999	117604399
ENSE00001744045	117604789	117604936
ENSE00001795064	117605557	117605770

Expression profiles

Bgee: expression breadth broad, 99 present calls, max score 92.64.

Top tissues by expression

210 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	92.64	gold quality
sperm	CL:0000019	89.01	gold quality
left testis	UBERON:0004533	81.30	gold quality
right testis	UBERON:0004534	80.17	gold quality
testis	UBERON:0000473	77.56	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	71.49	gold quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	69.46	gold quality
bone marrow cell	CL:0002092	68.30	silver quality
kidney epithelium	UBERON:0004819	65.76	gold quality
sural nerve	UBERON:0015488	61.31	silver quality
calcaneal tendon	UBERON:0003701	60.56	gold quality
pancreatic ductal cell	CL:0002079	60.07	silver quality
monocyte	CL:0000576	58.35	gold quality
islet of Langerhans	UBERON:0000006	56.70	gold quality
trabecular bone tissue	UBERON:0002483	56.65	gold quality
middle temporal gyrus	UBERON:0002771	56.42	gold quality
nasal cavity epithelium	UBERON:0005384	55.85	gold quality
decidua	UBERON:0002450	55.36	gold quality
superior frontal gyrus	UBERON:0002661	55.09	gold quality
hindlimb stylopod muscle	UBERON:0004252	55.07	gold quality
Brodmann (1909) area 23	UBERON:0013554	55.06	gold quality
postcentral gyrus	UBERON:0002581	54.97	gold quality
epithelial cell of pancreas	CL:0000083	54.66	gold quality
cardiac muscle of right atrium	UBERON:0003379	54.34	gold quality
left ventricle myocardium	UBERON:0006566	54.23	gold quality
adrenal tissue	UBERON:0018303	54.22	gold quality
primary visual cortex	UBERON:0002436	53.58	gold quality
upper arm skin	UBERON:0004263	53.52	gold quality
tibialis anterior	UBERON:0001385	52.87	silver quality
upper leg skin	UBERON:0004262	52.87	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.42

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.