TEX264
gene geneOn this page
Also known as ZSIG11FLJ13935
Summary
TEX264 (testis expressed 264, ER-phagy receptor, HGNC:30247) is a protein-coding gene on chromosome 3p21.2, encoding Testis-expressed protein 264 (Q9Y6I9). Major reticulophagy (also called ER-phagy) receptor that acts independently of other candidate reticulophagy receptors to remodel subdomains of the endoplasmic reticulum into autophagosomes upon nutrient stress, which then fuse with lysosomes for endoplasmic reticulum turnover.
Enables signaling receptor activity. Involved in protein-DNA covalent cross-linking repair. Acts upstream of or within reticulophagy. Located in several cellular components, including autophagosome membrane; endoplasmic reticulum membrane; and replication fork.
Source: NCBI Gene 51368 — RefSeq curated summary.
At a glance
- Clinical variants (ClinVar): 61 total
- Druggable target: yes
- MANE Select transcript:
NM_015926
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:30247 |
| Approved symbol | TEX264 |
| Name | testis expressed 264, ER-phagy receptor |
| Location | 3p21.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | ZSIG11, FLJ13935 |
| Ensembl gene | ENSG00000164081 |
| Ensembl biotype | protein_coding |
| OMIM | 620608 |
| Entrez | 51368 |
Gene structure
Transcript identifiers
Ensembl transcripts: 61 — 57 protein_coding, 4 protein_coding_CDS_not_defined
ENST00000341333, ENST00000395057, ENST00000412249, ENST00000415259, ENST00000416589, ENST00000419358, ENST00000425781, ENST00000444233, ENST00000457573, ENST00000457927, ENST00000463857, ENST00000483429, ENST00000489026, ENST00000493444, ENST00000611400, ENST00000614067, ENST00000859143, ENST00000859144, ENST00000859145, ENST00000859146, ENST00000859147, ENST00000859148, ENST00000859149, ENST00000859150, ENST00000859151, ENST00000859152, ENST00000859153, ENST00000859154, ENST00000859155, ENST00000859156, ENST00000859157, ENST00000859158, ENST00000859159, ENST00000859160, ENST00000859161, ENST00000859162, ENST00000859163, ENST00000859164, ENST00000859165, ENST00000859166, ENST00000859167, ENST00000859168, ENST00000859169, ENST00000859170, ENST00000859171, ENST00000859172, ENST00000859173, ENST00000859174, ENST00000859175, ENST00000933301, ENST00000933302, ENST00000933303, ENST00000933304, ENST00000933305, ENST00000941685, ENST00000941686, ENST00000941687, ENST00000941688, ENST00000941689, ENST00000941690, ENST00000941691
RefSeq mRNA: 6 — MANE Select: NM_015926
NM_001129884, NM_001243725, NM_001243726, NM_001243727, NM_001278195, NM_015926
CCDS: CCDS2833, CCDS74945
Canonical transcript exons
ENST00000341333 — 5 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001081263 | 51674271 | 51674562 |
| ENSE00001816617 | 51671252 | 51671288 |
| ENSE00001941477 | 51703724 | 51704323 |
| ENSE00003484638 | 51684413 | 51684634 |
| ENSE00003580570 | 51699406 | 51699574 |
Expression profiles
Bgee: expression breadth ubiquitous, 262 present calls, max score 98.22.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 32.7451 / max 246.7435, expressed in 1820 samples.
FANTOM5 promoters (3 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 36773 | 31.2886 | 1818 |
| 36775 | 0.8709 | 235 |
| 36774 | 0.5856 | 304 |
Top tissues by expression
281 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| left testis | UBERON:0004533 | 98.22 | gold quality |
| right testis | UBERON:0004534 | 98.10 | gold quality |
| right adrenal gland | UBERON:0001233 | 96.20 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 96.16 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 96.14 | gold quality |
| testis | UBERON:0000473 | 96.03 | gold quality |
| left adrenal gland | UBERON:0001234 | 96.02 | gold quality |
| skin of leg | UBERON:0001511 | 95.66 | gold quality |
| granulocyte | CL:0000094 | 95.46 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 95.42 | gold quality |
| adrenal cortex | UBERON:0001235 | 95.27 | gold quality |
| metanephros cortex | UBERON:0010533 | 95.15 | gold quality |
| apex of heart | UBERON:0002098 | 95.07 | gold quality |
| skin of abdomen | UBERON:0001416 | 95.05 | gold quality |
| gall bladder | UBERON:0002110 | 94.74 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 94.62 | gold quality |
| adrenal gland | UBERON:0002369 | 94.61 | gold quality |
| body of stomach | UBERON:0001161 | 94.06 | gold quality |
| minor salivary gland | UBERON:0001830 | 94.05 | gold quality |
| rectum | UBERON:0001052 | 93.99 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 93.98 | gold quality |
| right lobe of liver | UBERON:0001114 | 93.77 | gold quality |
| stromal cell of endometrium | CL:0002255 | 93.70 | gold quality |
| transverse colon | UBERON:0001157 | 93.66 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 93.64 | gold quality |
| right uterine tube | UBERON:0001302 | 93.60 | gold quality |
| saliva-secreting gland | UBERON:0001044 | 93.49 | gold quality |
| zone of skin | UBERON:0000014 | 93.40 | gold quality |
| islet of Langerhans | UBERON:0000006 | 92.91 | gold quality |
| body of pancreas | UBERON:0001150 | 92.88 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 8.83 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
26 targeting TEX264, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-34A-5P | 99.99 | 71.21 | 1784 |
| HSA-MIR-449A | 99.99 | 71.05 | 1776 |
| HSA-MIR-34C-5P | 99.97 | 70.45 | 1577 |
| HSA-MIR-449B-5P | 99.97 | 70.26 | 1580 |
| HSA-MIR-4492 | 99.87 | 68.25 | 3611 |
| HSA-MIR-762 | 99.58 | 66.61 | 1994 |
| HSA-MIR-4677-3P | 99.49 | 67.91 | 1246 |
| HSA-MIR-6081 | 99.48 | 66.07 | 1446 |
| HSA-MIR-4498 | 99.47 | 67.42 | 2360 |
| HSA-MIR-6722-3P | 99.45 | 67.62 | 1919 |
| HSA-MIR-584-3P | 99.35 | 67.69 | 1082 |
| HSA-MIR-3692-5P | 99.29 | 67.04 | 1421 |
| HSA-MIR-361-3P | 99.19 | 66.45 | 1381 |
| HSA-MIR-4292 | 99.16 | 65.57 | 1767 |
| HSA-MIR-6791-5P | 99.16 | 65.92 | 1844 |
| HSA-MIR-5001-5P | 99.05 | 66.76 | 1972 |
| HSA-MIR-1909-3P | 99.03 | 66.56 | 1662 |
| HSA-MIR-3135B | 98.61 | 65.33 | 1470 |
| HSA-MIR-6776-5P | 98.54 | 67.43 | 1304 |
| HSA-MIR-6827-5P | 98.46 | 64.88 | 1256 |
| HSA-MIR-4436B-3P | 98.25 | 65.26 | 1494 |
| HSA-MIR-4778-5P | 97.96 | 68.06 | 1634 |
| HSA-MIR-5007-5P | 97.95 | 64.71 | 614 |
| HSA-MIR-4314 | 97.50 | 67.30 | 1369 |
| HSA-MIR-5192 | 96.89 | 63.35 | 879 |
| HSA-MIR-6861-5P | 96.23 | 67.19 | 800 |
Literature-anchored findings (GeneRIF, showing 4)
- TEX264, an endoplasmic reticulum (ER)resident protein, remodels subdomainsof the ER into ring-like structures inassociation with ATG8 proteins uponnutrient stress, which then fuse withlysosomes for ER turnover. (PMID:31006537)
- A long intrinsically disordered region of TEX264 is required for its ER-phagy receptor function to bridge the gap between the ER and autophagosomal membranes independently of its amino acid sequence. These results suggest that TEX264 is a major ER-phagy receptor. (PMID:31006538)
- TEX264 recognises both unmodified and SUMO1-modifed TOP1 and initiates TOP1cc repair by recruiting p97 and SPRTN. (PMID:32152270)
- TEX264 drives selective autophagy of DNA lesions to promote DNA repair and cell survival. (PMID:39265577)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | tex264a | ENSDARG00000092154 |
| mus_musculus | Tex264 | ENSMUSG00000040813 |
| rattus_norvegicus | Tex264 | ENSRNOG00000013201 |
| caenorhabditis_elegans | WBGENE00305157 |
Protein
Protein identifiers
Testis-expressed protein 264 — Q9Y6I9 (reviewed: Q9Y6I9)
Alternative names: Putative secreted protein Zsig11
All UniProt accessions (7): A0A087WTU3, C9J7N0, C9JHH5, C9JL43, C9JUC3, C9JXQ7, Q9Y6I9
UniProt curated annotations — full annotation on UniProt →
Function. Major reticulophagy (also called ER-phagy) receptor that acts independently of other candidate reticulophagy receptors to remodel subdomains of the endoplasmic reticulum into autophagosomes upon nutrient stress, which then fuse with lysosomes for endoplasmic reticulum turnover. The ATG8-containing isolation membrane (IM) cradles a tubular segment of TEX264-positive ER near a three-way junction, allowing the formation of a synapse of 2 juxtaposed membranes with trans interaction between the TEX264 and ATG8 proteins. Expansion of the IM would extend the capture of ER, possibly through a ‘zipper-like’ process involving continued trans TEX264-ATG8 interactions, until poorly understood mechanisms lead to the fission of relevant membranes and, ultimately, autophagosomal membrane closure. Also involved in the repair of covalent DNA-protein cross-links (DPCs) during DNA synthesis: acts by bridging VCP/p97 to covalent DNA-protein cross-links (DPCs) and initiating resolution of DPCs by SPRTN.
Subunit / interactions. Interacts (via the LIR motif) with ATG8 family proteins MAP1LC3A, MAP1LC3B, GABARAP and GABARAPL1. Interacts with VCP/p97; bridging VCP/p97 to covalent DNA-protein cross-links (DPCs). Interacts with TOP1 (when sumoylated).
Subcellular location. Endoplasmic reticulum membrane. Cytoplasmic vesicle. Autophagosome. Cytoplasm. Cytosol. Nucleus. Chromosome.
Domain organisation. The LIR motif in the cytosol-facing C-terminal region is involved in the interaction with ATG8 proteins. The disordered region is required for autophagosome binding and reticulophagy, probably via bridging the long distance between endoplasmic reticulum and autophagosome membranes, because ribosomes exist on endoplasmic reticulum membranes that attach to autophagic membranes.
RefSeq proteins (6): NP_001123356, NP_001230654, NP_001230655, NP_001230656, NP_001265124, NP_057010* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR011256 | Reg_factor_effector_dom_sf | Homologous_superfamily |
UniProt features (15 total): compositionally biased region 3, topological domain 2, modified residue 2, mutagenesis site 2, chain 1, sequence variant 1, turn 1, transmembrane region 1, region of interest 1, short sequence motif 1
Structure
Experimental structures (PDB)
2 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 7VED | X-RAY DIFFRACTION | 2.02 |
| 7VEC | X-RAY DIFFRACTION | 3 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q9Y6I9-F1 | 76.05 | 0.60 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (2): 244, 239
Mutagenesis-validated functional residues (2):
| Position | Phenotype |
|---|---|
| 273 | completely abolishes the interaction with lc3b. |
| 276 | completely abolishes the interaction with lc3b. |
Function
Pathways and Gene Ontology
Reactome pathways
1 pathways
| ID | Pathway |
|---|---|
| R-HSA-114608 | Platelet degranulation |
MSigDB gene sets: 113 (showing top):
SHEPARD_BMYB_MORPHOLINO_UP, GOCC_VACUOLAR_MEMBRANE, GOCC_SECRETORY_GRANULE, REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION, GOBP_MACROAUTOPHAGY, BLALOCK_ALZHEIMERS_DISEASE_UP, OCT1_03, GOBP_DNA_DAMAGE_RESPONSE, LASTOWSKA_NEUROBLASTOMA_COPY_NUMBER_DN, SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_UP, GOCC_AUTOPHAGOSOME, GOCC_PLATELET_ALPHA_GRANULE, GOCC_SECRETORY_VESICLE, GOCC_VESICLE_LUMEN, GOCC_PLATELET_ALPHA_GRANULE_LUMEN
GO Biological Process (5): reticulophagy (GO:0061709), protein-DNA covalent cross-linking repair (GO:0106300), DNA repair (GO:0006281), autophagy (GO:0006914), DNA damage response (GO:0006974)
GO Molecular Function (2): signaling receptor activity (GO:0038023), protein binding (GO:0005515)
GO Cellular Component (13): autophagosome membrane (GO:0000421), extracellular region (GO:0005576), nucleus (GO:0005634), replication fork (GO:0005657), endoplasmic reticulum (GO:0005783), endoplasmic reticulum membrane (GO:0005789), cytosol (GO:0005829), platelet alpha granule lumen (GO:0031093), chromosome (GO:0005694), cytoplasm (GO:0005737), autophagosome (GO:0005776), membrane (GO:0016020), cytoplasmic vesicle (GO:0031410)
Reactome top-level categories
Rollup of top-1 pathways:
| Category | Pathways |
|---|---|
| Response to elevated platelet cytosolic Ca2+ | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 5 |
| cytoplasm | 3 |
| intracellular membrane-bounded organelle | 2 |
| macroautophagy | 1 |
| DNA repair | 1 |
| DNA metabolic process | 1 |
| DNA damage response | 1 |
| catabolic process | 1 |
| transmembrane transport | 1 |
| process utilizing autophagic mechanism | 1 |
| cellular response to stress | 1 |
| molecular transducer activity | 1 |
| binding | 1 |
| vacuolar membrane | 1 |
| autophagosome | 1 |
| chromosome | 1 |
| endomembrane system | 1 |
| organelle membrane | 1 |
| nuclear outer membrane-endoplasmic reticulum membrane network | 1 |
| endoplasmic reticulum subcompartment | 1 |
| platelet alpha granule | 1 |
| secretory granule lumen | 1 |
| intracellular membraneless organelle | 1 |
| intracellular anatomical structure | 1 |
| vacuole | 1 |
| intracellular vesicle | 1 |
Protein interactions and networks
STRING
856 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| TEX264 | GABARAP | O95166 | 824 |
| TEX264 | CCPG1 | Q9ULG6 | 816 |
| TEX264 | SEC62 | Q99442 | 786 |
| TEX264 | ATL3 | Q6DD88 | 786 |
| TEX264 | RETREG1 | Q9H6L5 | 772 |
| TEX264 | RTN3 | O95197 | 729 |
| TEX264 | GABARAPL2 | P60520 | 704 |
| TEX264 | CALCOCO1 | Q9P1Z2 | 668 |
| TEX264 | CD300C | Q08708 | 581 |
| TEX264 | MAP1LC3B | Q9GZQ8 | 557 |
| TEX264 | RETREG3 | Q86VR2 | 548 |
| TEX264 | TAX1BP1 | Q86VP1 | 518 |
| TEX264 | F5GZY7 | F5GZY7 | 512 |
| TEX264 | RETREG2 | Q8NC44 | 509 |
| TEX264 | NBR1 | Q14596 | 508 |
IntAct
151 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| TMEM79 | TEX264 | psi-mi:“MI:0915”(physical association) | 0.790 |
| TEX264 | TMEM79 | psi-mi:“MI:0915”(physical association) | 0.790 |
| CFTR | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.710 |
| GABARAPL2 | TEX264 | psi-mi:“MI:0915”(physical association) | 0.660 |
| MS4A3 | TEX264 | psi-mi:“MI:0915”(physical association) | 0.600 |
| TEX264 | CERS4 | psi-mi:“MI:0915”(physical association) | 0.560 |
| TEX264 | LHFPL5 | psi-mi:“MI:0915”(physical association) | 0.560 |
| MFF | TEX264 | psi-mi:“MI:0915”(physical association) | 0.560 |
| TEX264 | GPR42 | psi-mi:“MI:0915”(physical association) | 0.560 |
| CLN6 | TEX264 | psi-mi:“MI:0915”(physical association) | 0.560 |
| SLC34A2 | TEX264 | psi-mi:“MI:0915”(physical association) | 0.560 |
| OPRM1 | TEX264 | psi-mi:“MI:0915”(physical association) | 0.560 |
| CREB3L1 | TEX264 | psi-mi:“MI:0915”(physical association) | 0.560 |
| FFAR3 | TEX264 | psi-mi:“MI:0915”(physical association) | 0.560 |
| TEX264 | psi-mi:“MI:0915”(physical association) | 0.560 | |
| GPR42 | TEX264 | psi-mi:“MI:0915”(physical association) | 0.560 |
| ADGRG3 | TEX264 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GJB1 | TEX264 | psi-mi:“MI:0915”(physical association) | 0.560 |
| CERS4 | TEX264 | psi-mi:“MI:0915”(physical association) | 0.560 |
| TM4SF18 | TEX264 | psi-mi:“MI:0915”(physical association) | 0.560 |
BioGRID (280): TMEM79 (Two-hybrid), TEX264 (Affinity Capture-MS), TEX264 (Affinity Capture-MS), CSNK1A1 (Affinity Capture-MS), POTEI (Affinity Capture-MS), CHEK2 (Affinity Capture-MS), SNX14 (Affinity Capture-MS), PNPLA6 (Affinity Capture-MS), PLEKHG4 (Affinity Capture-MS), TYW1B (Affinity Capture-MS), STAT1 (Affinity Capture-MS), PLD1 (Affinity Capture-MS), PLD2 (Affinity Capture-MS), UPK3BL (Affinity Capture-MS), OSBPL8 (Affinity Capture-MS)
ESM2 similar proteins: A0A494C0Z2, A0A494C191, A1L3C1, A2RRU4, A4Q9F3, A6NJR5, A6NLX3, A6NNV3, A6QM06, A6QNT4, D4A6L0, E1BBQ2, E9PGG2, O00255, O60320, O88559, P0DTA3, P0DUD1, P0DUD2, P0DUD3, P0DUD4, P0DUX0, P0DUX1, P0DV79, P29590, P40338, P56726, P97260, Q0P5I0, Q12770, Q14094, Q32L49, Q495Y7, Q5IBH6, Q5MJ68, Q5MNU5, Q5Q9Z2, Q5RDC3, Q5T848, Q69Z89
Diamond homologs: E9Q137, Q9Y6I9
SIGNOR signaling
0 interactions.
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 113 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Macroautophagy | 7 | 11.4× | 7e-04 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| mitophagy | 7 | 23.4× | 5e-06 |
| autophagosome maturation | 6 | 22.2× | 6e-05 |
| autophagosome assembly | 6 | 14.2× | 6e-04 |
| macroautophagy | 5 | 12.7× | 4e-03 |
| adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway | 5 | 11.5× | 6e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
61 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 49 |
| Likely benign | 1 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
1638 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 3:51684408:CCCA:C | acceptor_loss | 1.0000 |
| 3:51684410:CA:C | acceptor_loss | 1.0000 |
| 3:51684411:A:AG | acceptor_gain | 1.0000 |
| 3:51684411:A:G | acceptor_loss | 1.0000 |
| 3:51684412:G:GA | acceptor_loss | 1.0000 |
| 3:51684412:G:GG | acceptor_gain | 1.0000 |
| 3:51684412:GGT:G | acceptor_gain | 1.0000 |
| 3:51684412:GGTGC:G | acceptor_gain | 1.0000 |
| 3:51684632:AAGG:A | donor_loss | 1.0000 |
| 3:51684633:AGG:A | donor_loss | 1.0000 |
| 3:51684635:G:GG | donor_gain | 1.0000 |
| 3:51684635:GTGA:G | donor_loss | 1.0000 |
| 3:51684636:T:G | donor_loss | 1.0000 |
| 3:51703715:T:A | acceptor_gain | 1.0000 |
| 3:51671289:GT:G | donor_loss | 0.9900 |
| 3:51674559:CATGG:C | donor_loss | 0.9900 |
| 3:51674562:GGTAA:G | donor_loss | 0.9900 |
| 3:51674563:G:GG | donor_gain | 0.9900 |
| 3:51674563:GTA:G | donor_loss | 0.9900 |
| 3:51674564:T:G | donor_loss | 0.9900 |
| 3:51684411:AG:A | acceptor_gain | 0.9900 |
| 3:51684411:AGGT:A | acceptor_gain | 0.9900 |
| 3:51684412:GG:G | acceptor_gain | 0.9900 |
| 3:51684412:GGTG:G | acceptor_gain | 0.9900 |
| 3:51703719:CATA:C | acceptor_loss | 0.9900 |
| 3:51703721:TA:T | acceptor_loss | 0.9900 |
| 3:51703723:G:GT | acceptor_loss | 0.9900 |
| 3:51703723:GGA:G | acceptor_gain | 0.9900 |
| 3:51674269:A:AG | acceptor_gain | 0.9800 |
| 3:51674270:G:GG | acceptor_gain | 0.9800 |
AlphaMissense
0 scored. Top likely-pathogenic:
dbSNP variants (sampled 300 via entrez): RS1000052044 (3:51702548 C>G), RS1000111054 (3:51688323 G>A), RS1000215953 (3:51698167 C>T), RS1000217574 (3:51686974 C>T), RS1000223926 (3:51692531 C>G), RS1000478208 (3:51698465 G>A), RS1000573578 (3:51701611 C>T), RS1000592317 (3:51691712 G>A), RS1000729407 (3:51677968 A>T), RS1000774546 (3:51691433 C>T), RS1000838089 (3:51671082 G>A,C), RS1000856631 (3:51674207 C>T), RS1000952261 (3:51670817 A>G), RS1001152234 (3:51687619 C>T), RS1001177939 (3:51693965 A>G)
Disease associations
OMIM: gene MIM:620608 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
0 associations (top):
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL4295994 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
ChEMBL bioactivities
6 potent at pChembl≥5 of 6 total, top 6 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 8.00 | IC50 | 10 | nM | CHEMBL1896972 |
| 7.82 | IC50 | 15 | nM | CHEMBL4861569 |
| 7.28 | Kd | 52.99 | nM | CHEMBL5653589 |
| 7.27 | ED50 | 53.94 | nM | CHEMBL5653589 |
| 5.30 | Kd | 4956 | nM | CHEMBL3752910 |
| 5.30 | ED50 | 5044 | nM | CHEMBL3752910 |
PubChem BioAssay actives
4 with measured affinity, of 7 total; 4 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| [3-[(E)-[(4-anilino-6-morpholin-4-yl-1,3,5-triazin-2-yl)hydrazinylidene]methyl]phenyl] furan-2-carboxylate | 2074093: Inhibition of TEX264 (unknown origin) | ic50 | 0.0100 | uM |
| 5-[benzyl(methyl)sulfamoyl]-4-chloro-2-(furan-2-ylmethylamino)benzoic acid | 2074093: Inhibition of TEX264 (unknown origin) | ic50 | 0.0150 | uM |
| 4-methyl-3-[(2-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2149574: Binding affinity to human TEX264 incubated for 45 mins by Kinobead based pull down assay | kd | 0.0530 | uM |
| 4-methyl-3-[(1-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2149574: Binding affinity to human TEX264 incubated for 45 mins by Kinobead based pull down assay | kd | 4.9556 | uM |
CTD chemical–gene interactions
45 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Benzo(a)pyrene | affects methylation | 2 |
| Phenylmercuric Acetate | affects cotreatment, increases expression | 2 |
| Valproic Acid | increases expression, increases methylation | 2 |
| FR900359 | affects phosphorylation | 1 |
| alpha-pinene | increases oxidation, increases abundance, affects cotreatment | 1 |
| bisphenol A | increases expression | 1 |
| sodium arsenate | decreases expression | 1 |
| sodium arsenite | decreases expression | 1 |
| perfluorooctanoic acid | decreases expression | 1 |
| benzo(e)pyrene | decreases methylation | 1 |
| aflatoxin B2 | increases methylation | 1 |
| nivalenol | increases expression | 1 |
| methacrylaldehyde | increases abundance, affects cotreatment, increases oxidation | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| perfluorooctane sulfonic acid | increases expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| K 7174 | decreases expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, increases expression | 1 |
| dorsomorphin | increases expression, affects cotreatment | 1 |
| bisphenol S | affects expression | 1 |
| jinfukang | affects cotreatment, increases expression | 1 |
| 3-(2-hydroxy-4-(2-methylnonan-2-yl)phenyl)cyclohexan-1-ol | increases expression | 1 |
| bisphenol AF | increases expression | 1 |
| Sunitinib | increases expression | 1 |
| Acrolein | affects cotreatment, increases oxidation, increases abundance | 1 |
| Air Pollutants | affects cotreatment, increases abundance, increases oxidation | 1 |
| Arsenic | affects methylation | 1 |
| Atrazine | increases expression | 1 |
| Vehicle Emissions | affects expression, increases abundance | 1 |
| Cadmium | increases abundance, increases expression | 1 |
ChEMBL screening assays
3 unique, capped per target: 3 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL4118724 | Binding | Binding affinity to TEX264 in human NCI-H23 cells at 1 uM by mass spectrometry based pull down assay | Studies of TAK1-centered polypharmacology with novel covalent TAK1 inhibitors. — Bioorg Med Chem |
Cellosaurus cell lines
9 cell lines: 9 embryonic stem cell
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_D1ID | H9 AAVS1-TRE3G-NGN2 RETREG3-/- RETREG2-/- RETREG1-/- TEX264-/- | Embryonic stem cell | Female |
| CVCL_D1IE | H9 AAVS1-TRE3G-NGN2 RETREG3-/- RETREG2-/- RETREG1-/- TEX264-/- CCPG1-/- | Embryonic stem cell | Female |
| CVCL_D1II | H9 AAVS1-TRE3G-NGN2 TEX264-/- | Embryonic stem cell | Female |
| CVCL_D1IV | H9 AAVS1-TRE3G-NGN2 RETREG3-/- RETREG2-/- RETREG1-/- TEX264-/- Keima-RAMP4 | Embryonic stem cell | Female |
| CVCL_D1IW | H9 AAVS1-TRE3G-NGN2 RETREG3-/- RETREG2-/- RETREG1-/- TEX264-/- Keima-REEP5 | Embryonic stem cell | Female |
| CVCL_D1IX | H9 AAVS1-TRE3G-NGN2 RETREG3-/- RETREG2-/- RETREG1-/- TEX264-/- CCPG1-/- Keima-RAMP4 | Embryonic stem cell | Female |
| CVCL_D1IY | H9 AAVS1-TRE3G-NGN2 RETREG3-/- RETREG2-/- RETREG1-/- TEX264-/- CCPG1-/- Keima-REEP5 | Embryonic stem cell | Female |
| CVCL_D1IZ | H9 AAVS1-TRE3G-NGN2 TEX264-/- Keima-RAMP4 | Embryonic stem cell | Female |
| CVCL_D1J0 | H9 AAVS1-TRE3G-NGN2 TEX264-/- Keima-REEP5 | Embryonic stem cell | Female |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.