TFIP11-DT

Summary

TFIP11-DT (TFIP11 divergent transcript, HGNC:55374) is a long non-coding RNA gene on chromosome 22q12.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55374
Approved symbol	TFIP11-DT
Name	TFIP11 divergent transcript
Location	22q12.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000261188
Ensembl biotype	lncRNA
Entrez	100507599
RNAcentral	URS0000A76908 — lncRNA, 1673 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000565764, ENST00000566814, ENST00000758994

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000565764 — 2 exons

Exon	Start	End
ENSE00002617801	26513412	26514568
ENSE00003985130	26512522	26513034

Expression profiles

Bgee: expression breadth ubiquitous, 194 present calls, max score 88.24.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 2.4580 / max 143.5361, expressed in 1107 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
191508	2.4580	1107

Top tissues by expression

241 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
bronchial epithelial cell	CL:0002328	88.24	gold quality
Brodmann (1909) area 23	UBERON:0013554	88.07	gold quality
bronchus	UBERON:0002185	86.82	gold quality
endothelial cell	CL:0000115	85.61	silver quality
middle temporal gyrus	UBERON:0002771	85.43	gold quality
epithelial cell of pancreas	CL:0000083	83.78	silver quality
right uterine tube	UBERON:0001302	82.22	gold quality
nucleus accumbens	UBERON:0001882	81.26	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.15	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	80.54	gold quality
primary visual cortex	UBERON:0002436	80.17	gold quality
caudate nucleus	UBERON:0001873	79.55	gold quality
pituitary gland	UBERON:0000007	78.95	gold quality
adenohypophysis	UBERON:0002196	78.86	gold quality
putamen	UBERON:0001874	78.74	gold quality
oviduct epithelium	UBERON:0004804	78.09	gold quality
caput epididymis	UBERON:0004358	77.64	gold quality
cortical plate	UBERON:0005343	77.62	gold quality
cerebellar cortex	UBERON:0002129	77.60	gold quality
cerebellar hemisphere	UBERON:0002245	77.59	gold quality
hypothalamus	UBERON:0001898	77.48	gold quality
right frontal lobe	UBERON:0002810	77.23	gold quality
right hemisphere of cerebellum	UBERON:0014890	77.19	gold quality
anterior cingulate cortex	UBERON:0009835	77.18	gold quality
cerebellum	UBERON:0002037	77.15	gold quality
germinal epithelium of ovary	UBERON:0001304	76.81	silver quality
Brodmann (1909) area 9	UBERON:0013540	76.76	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	76.72	gold quality
tendon of biceps brachii	UBERON:0008188	76.54	silver quality
epithelium of nasopharynx	UBERON:0001951	76.47	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.95

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.