THY1-AS1

Summary

THY1-AS1 (THY1 antisense RNA 1, HGNC:54852) is a long non-coding RNA gene on chromosome 11q23.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:54852
Approved symbol	THY1-AS1
Name	THY1 antisense RNA 1
Location	11q23.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	RP11-334E6.12
Ensembl gene	ENSG00000263873
Ensembl biotype	lncRNA
Entrez	117134602
RNAcentral	URS00004A7C3C — lncRNA, 632 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000578216

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000578216 — 2 exons

Exon	Start	End
ENSE00002700213	119418667	119419114
ENSE00002706104	119417951	119418134

Expression profiles

Bgee: expression breadth ubiquitous, 129 present calls, max score 99.30.

Top tissues by expression

129 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
superior frontal gyrus	UBERON:0002661	99.30	gold quality
prefrontal cortex	UBERON:0000451	99.00	gold quality
primary visual cortex	UBERON:0002436	98.68	gold quality
frontal cortex	UBERON:0001870	98.57	gold quality
Brodmann (1909) area 9	UBERON:0013540	97.89	gold quality
stromal cell of endometrium	CL:0002255	97.86	gold quality
right frontal lobe	UBERON:0002810	97.86	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	97.49	gold quality
cerebral cortex	UBERON:0000956	96.76	gold quality
nucleus accumbens	UBERON:0001882	95.84	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	95.44	gold quality
vermiform appendix	UBERON:0001154	95.44	gold quality
putamen	UBERON:0001874	94.89	gold quality
anterior cingulate cortex	UBERON:0009835	94.86	gold quality
smooth muscle tissue	UBERON:0001135	94.64	gold quality
gall bladder	UBERON:0002110	94.42	gold quality
hypothalamus	UBERON:0001898	94.16	gold quality
metanephros cortex	UBERON:0010533	94.07	gold quality
right hemisphere of cerebellum	UBERON:0014890	94.02	gold quality
cortical plate	UBERON:0005343	93.84	gold quality
caudate nucleus	UBERON:0001873	93.80	gold quality
placenta	UBERON:0001987	93.65	gold quality
brain	UBERON:0000955	93.64	gold quality
Ammon’s horn	UBERON:0001954	93.19	gold quality
cerebellum	UBERON:0002037	92.09	gold quality
cerebellar cortex	UBERON:0002129	91.98	gold quality
adult mammalian kidney	UBERON:0000082	91.91	gold quality
cerebellar hemisphere	UBERON:0002245	91.87	gold quality
temporal lobe	UBERON:0001871	91.82	gold quality
amygdala	UBERON:0001876	91.69	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.00

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.