TIMM44
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Also known as TIM44
Summary
TIMM44 (translocase of inner mitochondrial membrane 44, HGNC:17316) is a protein-coding gene on chromosome 19p13.2, encoding Mitochondrial import inner membrane translocase subunit TIM44 (O43615). Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. It is a selective cancer dependency (DepMap: 88.8% of cell lines).
This gene encodes a peripheral membrane protein associated with the mitochondrial inner membrane translocase, which functions in the import of proteins across the mitochondrial inner membrane and into the mitochondrial matrix. The encoded protein mediates binding of mitochondrial heat shock protein 70 to the translocase of inner mitochondrial membrane 23 (TIM23) complex. Expression of this gene is upregulated in kidney in a mouse model of diabetes. A mutation in this gene is associated with familial oncocytic thyroid carcinoma.
Source: NCBI Gene 10469 — RefSeq curated summary.
At a glance
- Gene–disease (curated): thyroid cancer (Limited, GenCC)
- Clinical variants (ClinVar): 134 total
- Druggable target: yes
- Cancer dependency (DepMap): dependent in 88.8% of screened cell lines
- MANE Select transcript:
NM_006351
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:17316 |
| Approved symbol | TIMM44 |
| Name | translocase of inner mitochondrial membrane 44 |
| Location | 19p13.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | TIM44 |
| Ensembl gene | ENSG00000104980 |
| Ensembl biotype | protein_coding |
| OMIM | 605058 |
| Entrez | 10469 |
Gene structure
Transcript identifiers
Ensembl transcripts: 20 — 11 protein_coding, 6 retained_intron, 2 nonsense_mediated_decay, 1 protein_coding_CDS_not_defined
ENST00000270538, ENST00000595565, ENST00000595831, ENST00000595876, ENST00000597926, ENST00000598481, ENST00000598675, ENST00000598968, ENST00000599650, ENST00000599939, ENST00000600000, ENST00000600748, ENST00000870121, ENST00000870122, ENST00000923643, ENST00000923644, ENST00000923645, ENST00000923646, ENST00000957537, ENST00000957538
RefSeq mRNA: 1 — MANE Select: NM_006351
NM_006351
CCDS: CCDS12192
Canonical transcript exons
ENST00000270538 — 13 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001315547 | 7943607 | 7943666 |
| ENSE00003082973 | 7926718 | 7927306 |
| ENSE00003468427 | 7931138 | 7931188 |
| ENSE00003493387 | 7935065 | 7935145 |
| ENSE00003536257 | 7932840 | 7932932 |
| ENSE00003544510 | 7941102 | 7941197 |
| ENSE00003572157 | 7928077 | 7928166 |
| ENSE00003578383 | 7938027 | 7938197 |
| ENSE00003601071 | 7933864 | 7934003 |
| ENSE00003647413 | 7933485 | 7933570 |
| ENSE00003650030 | 7932627 | 7932751 |
| ENSE00003664263 | 7934089 | 7934238 |
| ENSE00003675207 | 7927657 | 7927767 |
Expression profiles
Bgee: expression breadth ubiquitous, 263 present calls, max score 96.52.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 42.9096 / max 305.5722, expressed in 1811 samples.
FANTOM5 promoters (3 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 178923 | 37.7359 | 1809 |
| 178924 | 4.4772 | 1563 |
| 178922 | 0.6965 | 350 |
Top tissues by expression
287 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| apex of heart | UBERON:0002098 | 96.52 | gold quality |
| gastrocnemius | UBERON:0001388 | 95.83 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 95.75 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 95.57 | gold quality |
| muscle of leg | UBERON:0001383 | 95.55 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 95.55 | gold quality |
| lower esophagus muscularis layer | UBERON:0035833 | 95.50 | gold quality |
| lower esophagus | UBERON:0013473 | 95.48 | gold quality |
| cerebellar cortex | UBERON:0002129 | 95.35 | gold quality |
| esophagogastric junction muscularis propria | UBERON:0035841 | 95.27 | gold quality |
| body of uterus | UBERON:0009853 | 94.95 | gold quality |
| heart left ventricle | UBERON:0002084 | 94.89 | gold quality |
| right ovary | UBERON:0002118 | 94.85 | gold quality |
| left ovary | UBERON:0002119 | 94.85 | gold quality |
| endocervix | UBERON:0000458 | 94.81 | gold quality |
| mucosa of stomach | UBERON:0001199 | 94.78 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 94.75 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 94.67 | gold quality |
| right atrium auricular region | UBERON:0006631 | 94.61 | gold quality |
| cardiac ventricle | UBERON:0002082 | 94.48 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 94.31 | gold quality |
| popliteal artery | UBERON:0002250 | 94.26 | gold quality |
| tibial artery | UBERON:0007610 | 94.26 | gold quality |
| ectocervix | UBERON:0012249 | 94.23 | gold quality |
| transverse colon | UBERON:0001157 | 94.19 | gold quality |
| right lobe of liver | UBERON:0001114 | 94.10 | gold quality |
| left uterine tube | UBERON:0001303 | 93.99 | gold quality |
| skin of leg | UBERON:0001511 | 93.99 | gold quality |
| adenohypophysis | UBERON:0002196 | 93.87 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 93.67 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 6.46 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
5 targeting TIMM44, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6077 | 99.99 | 68.04 | 2299 |
| HSA-MIR-1208 | 99.70 | 68.28 | 1533 |
| HSA-MIR-4796-3P | 99.08 | 68.38 | 1681 |
| HSA-MIR-6889-3P | 98.84 | 67.35 | 1198 |
| HSA-MIR-4535 | 97.27 | 65.17 | 469 |
Functional genomics
DepMap (CRISPR cell-line fitness): dependent in 88.8% of screened cell lines.
Literature-anchored findings (GeneRIF, showing 7)
- This protein has been found differentially expressed in thalami from patients with schizophrenia. (PMID:20471030)
- The Timm44 gene may be a new target for the treatment of type 2 diabetes (PMID:25749183)
- TIM44 was identified for the first time as a potential oncogene, which plays an important role in autophagy through the TIM44-SOD2-ROS-mTOR pathway. (PMID:27849558)
- HuR Promotes Ovarian Cancer Cell Proliferation by Regulating TIMM44 mRNA Stability. (PMID:32901414)
- TIMM44 is a potential therapeutic target of human glioma. (PMID:36438483)
- The mitochondrial protein TIMM44 is required for angiogenesis in vitro and in vivo. (PMID:37147302)
- A first-in-class TIMM44 blocker inhibits bladder cancer cell growth. (PMID:38467612)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | timm44 | ENSDARG00000104771 |
| mus_musculus | Timm44 | ENSMUSG00000002949 |
| rattus_norvegicus | Timm44 | ENSRNOG00000001058 |
| drosophila_melanogaster | CG11779 | FBGN0038683 |
| caenorhabditis_elegans | tin-44 | WBGENE00020383 |
Protein
Protein identifiers
Mitochondrial import inner membrane translocase subunit TIM44 — O43615 (reviewed: O43615)
All UniProt accessions (5): O43615, M0QXM9, M0QXU7, M0R124, M0R301
UniProt curated annotations — full annotation on UniProt →
Function. Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. Recruits mitochondrial HSP70 to drive protein translocation into the matrix using ATP as an energy source.
Subunit / interactions. Probable component of the PAM complex at least composed of a mitochondrial HSP70 protein, GRPEL1 or GRPEL2, TIMM44, TIMM16/PAM16 and TIMM14/DNAJC19. The complex interacts with the TIMM23 component of the TIM23 complex. Interacts with SLC25A4/ANT1 and SLC25A5/ANT2; leading to inhibit the presequence translocase TIMM23, thereby promoting stabilization of PINK1.
Subcellular location. Mitochondrion inner membrane. Mitochondrion matrix.
Similarity. Belongs to the Tim44 family.
RefSeq proteins (1): NP_006342* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR007379 | Tim44-like_dom | Domain |
| IPR017303 | Tim44 | Family |
| IPR032710 | NTF2-like_dom_sf | Homologous_superfamily |
| IPR039544 | Tim44-like | Family |
Pfam: PF04280
UniProt features (21 total): helix 7, strand 6, modified residue 3, sequence conflict 2, transit peptide 1, chain 1, binding site 1
Structure
Experimental structures (PDB)
1 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 2CW9 | X-RAY DIFFRACTION | 1.9 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-O43615-F1 | 64.39 | 0.20 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (1): 166–173
Post-translational modifications (3): 128, 180, 217
Function
Pathways and Gene Ontology
Reactome pathways
1 pathways
| ID | Pathway |
|---|---|
| R-HSA-1268020 | Mitochondrial protein import |
MSigDB gene sets: 159 (showing top):
GOBP_INTRACELLULAR_PROTEIN_TRANSPORT, ENK_UV_RESPONSE_KERATINOCYTE_UP, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN, GRAESSMANN_RESPONSE_TO_MC_AND_DOXORUBICIN_DN, GOBP_PROTEIN_TARGETING, LANG_MYB_FAMILY_TARGETS, TGACCTY_ERR1_Q2, GOBP_ESTABLISHMENT_OF_PROTEIN_LOCALIZATION_TO_ORGANELLE, BLALOCK_ALZHEIMERS_DISEASE_UP, GOCC_MITOCHONDRIAL_ENVELOPE, GOBP_PROTEIN_LOCALIZATION_TO_ORGANELLE, RYTTCCTG_ETS2_B, GOBP_PROTEIN_TRANSMEMBRANE_TRANSPORT, GOBP_PROTEIN_LOCALIZATION_TO_MITOCHONDRION, GOBP_PROTEIN_TARGETING_TO_MITOCHONDRION
GO Biological Process (5): obsolete protein targeting to mitochondrion (GO:0006626), intracellular protein transport (GO:0006886), protein import into mitochondrial matrix (GO:0030150), protein transport (GO:0015031), establishment of protein localization (GO:0045184)
GO Molecular Function (4): ATP binding (GO:0005524), protein-folding chaperone binding (GO:0051087), nucleotide binding (GO:0000166), protein binding (GO:0005515)
GO Cellular Component (6): fibrillar center (GO:0001650), mitochondrion (GO:0005739), mitochondrial inner membrane (GO:0005743), TIM23 mitochondrial import inner membrane translocase complex (GO:0005744), mitochondrial matrix (GO:0005759), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-1 pathways:
| Category | Pathways |
|---|---|
| Protein localization | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| intracellular protein localization | 2 |
| cellular anatomical structure | 2 |
| protein transport | 1 |
| intracellular transport | 1 |
| protein transmembrane import into intracellular organelle | 1 |
| protein localization to mitochondrion | 1 |
| import into the mitochondrion | 1 |
| mitochondrial protein import pathway | 1 |
| transport | 1 |
| establishment of protein localization | 1 |
| establishment of localization | 1 |
| adenyl ribonucleotide binding | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| protein binding | 1 |
| nucleoside phosphate binding | 1 |
| heterocyclic compound binding | 1 |
| binding | 1 |
| nucleolus | 1 |
| cytoplasm | 1 |
| intracellular membrane-bounded organelle | 1 |
| organelle inner membrane | 1 |
| mitochondrial membrane | 1 |
| inner mitochondrial membrane protein complex | 1 |
| mitochondrion | 1 |
| intracellular organelle lumen | 1 |
Protein interactions and networks
STRING
1778 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| TIMM44 | TIMM17A | Q99595 | 997 |
| TIMM44 | HSPA9 | P30036 | 996 |
| TIMM44 | DNAJC19 | Q96DA6 | 996 |
| TIMM44 | HSPA4 | P34932 | 991 |
| TIMM44 | PAM16 | Q9Y3D7 | 981 |
| TIMM44 | GRPEL1 | Q9HAV7 | 971 |
| TIMM44 | TIMM50 | Q3ZCQ8 | 941 |
| TIMM44 | TOMM70 | O94826 | 916 |
| TIMM44 | TIMM21 | Q9BVV7 | 910 |
| TIMM44 | TIMM10 | P62072 | 897 |
| TIMM44 | TOMM40 | O96008 | 867 |
| TIMM44 | TOMM22 | Q9NS69 | 851 |
| TIMM44 | TIMM23 | O14925 | 849 |
| TIMM44 | DNAJC15 | Q9Y5T4 | 817 |
| TIMM44 | TIMM22 | Q9Y584 | 750 |
IntAct
149 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| NDUFS3 | NDUFS8 | psi-mi:“MI:0914”(association) | 0.730 |
| CFTR | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.710 |
| IGF1R | PIK3R2 | psi-mi:“MI:2364”(proximity) | 0.590 |
| CMTM5 | TIMM44 | psi-mi:“MI:0915”(physical association) | 0.560 |
| TIMM44 | CMTM5 | psi-mi:“MI:0915”(physical association) | 0.560 |
| TIMM44 | UBASH3A | psi-mi:“MI:0915”(physical association) | 0.560 |
| TIMM44 | CCDC57 | psi-mi:“MI:0915”(physical association) | 0.560 |
| TIMM44 | SFT2D2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| DR1 | TIMM44 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GTF2B | TIMM44 | psi-mi:“MI:0915”(physical association) | 0.560 |
| TIMM44 | GTF3C3 | psi-mi:“MI:0915”(physical association) | 0.560 |
| TIMM44 | COL1A1 | psi-mi:“MI:0914”(association) | 0.530 |
| AARS1 | TIMM44 | psi-mi:“MI:0915”(physical association) | 0.400 |
| OPCML | TIMM44 | psi-mi:“MI:0915”(physical association) | 0.400 |
| EFHC1 | TIMM44 | psi-mi:“MI:0915”(physical association) | 0.400 |
| ARAF | TIMM44 | psi-mi:“MI:0915”(physical association) | 0.370 |
BioGRID (294): CMTM5 (Two-hybrid), TIMM44 (Affinity Capture-Western), TIMM44 (Co-fractionation), TIMM44 (Co-fractionation), TIMM44 (Affinity Capture-MS), HSPA9 (Reconstituted Complex), TIMM44 (Affinity Capture-MS), TIMM44 (Affinity Capture-MS), TIMM44 (Affinity Capture-MS), TIMM44 (Affinity Capture-MS), TIMM44 (Affinity Capture-MS), TIMM44 (Affinity Capture-MS), TIMM44 (Affinity Capture-MS), TIMM44 (Affinity Capture-MS), TIMM44 (Affinity Capture-MS)
ESM2 similar proteins: A2RVP7, A2VDV9, A4IFL0, O14925, O35093, O35094, O35857, O43615, O60830, P0CR88, P0CR89, P59670, Q02921, Q2HJE9, Q2KHV4, Q2UAP8, Q38820, Q3B8P0, Q3ZBE6, Q4V8S3, Q5BIN4, Q5M7K0, Q5R5H4, Q5RDD0, Q5REX0, Q5SRD1, Q5U4F4, Q5U4U5, Q5XH94, Q5XJY4, Q5ZLL0, Q6BZY4, Q6GQ39, Q6INU6, Q6NWD4, Q7T2P6, Q86UB9, Q9C1E8, Q9CQ85, Q9CYV5
Diamond homologs: O02161, O35094, O35857, O43615
SIGNOR signaling
1 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| TIMM44 | “form complex” | “TIM23 complex” | binding |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 133 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| peptidyl-tyrosine phosphorylation | 5 | 17.7× | 2e-03 |
| cell surface receptor protein tyrosine kinase signaling pathway | 8 | 11.7× | 2e-04 |
| protein autophosphorylation | 9 | 11.0× | 1e-04 |
| positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction | 11 | 7.2× | 2e-04 |
| positive regulation of MAPK cascade | 9 | 6.1× | 4e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
134 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 79 |
| Likely benign | 7 |
| Benign | 30 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
2571 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 19:7927302:TTGTC:T | acceptor_gain | 1.0000 |
| 19:7927303:TGTC:T | acceptor_gain | 1.0000 |
| 19:7927304:GTC:G | acceptor_gain | 1.0000 |
| 19:7927305:TC:T | acceptor_gain | 1.0000 |
| 19:7927306:CC:C | acceptor_gain | 1.0000 |
| 19:7927307:C:CC | acceptor_gain | 1.0000 |
| 19:7927307:C:CG | acceptor_loss | 1.0000 |
| 19:7927310:C:CT | acceptor_gain | 1.0000 |
| 19:7927314:G:C | acceptor_gain | 1.0000 |
| 19:7927314:G:GC | acceptor_gain | 1.0000 |
| 19:7927695:C:CT | donor_gain | 1.0000 |
| 19:7927764:CCAG:C | acceptor_gain | 1.0000 |
| 19:7927765:CAG:C | acceptor_gain | 1.0000 |
| 19:7927765:CAGC:C | acceptor_gain | 1.0000 |
| 19:7927768:C:CC | acceptor_gain | 1.0000 |
| 19:7927780:C:CT | acceptor_gain | 1.0000 |
| 19:7928075:A:AC | donor_gain | 1.0000 |
| 19:7928076:C:CC | donor_gain | 1.0000 |
| 19:7928076:CGT:C | donor_gain | 1.0000 |
| 19:7931136:A:AC | donor_gain | 1.0000 |
| 19:7931137:C:CC | donor_gain | 1.0000 |
| 19:7931137:CAG:C | donor_gain | 1.0000 |
| 19:7932624:CAC:C | donor_loss | 1.0000 |
| 19:7932747:GCCCC:G | acceptor_gain | 1.0000 |
| 19:7932748:CCCC:C | acceptor_gain | 1.0000 |
| 19:7932748:CCCCC:C | acceptor_gain | 1.0000 |
| 19:7932749:CCC:C | acceptor_gain | 1.0000 |
| 19:7932749:CCCC:C | acceptor_gain | 1.0000 |
| 19:7932750:CC:C | acceptor_gain | 1.0000 |
| 19:7932750:CCC:C | acceptor_gain | 1.0000 |
AlphaMissense
2966 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 19:7927234:A:G | W438R | 1.000 |
| 19:7927234:A:T | W438R | 1.000 |
| 19:7927279:A:G | W423R | 0.999 |
| 19:7927279:A:T | W423R | 0.999 |
| 19:7931152:A:G | W342R | 0.999 |
| 19:7931152:A:T | W342R | 0.999 |
| 19:7927230:C:G | R439P | 0.998 |
| 19:7927730:A:G | L389P | 0.998 |
| 19:7932670:A:G | F315S | 0.998 |
| 19:7938077:C:G | A88P | 0.998 |
| 19:7927232:C:A | W438C | 0.997 |
| 19:7927232:C:G | W438C | 0.997 |
| 19:7927236:G:T | A437D | 0.997 |
| 19:7931147:G:C | C343W | 0.997 |
| 19:7931149:A:G | C343R | 0.997 |
| 19:7931188:C:G | A330P | 0.997 |
| 19:7933917:T:A | R210S | 0.997 |
| 19:7933917:T:G | R210S | 0.997 |
| 19:7933918:C:G | R210T | 0.997 |
| 19:7927233:C:G | W438S | 0.996 |
| 19:7927272:A:G | L425P | 0.996 |
| 19:7927733:A:T | V388E | 0.996 |
| 19:7927757:C:T | G380D | 0.996 |
| 19:7927758:C:G | G380R | 0.996 |
| 19:7931160:A:T | L339H | 0.996 |
| 19:7932631:A:G | L328P | 0.996 |
| 19:7932659:A:G | C319R | 0.996 |
| 19:7932684:A:C | F310L | 0.996 |
| 19:7932684:A:T | F310L | 0.996 |
| 19:7932686:A:G | F310L | 0.996 |
dbSNP variants (sampled 300 via entrez): RS1000107836 (19:7935184 T>C), RS1000211943 (19:7929453 C>T), RS1000558560 (19:7928414 T>C), RS1000583562 (19:7943549 T>C,G), RS1000748715 (19:7937835 T>C), RS1000884394 (19:7943441 C>A,T), RS1000936266 (19:7943662 C>A,G,T), RS1001687548 (19:7933739 G>A,C), RS1001807507 (19:7939194 T>C,G), RS1001886298 (19:7944541 G>A), RS1001886873 (19:7928963 C>A,G,T), RS1001911361 (19:7929285 G>A), RS1001938849 (19:7944836 G>A), RS1002066 (19:7945050 A>G), RS1002153523 (19:7938926 G>T)
Disease associations
OMIM: gene MIM:605058 | disease phenotypes:
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| thyroid cancer | Limited | Autosomal dominant |
Mondo (1): thyroid cancer (MONDO:0002108)
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
0 associations (top):
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL6066349 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
ChEMBL bioactivities
4 potent at pChembl≥5 of 4 total, top 4 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 6.51 | Kd | 309.9 | nM | CHEMBL5653589 |
| 6.51 | ED50 | 309.9 | nM | CHEMBL5653589 |
| 6.35 | Kd | 445 | nM | CHEMBL3752910 |
| 6.35 | ED50 | 445 | nM | CHEMBL3752910 |
PubChem BioAssay actives
2 with measured affinity, of 4 total; 2 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 4-methyl-3-[(2-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2149589: Binding affinity to human TIMM44 incubated for 45 mins by Kinobead based pull down assay | kd | 0.3099 | uM |
| 4-methyl-3-[(1-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2149589: Binding affinity to human TIMM44 incubated for 45 mins by Kinobead based pull down assay | kd | 0.4450 | uM |
CTD chemical–gene interactions
48 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| entinostat | affects cotreatment, increases expression | 2 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | increases expression, affects cotreatment, decreases expression | 2 |
| Leflunomide | decreases expression | 2 |
| Arsenic | affects methylation, affects cotreatment, increases abundance, increases expression | 2 |
| Tunicamycin | increases expression | 2 |
| Valproic Acid | affects expression, increases methylation | 2 |
| Thapsigargin | decreases expression, increases expression | 2 |
| Particulate Matter | affects cotreatment, increases abundance, increases expression, decreases expression | 2 |
| aristolochic acid I | increases expression | 1 |
| FR900359 | increases phosphorylation | 1 |
| bisphenol F | increases expression | 1 |
| alpha-pinene | increases abundance, affects cotreatment, decreases expression, increases oxidation | 1 |
| bisphenol A | affects expression | 1 |
| sodium arsenite | affects cotreatment, increases abundance, increases expression | 1 |
| manganese chloride | affects cotreatment, increases abundance, increases expression | 1 |
| aflatoxin B2 | increases methylation | 1 |
| methacrylaldehyde | affects cotreatment, decreases expression, increases oxidation, increases abundance | 1 |
| perfluoro-n-nonanoic acid | increases expression | 1 |
| bisphenol B | increases expression | 1 |
| abrine | increases expression | 1 |
| dorsomorphin | affects cotreatment, increases expression | 1 |
| LDN 193189 | affects cotreatment, decreases expression | 1 |
| bisphenol AF | increases expression | 1 |
| Sunitinib | increases expression | 1 |
| Acetaminophen | decreases expression | 1 |
| Acrolein | affects cotreatment, decreases expression, increases oxidation, increases abundance | 1 |
| Air Pollutants | increases oxidation, affects cotreatment, decreases expression, increases abundance | 1 |
| Ethanol | affects cotreatment, increases abundance, increases expression | 1 |
| Benzo(a)pyrene | increases methylation | 1 |
| Cisplatin | decreases expression | 1 |
ChEMBL screening assays
1 unique, capped per target: 1 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL5652631 | Binding | Binding affinity to human TIMM44 incubated for 45 mins by Kinobead based pull down assay | NVP-BHG712: Effects of Regioisomers on the Affinity and Selectivity toward the EPHrin Family. — ChemMedChem |
Clinical trials (associated diseases)
300 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00604318 | PHASE4 | COMPLETED | Quality of Life, Recombinant TSH (Thyrogen) and Thyroid Cancer |
| NCT01496313 | PHASE4 | COMPLETED | To Compare The Effects Of Two Doses Of Vandetanib In Patients With Advanced Medullary Thyroid Cancer |
| NCT02946918 | PHASE4 | TERMINATED | Levothyroxine Replacement With Liquid Gel Capsules vs Tablets Post-thyroidectomy |
| NCT03065218 | PHASE4 | TERMINATED | 99mTc Sestamibi Scans In Thyroglobulin Positive Scan Negative Differentiated Thyroid Cancer (DTC) Patients |
| NCT03469310 | PHASE4 | COMPLETED | Minimizing Narcotic Analgesics After Endocrine Surgery |
| NCT03969108 | PHASE4 | COMPLETED | Diagnostic Accuracy Study of Indocyanine Green for Parathyroid Perfusion Assessment |
| NCT06697782 | PHASE4 | COMPLETED | Aprepitant and Ondansetron Monotherapy or Combination for Postoperative Nausea and Vomiting in Thyroid Cancer |
| NCT07600580 | PHASE4 | ACTIVE_NOT_RECRUITING | The Association Between Bilateral Intermediate Cervical Plexus Block During Total Thyroidectomy and Surgical Stress Response |
| NCT00410761 | PHASE3 | COMPLETED | An Efficacy Study Comparing ZD6474 to Placebo in Medullary Thyroid Cancer |
| NCT00435851 | PHASE3 | UNKNOWN | Medico-Economic Comparison of Four Strategies of Radioiodine Ablation in Thyroid Carcinoma Patients |
| NCT00704730 | PHASE3 | COMPLETED | Efficacy of XL184 (Cabozantinib) in Advanced Medullary Thyroid Cancer |
| NCT00794053 | PHASE3 | COMPLETED | The Usefulness of Staining Lymph Nodes During Operations for Cancer Thyroid in Detecting the Nodes That Have Cancer |
| NCT00795782 | PHASE3 | COMPLETED | Prophylactic Central Lymph Node Dissection in Papillary Thyroid Microcarcinoma |
| NCT01321554 | PHASE3 | COMPLETED | A Multicenter, Randomized, Double-Blind, Placebo-Controlled, Trial of Lenvatinib (E7080) in 131I-Refractory Differentiated Thyroid Cancer (DTC) |
| NCT03570021 | PHASE3 | ACTIVE_NOT_RECRUITING | ESTIMation of the ABiLity of Prophylactic Central Compartment Neck Dissection to Modify Outcomes in Low-risk Differentiated Thyroid Cancer |
| NCT04290663 | PHASE3 | RECRUITING | Systematic Radioiodine Administration Versus Decision of Radioiodine Treatment Guided by a Post-operative Work-up |
| NCT05468554 | PHASE3 | UNKNOWN | Evaluation of Metformin Effect on the Fertility of Women Treated With 131I for Thyroid Cancer |
| NCT05999630 | PHASE3 | RECRUITING | Artificial Tears to Prevent Nasolacrimal Duct Obstruction in Patients Treated With Radioactive Iodine for Thyroid Cancer |
| NCT06082180 | PHASE3 | RECRUITING | A Prospective, Open-label, Multicenter, Randomized Controlled Phase III Study of Prophylactic Central Neck Dissection in Low-risk Papillary Thyroid Cancer |
| NCT06554652 | PHASE3 | RECRUITING | Selective Neck Dissection Versus Modified Neck Dissection in PTC |
| NCT06558981 | PHASE3 | RECRUITING | Adjuvant Radiotherapy in High Risk Locally Advanced DTC |
| NCT06860971 | PHASE3 | RECRUITING | A Study of AL2846 Capsule Versus Placebo in the Treatment of Advanced Radioiodine-Refractory Differentiated Thyroid Carcinoma |
| NCT00080574 | PHASE2 | COMPLETED | The Effect of Thyroid Hormone on Drug Elimination in Cancer Patients |
| NCT00085293 | PHASE2 | COMPLETED | Decitabine in Treating Patients With Metastatic Papillary Thyroid Cancer or Follicular Thyroid Cancer Unresponsive to Iodine I 131 |
| NCT00095693 | PHASE2 | TERMINATED | Sorafenib Tosylate in Treating Patients With Locally Advanced, Metastatic, or Locally Recurrent Thyroid Cancer |
| NCT00098345 | PHASE2 | COMPLETED | Efficacy and Tolerability of ZD6474 in Patients With Thyroid Cancer |
| NCT00098813 | PHASE2 | COMPLETED | Romidepsin in Treating Patients With Recurrent and/or Metastatic Thyroid Cancer That Has Not Responded to Radioactive Iodine |
| NCT00104871 | PHASE2 | COMPLETED | Bortezomib in Treating Patients With Metastatic Thyroid Cancer That Did Not Respond to Radioactive Iodine Therapy |
| NCT00115739 | PHASE2 | TERMINATED | Trial Evaluating Gleevec in Patients With Anaplastic Thyroid Carcinoma |
| NCT00118248 | PHASE2 | COMPLETED | Tanespimycin in Treating Patients With Inoperable Locoregionally Advanced or Metastatic Thyroid Cancer |
| NCT00121628 | PHASE2 | COMPLETED | A Phase 2, Open-label Study of AMG 706 to Treat Subjects With Locally Advanced or Metastatic Thyroid Cancer |
| NCT00124527 | PHASE2 | COMPLETED | Study of Irofulven Plus Capecitabine in Patients With Advanced Thyroid Cancer |
| NCT00126568 | PHASE2 | TERMINATED | Sorafenib in Treating Patients With Advanced Anaplastic Thyroid Cancer |
| NCT00134043 | PHASE2 | COMPLETED | Suberoylanilide Hydroxamic Acid in Treating Patients With Metastatic and/or Locally Advanced or Locally Recurrent Thyroid Cancer |
| NCT00176748 | PHASE2 | COMPLETED | Treatment for Patients With Metastatic Thyroid Cancer |
| NCT00181168 | PHASE2 | COMPLETED | Recombinant Thyrotropin PET-CT Fusion Scanning in Thyroid Cancer |
| NCT00251316 | PHASE2 | COMPLETED | Effect of Lithium Carbonate on Low-Dose Radioiodine Therapy in Early Thyroid Cancer |
| NCT00358956 | PHASE2 | COMPLETED | A Study To Assess ZD6474 (ZACTIMA™) Monotherapy In Locally Advanced or Metastatic Hereditary Medullary Thyroid Cancer |
| NCT00519896 | PHASE2 | COMPLETED | Sunitinib Malate in Treating Patients With Iodine-Refractory Recurrent or Metastatic Thyroid Cancer |
| NCT00784303 | PHASE2 | COMPLETED | Evaluating the Safety and Efficacy of Oral Lenvatinib in Medullary and Iodine-131 Refractory, Unresectable Differentiated Thyroid Cancers, Stratified by Histology |
Related Atlas pages
- Associated diseases: thyroid gland carcinoma
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): thyroid cancer