TMCC2-AS1

Summary

TMCC2-AS1 (TMCC2 antisense RNA 1, HGNC:41042) is a long non-coding RNA gene on chromosome 1q32.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41042
Approved symbol	TMCC2-AS1
Name	TMCC2 antisense RNA 1
Location	1q32.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000225063
Ensembl biotype	lncRNA
Entrez	101929459
RNAcentral	URS00026A2013 — lncRNA, 929 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000452599

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000452599 — 2 exons

Exon	Start	End
ENSE00001696847	205236505	205236867
ENSE00001717519	205233821	205234143

Expression profiles

Bgee: expression breadth broad, 70 present calls, max score 67.97.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0110 / max 7.6235, expressed in 3 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
16963	0.0110	3

Top tissues by expression

177 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
left testis	UBERON:0004533	67.97	gold quality
testis	UBERON:0000473	65.30	gold quality
right testis	UBERON:0004534	64.44	gold quality
buccal mucosa cell	CL:0002336	62.27	gold quality
lower lobe of lung	UBERON:0008949	61.09	silver quality
sural nerve	UBERON:0015488	60.22	silver quality
corpus callosum	UBERON:0002336	59.95	gold quality
hindlimb stylopod muscle	UBERON:0004252	59.20	gold quality
sperm	CL:0000019	52.16	gold quality
monocyte	CL:0000576	51.96	silver quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	51.18	silver quality
prefrontal cortex	UBERON:0000451	49.97	gold quality
muscle of leg	UBERON:0001383	48.00	gold quality
islet of Langerhans	UBERON:0000006	47.75	gold quality
medial globus pallidus	UBERON:0002477	47.58	gold quality
tibial nerve	UBERON:0001323	47.47	gold quality
gall bladder	UBERON:0002110	47.17	gold quality
cerebellar cortex	UBERON:0002129	47.10	silver quality
gastrocnemius	UBERON:0001388	46.97	silver quality
cerebellar hemisphere	UBERON:0002245	46.90	silver quality
Brodmann (1909) area 9	UBERON:0013540	46.88	gold quality
cerebellum	UBERON:0002037	46.51	silver quality
lymph node	UBERON:0000029	46.13	silver quality
C1 segment of cervical spinal cord	UBERON:0006469	46.03	gold quality
globus pallidus	UBERON:0001875	45.87	gold quality
spinal cord	UBERON:0002240	45.40	gold quality
right frontal lobe	UBERON:0002810	44.74	gold quality
amniotic fluid	UBERON:0000173	44.60	gold quality
anatomical system	UBERON:0000467	44.12	gold quality
material anatomical entity	UBERON:0000465	43.89	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.31

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.