TMEM161A
gene geneOn this page
Also known as FLJ39645FLJ20422
Summary
TMEM161A (transmembrane protein 161A, HGNC:26020) is a protein-coding gene on chromosome 19p13.11, encoding Transmembrane protein 161A (Q9NX61). May play a role in protection against oxidative stress.
Involved in several processes, including cellular response to UV; regulation of cellular response to stress; and response to retinoic acid. Predicted to be located in membrane.
Source: NCBI Gene 54929 — RefSeq curated summary.
At a glance
- Clinical variants (ClinVar): 99 total
- Druggable target: yes
- MANE Select transcript:
NM_017814
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:26020 |
| Approved symbol | TMEM161A |
| Name | transmembrane protein 161A |
| Location | 19p13.11 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | FLJ39645, FLJ20422 |
| Ensembl gene | ENSG00000064545 |
| Ensembl biotype | protein_coding |
| OMIM | 618966 |
| Entrez | 54929 |
Gene structure
Transcript identifiers
Ensembl transcripts: 27 — 19 protein_coding, 5 retained_intron, 2 nonsense_mediated_decay, 1 protein_coding_CDS_not_defined
ENST00000162044, ENST00000450333, ENST00000586357, ENST00000587096, ENST00000587406, ENST00000587583, ENST00000587915, ENST00000587925, ENST00000587985, ENST00000589448, ENST00000590216, ENST00000591031, ENST00000591443, ENST00000592147, ENST00000592369, ENST00000877799, ENST00000877800, ENST00000877801, ENST00000877802, ENST00000877803, ENST00000877804, ENST00000877805, ENST00000913781, ENST00000913782, ENST00000913783, ENST00000913784, ENST00000913785
RefSeq mRNA: 3 — MANE Select: NM_017814
NM_001256766, NM_001411131, NM_017814
CCDS: CCDS12393, CCDS58656, CCDS92570
Canonical transcript exons
ENST00000162044 — 12 exons
| Exon | Start | End |
|---|---|---|
| ENSE00002268059 | 19119169 | 19120183 |
| ENSE00003462582 | 19121525 | 19121668 |
| ENSE00003509977 | 19134784 | 19134887 |
| ENSE00003560868 | 19121308 | 19121421 |
| ENSE00003660377 | 19120765 | 19120861 |
| ENSE00003663140 | 19138426 | 19138478 |
| ENSE00003695939 | 19121759 | 19121819 |
| ENSE00003696172 | 19130156 | 19130307 |
| ENSE00003696662 | 19132657 | 19132754 |
| ENSE00003701044 | 19133130 | 19133210 |
| ENSE00003701576 | 19132352 | 19132508 |
| ENSE00003786553 | 19120992 | 19121166 |
Expression profiles
Bgee: expression breadth ubiquitous, 272 present calls, max score 96.22.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 17.8843 / max 173.8431, expressed in 1792 samples.
FANTOM5 promoters (1 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 180123 | 17.8843 | 1792 |
Top tissues by expression
285 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| pancreatic ductal cell | CL:0002079 | 96.22 | gold quality |
| gastrocnemius | UBERON:0001388 | 92.82 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 92.15 | gold quality |
| muscle of leg | UBERON:0001383 | 91.75 | gold quality |
| tibialis anterior | UBERON:0001385 | 91.02 | silver quality |
| right lobe of liver | UBERON:0001114 | 90.99 | gold quality |
| left adrenal gland | UBERON:0001234 | 90.70 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 90.70 | gold quality |
| right adrenal gland | UBERON:0001233 | 90.67 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 90.57 | gold quality |
| muscle organ | UBERON:0001630 | 90.39 | gold quality |
| skeletal muscle organ | UBERON:0014892 | 90.39 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 90.29 | gold quality |
| apex of heart | UBERON:0002098 | 90.29 | gold quality |
| body of uterus | UBERON:0009853 | 89.98 | gold quality |
| stromal cell of endometrium | CL:0002255 | 89.84 | gold quality |
| adrenal cortex | UBERON:0001235 | 89.84 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 89.54 | gold quality |
| thyroid gland | UBERON:0002046 | 89.23 | gold quality |
| right ovary | UBERON:0002118 | 89.03 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 88.93 | gold quality |
| left uterine tube | UBERON:0001303 | 88.86 | gold quality |
| endocervix | UBERON:0000458 | 88.77 | gold quality |
| adrenal gland | UBERON:0002369 | 88.57 | gold quality |
| ectocervix | UBERON:0012249 | 88.54 | gold quality |
| left ovary | UBERON:0002119 | 88.42 | gold quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 88.08 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 87.91 | gold quality |
| body of stomach | UBERON:0001161 | 87.79 | gold quality |
| right atrium auricular region | UBERON:0006631 | 87.54 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 4.30 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
9 targeting TMEM161A, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-6715B-5P | 99.64 | 69.63 | 1420 |
| HSA-MIR-1827 | 99.63 | 68.57 | 3265 |
| HSA-MIR-4649-3P | 99.56 | 66.90 | 1783 |
| HSA-MIR-4269 | 99.55 | 69.89 | 1373 |
| HSA-MIR-6840-3P | 98.68 | 65.95 | 1923 |
| HSA-MIR-4448 | 97.04 | 66.22 | 752 |
| HSA-MIR-6772-3P | 97.04 | 65.89 | 784 |
| HSA-MIR-5091 | 92.36 | 64.51 | 99 |
| HSA-MIR-4304 | 90.01 | 61.07 | 99 |
Literature-anchored findings (GeneRIF, showing 1)
- adaptive response to oxidative stress (AROS)-29 gene has a functional role in the protection against oxidative stress. (PMID:16551573)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | tmem161a | ENSDARG00000012790 |
| mus_musculus | Tmem161a | ENSMUSG00000002342 |
| rattus_norvegicus | Tmem161a | ENSRNOG00000020390 |
| drosophila_melanogaster | emei | FBGN0036133 |
| caenorhabditis_elegans | Y87G2A.13 | WBGENE00013601 |
Paralogs (1): TMEM161B (ENSG00000164180)
Protein
Protein identifiers
Transmembrane protein 161A — Q9NX61 (reviewed: Q9NX61)
Alternative names: Adaptive response to oxidative stress protein 29
All UniProt accessions (8): Q9NX61, K7EJK6, K7EKY7, K7EPA3, K7EQ34, K7EQE7, U3KQT6, V9GYP8
UniProt curated annotations — full annotation on UniProt →
Function. May play a role in protection against oxidative stress. Overexpression leads to reduced levels of oxidant-induced DNA damage and apoptosis.
Subcellular location. Membrane.
Induction. Up-regulated in cells which display transient adaptation to mild oxidative stress by treatment with diethylmaleate, a glutathione-depleting agent. Also induced by retinoic acid.
Similarity. Belongs to the TMEM161 family.
Isoforms (2)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q9NX61-1 | 1 | yes |
| Q9NX61-2 | 2 |
RefSeq proteins (3): NP_001243695, NP_001398060, NP_060284* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR019395 | Transmembrane_161A/B | Family |
Pfam: PF10268
UniProt features (24 total): topological domain 9, transmembrane region 8, signal peptide 1, chain 1, modified residue 1, glycosylation site 1, splice variant 1, sequence variant 1, sequence conflict 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q9NX61-F1 | 85.72 | 0.55 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (1): 69
Glycosylation sites (1): 34
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 109 (showing top):
GOBP_CELLULAR_RESPONSE_TO_UV, MODULE_255, GOBP_CELLULAR_RESPONSE_TO_LIGHT_STIMULUS, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN, GRAESSMANN_RESPONSE_TO_MC_AND_DOXORUBICIN_DN, MODULE_317, GOBP_NEGATIVE_REGULATION_OF_INTRINSIC_APOPTOTIC_SIGNALING_PATHWAY_IN_RESPONSE_TO_DNA_DAMAGE, GOBP_REGULATION_OF_DNA_REPAIR, GOBP_NEGATIVE_REGULATION_OF_INTRACELLULAR_SIGNAL_TRANSDUCTION, GOBP_NEGATIVE_REGULATION_OF_INTRINSIC_APOPTOTIC_SIGNALING_PATHWAY, GOBP_APOPTOTIC_SIGNALING_PATHWAY, GOBP_REGULATION_OF_RESPONSE_TO_STRESS, GOBP_INTRINSIC_APOPTOTIC_SIGNALING_PATHWAY_IN_RESPONSE_TO_DNA_DAMAGE, GOBP_RESPONSE_TO_OXYGEN_CONTAINING_COMPOUND, GOBP_RESPONSE_TO_UV
GO Biological Process (5): response to retinoic acid (GO:0032526), cellular response to oxidative stress (GO:0034599), cellular response to UV (GO:0034644), positive regulation of DNA repair (GO:0045739), negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage (GO:1902230)
GO Molecular Function (1): protein binding (GO:0005515)
GO Cellular Component (1): membrane (GO:0016020)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| response to lipid | 1 |
| response to oxygen-containing compound | 1 |
| response to oxidative stress | 1 |
| cellular response to chemical stress | 1 |
| response to UV | 1 |
| cellular response to light stimulus | 1 |
| DNA repair | 1 |
| regulation of DNA repair | 1 |
| positive regulation of response to stimulus | 1 |
| positive regulation of DNA metabolic process | 1 |
| intrinsic apoptotic signaling pathway in response to DNA damage | 1 |
| regulation of intrinsic apoptotic signaling pathway in response to DNA damage | 1 |
| negative regulation of intrinsic apoptotic signaling pathway | 1 |
| binding | 1 |
| cellular anatomical structure | 1 |
Protein interactions and networks
STRING
584 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| TMEM161A | TMEM94 | Q12767 | 612 |
| TMEM161A | SLC25A42 | Q86VD7 | 591 |
| TMEM161A | POPDC2 | Q9HBU9 | 520 |
| TMEM161A | TMEM38A | Q9H6F2 | 506 |
| TMEM161A | CFAP68 | Q9H5F2 | 502 |
| TMEM161A | KLHL31 | Q9H511 | 491 |
| TMEM161A | CASKIN2 | Q8WXE0 | 483 |
| TMEM161A | ASB14 | A6NK59 | 478 |
| TMEM161A | TMEM174 | Q8WUU8 | 471 |
| TMEM161A | RSAD1 | Q9HA92 | 449 |
| TMEM161A | ARMC6 | Q6NXE6 | 432 |
| TMEM161A | APPL2 | Q8NEU8 | 419 |
| TMEM161A | TMEM214 | Q6NUQ4 | 418 |
| TMEM161A | NFATC4 | Q14934 | 417 |
| TMEM161A | MANEAL | Q5VSG8 | 414 |
| TMEM161A | TMX4 | Q9H1E5 | 414 |
IntAct
99 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| TMED9 | TMED10 | psi-mi:“MI:0914”(association) | 0.730 |
| CFTR | ESYT2 | psi-mi:“MI:0914”(association) | 0.710 |
| RAF1 | CALU | psi-mi:“MI:0914”(association) | 0.640 |
| TMEM161A | GPR35 | psi-mi:“MI:0915”(physical association) | 0.550 |
| SLC30A2 | ESYT2 | psi-mi:“MI:0914”(association) | 0.530 |
| SLC6A8 | ILVBL | psi-mi:“MI:0914”(association) | 0.530 |
| UNC93B1 | GPR89A | psi-mi:“MI:0914”(association) | 0.530 |
| STOM | EI24 | psi-mi:“MI:0914”(association) | 0.510 |
| GPR37 | TMEM161A | psi-mi:“MI:0915”(physical association) | 0.510 |
| TMEM161A | GPR37 | psi-mi:“MI:0915”(physical association) | 0.510 |
| NRAS | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.480 |
| TMEM161A | AGTR1 | psi-mi:“MI:0915”(physical association) | 0.370 |
| TMEM161A | CCR2 | psi-mi:“MI:0915”(physical association) | 0.370 |
| TMEM161A | F2RL1 | psi-mi:“MI:0915”(physical association) | 0.370 |
| TMEM161A | GNRHR | psi-mi:“MI:0915”(physical association) | 0.370 |
| TMEM161A | CHRM5 | psi-mi:“MI:0915”(physical association) | 0.370 |
| TMEM161A | OXTR | psi-mi:“MI:0915”(physical association) | 0.370 |
| TMEM161A | PTGER4 | psi-mi:“MI:0915”(physical association) | 0.370 |
| Cdc16 | ANAPC15 | psi-mi:“MI:0914”(association) | 0.350 |
| Atp2a2 | ESYT2 | psi-mi:“MI:0914”(association) | 0.350 |
| Smn1 | CLNS1A | psi-mi:“MI:0914”(association) | 0.350 |
| ARMC6 | psi-mi:“MI:0914”(association) | 0.350 | |
| ATL3 | SNX14 | psi-mi:“MI:0914”(association) | 0.350 |
| MYO5C | CLIC1 | psi-mi:“MI:0914”(association) | 0.350 |
| Ktn1 | ESYT2 | psi-mi:“MI:0914”(association) | 0.350 |
| MYC | TARS3 | psi-mi:“MI:0914”(association) | 0.350 |
| LGALS3BP | CEP290 | psi-mi:“MI:0914”(association) | 0.350 |
| HDAC6 | GLOD5 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (116): TMEM161A (Proximity Label-MS), TMEM161A (Affinity Capture-MS), TMEM161A (Affinity Capture-MS), TMEM161A (Affinity Capture-MS), TMEM161A (Affinity Capture-MS), TMEM161A (Affinity Capture-MS), TMEM161A (Affinity Capture-MS), TMEM161A (Affinity Capture-MS), TMEM161A (Affinity Capture-MS), TMEM161A (Affinity Capture-MS), TMEM161A (Affinity Capture-MS), TMEM161A (Affinity Capture-MS), TMEM161A (Affinity Capture-MS), STOM (Affinity Capture-MS), TMEM161A (Affinity Capture-RNA)
ESM2 similar proteins: A0A140LIJ0, A1L3G9, A4IFL1, B9X187, O18968, O70491, P08033, P08034, P28230, P35212, P36380, P51915, P60572, Q02738, Q059Y8, Q0V8E7, Q1LXZ7, Q28FG4, Q29559, Q4QR83, Q5E9Z5, Q5FVF4, Q5FWS4, Q5JW98, Q5R7B4, Q5T197, Q5T1A1, Q60HF7, Q640M6, Q6GMB1, Q6WGK6, Q7SY10, Q7TNJ0, Q8BXV2, Q8C2L6, Q8C9E8, Q8CE93, Q8CEG0, Q8N5C1, Q8NDZ6
Diamond homologs: Q0V947, Q28FG4, Q6GMB1, Q7SY10, Q8C2L6, Q8NDZ6, Q8VCA6, Q9NX61
SIGNOR signaling
0 interactions.
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 128 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| CD209 (DC-SIGN) signaling | 5 | 31.3× | 3e-05 |
| Signaling by phosphorylated juxtamembrane, extracellular and kinase domain KIT mutants | 5 | 31.3× | 3e-05 |
| DAP12 signaling | 5 | 22.2× | 1e-04 |
| Signaling by high-kinase activity BRAF mutants | 5 | 19.1× | 2e-04 |
| MAP2K and MAPK activation | 5 | 17.2× | 3e-04 |
| Signaling by RAF1 mutants | 5 | 16.8× | 3e-04 |
| R-HSA-425366 | 7 | 15.3× | 3e-05 |
| Signaling by moderate kinase activity BRAF mutants | 5 | 15.3× | 4e-04 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| intracellular zinc ion homeostasis | 5 | 21.9× | 9e-04 |
| adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway | 6 | 11.9× | 2e-03 |
| positive regulation of cytosolic calcium ion concentration | 9 | 9.6× | 4e-04 |
| G protein-coupled receptor signaling pathway | 14 | 4.6× | 9e-04 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
99 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 77 |
| Likely benign | 2 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
2308 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 19:19120759:TCTCA:T | donor_loss | 1.0000 |
| 19:19120760:CTCAC:C | donor_loss | 1.0000 |
| 19:19120761:TCACC:T | donor_loss | 1.0000 |
| 19:19120762:CACCC:C | donor_loss | 1.0000 |
| 19:19120763:A:AC | donor_gain | 1.0000 |
| 19:19120763:AC:A | donor_gain | 1.0000 |
| 19:19120763:ACCCA:A | donor_loss | 1.0000 |
| 19:19120764:C:CC | donor_gain | 1.0000 |
| 19:19120764:C:CG | donor_loss | 1.0000 |
| 19:19120764:CC:C | donor_gain | 1.0000 |
| 19:19120764:CCCAG:C | donor_gain | 1.0000 |
| 19:19120768:G:C | donor_gain | 1.0000 |
| 19:19120858:CCAC:C | acceptor_gain | 1.0000 |
| 19:19120859:CAC:C | acceptor_gain | 1.0000 |
| 19:19120859:CACC:C | acceptor_gain | 1.0000 |
| 19:19120861:CCTG:C | acceptor_loss | 1.0000 |
| 19:19120862:C:T | acceptor_loss | 1.0000 |
| 19:19120989:TACC:T | donor_loss | 1.0000 |
| 19:19120990:A:AC | donor_gain | 1.0000 |
| 19:19120990:AC:A | donor_gain | 1.0000 |
| 19:19120991:C:CC | donor_gain | 1.0000 |
| 19:19120991:C:G | donor_loss | 1.0000 |
| 19:19120991:CC:C | donor_gain | 1.0000 |
| 19:19120991:CCCT:C | donor_gain | 1.0000 |
| 19:19121163:CAGC:C | acceptor_gain | 1.0000 |
| 19:19121164:AGC:A | acceptor_gain | 1.0000 |
| 19:19121164:AGCCT:A | acceptor_loss | 1.0000 |
| 19:19121165:GC:G | acceptor_gain | 1.0000 |
| 19:19121165:GCCTG:G | acceptor_loss | 1.0000 |
| 19:19121166:CC:C | acceptor_gain | 1.0000 |
AlphaMissense
3020 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 19:19120826:G:C | S375R | 0.996 |
| 19:19120826:G:T | S375R | 0.996 |
| 19:19120828:T:G | S375R | 0.996 |
| 19:19121403:G:C | S273R | 0.989 |
| 19:19121403:G:T | S273R | 0.989 |
| 19:19121405:T:G | S273R | 0.989 |
| 19:19132380:A:G | W139R | 0.987 |
| 19:19132380:A:T | W139R | 0.987 |
| 19:19121372:A:G | W284R | 0.986 |
| 19:19121372:A:T | W284R | 0.986 |
| 19:19121559:C:G | A256P | 0.985 |
| 19:19121593:G:C | F244L | 0.985 |
| 19:19121593:G:T | F244L | 0.985 |
| 19:19121595:A:G | F244L | 0.985 |
| 19:19120172:A:G | W400R | 0.984 |
| 19:19120172:A:T | W400R | 0.984 |
| 19:19120001:A:G | W457R | 0.983 |
| 19:19120001:A:T | W457R | 0.983 |
| 19:19134847:G:T | A15D | 0.983 |
| 19:19120004:A:G | W456R | 0.982 |
| 19:19120004:A:T | W456R | 0.982 |
| 19:19132473:C:G | D108H | 0.982 |
| 19:19120772:C:A | K393N | 0.981 |
| 19:19120772:C:G | K393N | 0.981 |
| 19:19120809:G:C | P381R | 0.981 |
| 19:19121610:C:G | G239R | 0.981 |
| 19:19134808:G:T | A28E | 0.980 |
| 19:19121609:C:T | G239D | 0.979 |
| 19:19132468:A:C | F109L | 0.979 |
| 19:19132468:A:T | F109L | 0.979 |
dbSNP variants (sampled 300 via entrez): RS1000273895 (19:19137825 TAA>T), RS1000352558 (19:19133062 C>A), RS1000385418 (19:19131578 T>C), RS1000390681 (19:19122384 T>G), RS1000394652 (19:19139680 C>T), RS1000466897 (19:19139460 T>C), RS1000565023 (19:19125717 G>A), RS1000991243 (19:19121172 C>T), RS1001499764 (19:19138374 C>A,T), RS1001678450 (19:19138802 C>T), RS1001738643 (19:19126244 T>C), RS1001782222 (19:19137959 G>C), RS1001907072 (19:19119429 G>A,C), RS1002087340 (19:19126629 G>A), RS1002210999 (19:19120498 C>G,T)
Disease associations
OMIM: gene MIM:618966 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
0 associations (top):
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL6066277 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
ChEMBL bioactivities
4 potent at pChembl≥5 of 4 total, top 4 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 7.36 | Kd | 44.02 | nM | CHEMBL3752910 |
| 7.36 | ED50 | 44.02 | nM | CHEMBL3752910 |
| 6.36 | Kd | 434.3 | nM | CHEMBL5653589 |
| 6.36 | ED50 | 434.3 | nM | CHEMBL5653589 |
PubChem BioAssay actives
2 with measured affinity, of 4 total; 2 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 4-methyl-3-[(1-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2149609: Binding affinity to human TMEM161A incubated for 45 mins by Kinobead based pull down assay | kd | 0.0440 | uM |
| 4-methyl-3-[(2-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2149609: Binding affinity to human TMEM161A incubated for 45 mins by Kinobead based pull down assay | kd | 0.4343 | uM |
CTD chemical–gene interactions
30 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Arsenic | affects cotreatment, increases abundance, increases expression, affects methylation | 2 |
| alpha-pinene | affects cotreatment, increases oxidation, increases abundance | 1 |
| pirinixic acid | affects binding, increases activity, increases expression | 1 |
| arsenite | affects binding, increases reaction | 1 |
| sodium arsenite | affects cotreatment, increases abundance, increases expression | 1 |
| manganese chloride | affects cotreatment, increases abundance, increases expression | 1 |
| benzo(e)pyrene | increases methylation | 1 |
| methacrylaldehyde | increases abundance, affects cotreatment, increases oxidation | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| 2-palmitoylglycerol | increases expression | 1 |
| 2-methyl-2H-pyrazole-3-carboxylic acid (2-methyl-4-o-tolylazophenyl)amide | decreases expression, decreases reaction | 1 |
| jinfukang | affects cotreatment, increases expression | 1 |
| MT19c compound | decreases expression | 1 |
| Acrolein | affects cotreatment, increases oxidation, increases abundance | 1 |
| Air Pollutants | increases oxidation, affects cotreatment, increases abundance | 1 |
| Vehicle Emissions | decreases expression, decreases reaction | 1 |
| Benzo(a)pyrene | affects methylation | 1 |
| Cisplatin | affects cotreatment, increases expression | 1 |
| Manganese | affects cotreatment, increases abundance, increases expression | 1 |
| Methapyrilene | increases methylation | 1 |
| Ozone | affects cotreatment, increases oxidation, increases abundance | 1 |
| Smoke | decreases expression | 1 |
| Tetrachlorodibenzodioxin | affects expression | 1 |
| Thiram | decreases expression | 1 |
| Valproic Acid | affects expression | 1 |
| 1-Methyl-4-phenylpyridinium | increases expression | 1 |
| Aflatoxin B1 | increases methylation | 1 |
| Okadaic Acid | decreases expression | 1 |
| Particulate Matter | decreases expression, decreases reaction | 1 |
| Volatile Organic Compounds | affects cotreatment, increases oxidation | 1 |
ChEMBL screening assays
1 unique, capped per target: 1 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL5652651 | Binding | Binding affinity to human TMEM161A incubated for 45 mins by Kinobead based pull down assay | NVP-BHG712: Effects of Regioisomers on the Affinity and Selectivity toward the EPHrin Family. — ChemMedChem |
Cellosaurus cell lines
2 cell lines: 2 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_D8CL | Ubigene A-549 TMEM161A KO | Cancer cell line | Male |
| CVCL_E0R7 | Ubigene HeLa TMEM161A KO | Cancer cell line | Female |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.