TMEM212-IT1

Summary

TMEM212-IT1 (TMEM212 intronic transcript 1, HGNC:41505) is a long non-coding RNA gene on chromosome 3q26.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41505
Approved symbol	TMEM212-IT1
Name	TMEM212 intronic transcript 1
Location	3q26.31
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000235943
Ensembl biotype	lncRNA
Entrez	100874359
RNAcentral	URS000054E279 — lncRNA, 470 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000456146

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000456146 — 2 exons

Exon	Start	End
ENSE00001676562	171894436	171894523
ENSE00001720072	171894859	171895240

Expression profiles

Bgee: expression breadth broad, 27 present calls, max score 92.49.

Top tissues by expression

27 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	92.49	gold quality
pancreas	UBERON:0001264	85.87	silver quality
monocyte	CL:0000576	59.67	gold quality
right lobe of liver	UBERON:0001114	54.40	gold quality
superior frontal gyrus	UBERON:0002661	54.20	gold quality
liver	UBERON:0002107	51.67	gold quality
prefrontal cortex	UBERON:0000451	50.90	gold quality
gastrocnemius	UBERON:0001388	47.12	gold quality
muscle layer of sigmoid colon	UBERON:0035805	47.11	gold quality
right uterine tube	UBERON:0001302	45.30	silver quality
blood	UBERON:0000178	45.27	silver quality
esophagus mucosa	UBERON:0002469	44.33	gold quality
heart left ventricle	UBERON:0002084	43.43	silver quality
dorsolateral prefrontal cortex	UBERON:0009834	43.19	silver quality
skin of leg	UBERON:0001511	42.59	silver quality
right frontal lobe	UBERON:0002810	42.52	silver quality
Brodmann (1909) area 9	UBERON:0013540	41.83	silver quality
skin of abdomen	UBERON:0001416	41.66	silver quality
vagina	UBERON:0000996	41.31	silver quality
anterior cingulate cortex	UBERON:0009835	41.21	silver quality
amygdala	UBERON:0001876	39.14	silver quality
testis	UBERON:0000473	37.77	gold quality
left testis	UBERON:0004533	37.42	gold quality
putamen	UBERON:0001874	37.39	silver quality
right testis	UBERON:0004534	37.03	gold quality
upper lobe of left lung	UBERON:0008952	35.39	silver quality
pituitary gland	UBERON:0000007	34.70	silver quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.15

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.