TMEM41A-DT

Summary

TMEM41A-DT (TMEM41A divergent transcript, HGNC:58335) is a long non-coding RNA gene on chromosome 3q27.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58335
Approved symbol	TMEM41A-DT
Name	TMEM41A divergent transcript
Location	3q27.2
Locus type	RNA, long non-coding
Status	Approved
Aliases	lnc-MAP3K13-3:1
Ensembl gene	ENSG00000286086
Ensembl biotype	lncRNA
Entrez	105374254

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000651456, ENST00000838616, ENST00000838617

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000651456 — 2 exons

Exon	Start	End
ENSE00003842523	185499944	185501109
ENSE00003848817	185499140	185499538

Expression profiles

Bgee: expression breadth ubiquitous, 123 present calls, max score 67.28.

Top tissues by expression

123 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
duodenum	UBERON:0002114	67.28	gold quality
right adrenal gland cortex	UBERON:0035827	65.26	gold quality
right adrenal gland	UBERON:0001233	64.14	gold quality
left adrenal gland cortex	UBERON:0035825	63.53	gold quality
adrenal gland	UBERON:0002369	62.69	gold quality
left adrenal gland	UBERON:0001234	62.58	gold quality
small intestine	UBERON:0002108	62.16	gold quality
small intestine Peyer’s patch	UBERON:0003454	61.27	gold quality
left ovary	UBERON:0002119	60.62	gold quality
islet of Langerhans	UBERON:0000006	60.48	gold quality
right uterine tube	UBERON:0001302	59.97	gold quality
ovary	UBERON:0000992	59.92	gold quality
adrenal tissue	UBERON:0018303	59.64	gold quality
adult mammalian kidney	UBERON:0000082	59.62	gold quality
prostate gland	UBERON:0002367	58.58	gold quality
mucosa of transverse colon	UBERON:0004991	58.47	gold quality
ventricular zone	UBERON:0003053	58.40	silver quality
kidney	UBERON:0002113	58.37	gold quality
ganglionic eminence	UBERON:0004023	58.29	silver quality
metanephros cortex	UBERON:0010533	57.73	gold quality
body of stomach	UBERON:0001161	57.26	gold quality
stomach	UBERON:0000945	56.28	gold quality
fundus of stomach	UBERON:0001160	56.21	gold quality
skeletal muscle tissue	UBERON:0001134	56.00	gold quality
right ovary	UBERON:0002118	55.91	gold quality
cortex of kidney	UBERON:0001225	55.81	gold quality
rectum	UBERON:0001052	55.67	gold quality
saliva-secreting gland	UBERON:0001044	55.58	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	55.33	gold quality
minor salivary gland	UBERON:0001830	55.27	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.58

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.