TMSB10
gene geneOn this page
Also known as TB10
Summary
TMSB10 (thymosin beta 10, HGNC:11879) is a protein-coding gene on chromosome 2p11.2, encoding Thymosin beta-10 (P63313). Plays an important role in the organization of the cytoskeleton. It is a selective cancer dependency (DepMap: 30.5% of cell lines).
Predicted to enable actin monomer binding activity. Predicted to be involved in regulation of cell migration. Predicted to be located in cytoskeleton. Predicted to be active in cytoplasm.
Source: NCBI Gene 9168 — RefSeq curated summary.
At a glance
- Druggable target: yes
- Cancer dependency (DepMap): dependent in 30.5% of screened cell lines
- MANE Select transcript:
NM_021103
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:11879 |
| Approved symbol | TMSB10 |
| Name | thymosin beta 10 |
| Location | 2p11.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | TB10 |
| Ensembl gene | ENSG00000034510 |
| Ensembl biotype | protein_coding |
| OMIM | 188399 |
| Entrez | 9168 |
Gene structure
Transcript identifiers
Ensembl transcripts: 9 — 9 protein_coding
ENST00000233143, ENST00000877287, ENST00000877288, ENST00000877289, ENST00000929522, ENST00000929523, ENST00000929524, ENST00000929525, ENST00000929526
RefSeq mRNA: 1 — MANE Select: NM_021103
NM_021103
CCDS: CCDS1970
Canonical transcript exons
ENST00000233143 — 3 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000767123 | 84906003 | 84906117 |
| ENSE00000799789 | 84906389 | 84906671 |
| ENSE00001004473 | 84905656 | 84905718 |
Expression profiles
Bgee: expression breadth ubiquitous, 301 present calls, max score 99.98.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 2400.9340 / max 59942.2474, expressed in 1828 samples.
FANTOM5 promoters (4 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 21185 | 2389.6393 | 1828 |
| 21187 | 9.2241 | 1593 |
| 21186 | 1.8826 | 964 |
| 21188 | 0.1881 | 61 |
Top tissues by expression
301 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| cortical plate | UBERON:0005343 | 99.98 | gold quality |
| monocyte | CL:0000576 | 99.96 | gold quality |
| leukocyte | CL:0000738 | 99.96 | gold quality |
| mononuclear cell | CL:0000842 | 99.96 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 99.96 | gold quality |
| granulocyte | CL:0000094 | 99.95 | gold quality |
| ganglionic eminence | UBERON:0004023 | 99.95 | gold quality |
| stromal cell of endometrium | CL:0002255 | 99.94 | gold quality |
| right lung | UBERON:0002167 | 99.94 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 99.93 | gold quality |
| colonic mucosa | UBERON:0000317 | 99.92 | gold quality |
| rectum | UBERON:0001052 | 99.92 | gold quality |
| tibial nerve | UBERON:0001323 | 99.92 | gold quality |
| gall bladder | UBERON:0002110 | 99.92 | gold quality |
| calcaneal tendon | UBERON:0003701 | 99.92 | gold quality |
| corpus epididymis | UBERON:0004359 | 99.92 | gold quality |
| mucosa of sigmoid colon | UBERON:0004993 | 99.92 | gold quality |
| periodontal ligament | UBERON:0008266 | 99.92 | gold quality |
| upper lobe of lung | UBERON:0008948 | 99.92 | gold quality |
| ileal mucosa | UBERON:0000331 | 99.91 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 99.90 | gold quality |
| vermiform appendix | UBERON:0001154 | 99.90 | gold quality |
| decidua | UBERON:0002450 | 99.90 | gold quality |
| caecum | UBERON:0001153 | 99.89 | gold quality |
| peritoneum | UBERON:0002358 | 99.89 | gold quality |
| right testis | UBERON:0004534 | 99.89 | gold quality |
| adipose tissue of abdominal region | UBERON:0007808 | 99.89 | gold quality |
| omental fat pad | UBERON:0010414 | 99.89 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 99.89 | gold quality |
| lymph node | UBERON:0000029 | 99.88 | gold quality |
Single-cell (SCXA)
Detected in 82 experiment(s), a significant marker in 33.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-8410 | yes | 18583.11 |
| E-CURD-46 | yes | 15566.96 |
| E-MTAB-10042 | yes | 11735.01 |
| E-MTAB-10287 | yes | 11202.50 |
| E-CURD-122 | yes | 11033.62 |
| E-MTAB-8142 | yes | 10398.68 |
| E-MTAB-11121 | yes | 10371.30 |
| E-MTAB-7316 | yes | 10166.83 |
| E-GEOD-134144 | yes | 9603.23 |
| E-GEOD-130148 | yes | 9012.85 |
| E-GEOD-124263 | yes | 8110.45 |
| E-CURD-98 | yes | 7764.70 |
| E-ANND-2 | yes | 7760.82 |
| E-HCAD-9 | yes | 7724.56 |
| E-HCAD-31 | yes | 4395.22 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): RARA
miRNA regulators (miRDB)
19 targeting TMSB10, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-12121 | 99.99 | 66.64 | 255 |
| HSA-MIR-34A-5P | 99.99 | 71.21 | 1784 |
| HSA-MIR-449A | 99.99 | 71.05 | 1776 |
| HSA-MIR-539-3P | 99.98 | 70.74 | 1616 |
| HSA-MIR-485-3P | 99.98 | 70.68 | 1585 |
| HSA-MIR-4775 | 99.98 | 75.00 | 6394 |
| HSA-MIR-27A-3P | 99.98 | 72.13 | 2955 |
| HSA-MIR-27B-3P | 99.98 | 72.13 | 2955 |
| HSA-MIR-9985 | 99.98 | 72.11 | 2939 |
| HSA-MIR-34C-5P | 99.97 | 70.45 | 1577 |
| HSA-MIR-449B-5P | 99.97 | 70.26 | 1580 |
| HSA-MIR-96-5P | 99.95 | 72.80 | 2140 |
| HSA-MIR-182-5P | 99.87 | 74.03 | 2589 |
| HSA-MIR-548AU-3P | 99.70 | 68.22 | 1373 |
| HSA-MIR-12123 | 99.52 | 71.79 | 2990 |
| HSA-MIR-3944-5P | 98.50 | 67.55 | 997 |
| HSA-MIR-5090 | 93.28 | 60.86 | 94 |
| HSA-MIR-6775-5P | 92.43 | 61.00 | 132 |
| HSA-MIR-6774-3P | 89.14 | 65.20 | 68 |
Functional genomics
DepMap (CRISPR cell-line fitness): dependent in 30.5% of screened cell lines.
Literature-anchored findings (GeneRIF, showing 27)
- TB10 plays a critical role in the regulation of anchorage-independent growth and assembly of actin filaments. (PMID:12481941)
- Introduction of E-Tmod cDNA into a tumor cell line reverses TB10 mediated apoptosis and restored actin architectures. (PMID:14741341)
- TB10 has a role in progression of human thyroid carcinomas, particularly in the anaplastic histotypes (PMID:15254683)
- Inhibition of Ras signal transduction by thymosin beta(10) results in antiangiogenic and antitumor effects, suggesting that thymosin beta(10) may be valuable in anticancer therapy. (PMID:15665289)
- results strongly suggest that Thr20 is specifically required for actin sequestration by TB10 in ovarian cancer cells (PMID:16012174)
- the distribution of staining for thymosin beta10 was inverse of staining for F-actin. These data support a physiological role for thymosin beta10 in sequestration of G-actin as well as in cancer cell motility. (PMID:16786322)
- Expression of TB10 and its role in non-small cell lung cancer are reported. (PMID:18789485)
- Thymosin beta-10 is aberrantly expressed in pancreatic cancer and induces JNK activation. (PMID:19194824)
- outlines for the first time that salivary glands during foetal life express and secrete peptides such as beta-thymosins probably involved in the development of the oral cavity and its annexes (PMID:19337364)
- The expression of Tbeta10 in the human kidney during the initial phases of its physiological development, mainly restricted in the proximal and the distal tubuli. (PMID:20836742)
- Describe beta-thymosins in bronchoalveolar lavage fluid and their possible involvement in the pathogenesis of scleroderma lung disease. (PMID:21314931)
- The results show, for the first time, a strong expression of thymosin beta 10 in the human salivary glands during the initial phases of the physiological development, present at the 13th week of gestation, and suggesting a role for the peptide in the salivary glands’ organogenesis. (PMID:21733645)
- hypomethylation of the promoter is not associated with its overexpression in non-small cell lung cancer (PMID:22038593)
- Amplification of thymosin beta 10 is associated with metastatic and aggressive papillary thyroid carcinomas. (PMID:22161024)
- Thymosin beta10 expression driven by the human TERT promoter induces ovarian cancer-specific apoptosis through ROS production. (PMID:22623951)
- Low expression of Tbeta10 is associated with metastatic phenotype of CCA in vitro and in vivo. (PMID:24053380)
- Regarding HCC, Tbeta4 reactivity was detected in 7/23 cases (30%) and Tbeta10 reactivity in 22/23 (97%) cases analyzed, adding HCC to human cancers that express these beta-thymosins. (PMID:24704991)
- Tbeta10 human recombinant proteins promoted the expression of VEGF-C by activating AKT phosphorylation in lung cancer cell lines. (PMID:24854554)
- High expression levels of TMSB10 correlated with lymphatic metasttases in papillary thyroid carcinoma, especially in the central neck region. (PMID:24974154)
- High expression of thymosin beta 10 is associated with hepatocellular carcinoma. (PMID:25037578)
- TMSB10 may hold promise as a minimally invasive serum cancer biomarker for the diagnosis of breast cancer and a potential therapeutic target which will facilitate the development of a novel therapeutic strategy against breast cancer. (PMID:28179017)
- Findings show high thymosin beta 10 (TMSB10) expression was remarkably associated with the advanced tumor stage, large tumor size, distant metastasis, and poor prognosis, and acted as an independent factor for predicting poor overall survival in hepatocellular carcinoma (HCC) patients. (PMID:30787051)
- TMSB10 acts as a biomarker and promotes progression of clear cell renal cell carcinoma. (PMID:32319572)
- Thymosin beta10 promotes tumor-associated macrophages M2 conversion and proliferation via the PI3K/Akt pathway in lung adenocarcinoma. (PMID:33349268)
- PTEN/AKT upregulation of TMSB10 contributes to lung cancer cell growth and predicts poor survival of the patients. (PMID:33686397)
- TMSB10 Promotes Progression of Clear Cell Renal Cell Carcinoma via JUN Transcription Regulation. (PMID:35414502)
- The Clinical Relevance and Functional Implications of Thymosin Beta-10 in Glioma. (PMID:38026448)
Cross-species orthologs
2 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Tmsb10b | ENSMUSG00000091955 |
| rattus_norvegicus | ENSRNOG00000067030 |
Protein
Protein identifiers
Thymosin beta-10 — P63313 (reviewed: P63313)
All UniProt accessions (1): P63313
UniProt curated annotations — full annotation on UniProt →
Function. Plays an important role in the organization of the cytoskeleton. Binds to and sequesters actin monomers (G actin) and therefore inhibits actin polymerization.
Subcellular location. Cytoplasm. Cytoskeleton.
Similarity. Belongs to the thymosin beta family.
RefSeq proteins (1): NP_066926* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001152 | Beta-thymosin | Family |
| IPR038386 | Beta-thymosin_sf | Homologous_superfamily |
Pfam: PF01290
UniProt features (15 total): modified residue 9, compositionally biased region 2, initiator methionine 1, chain 1, sequence variant 1, region of interest 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P63313-F1 | 73.22 | 0.00 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (9): 23, 34, 39, 41, 2, 4, 12, 15, 21
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 203 (showing top):
RNGTGGGC_UNKNOWN, MYAATNNNNNNNGGC_UNKNOWN, YAGI_AML_WITH_INV_16_TRANSLOCATION, STARK_PREFRONTAL_CORTEX_22Q11_DELETION_DN, HSIAO_HOUSEKEEPING_GENES, TATTATA_MIR374, GCM_PSME1, RICKMAN_TUMOR_DIFFERENTIATED_WELL_VS_POORLY_DN, WOO_LIVER_CANCER_RECURRENCE_UP, JIANG_TIP30_TARGETS_UP, GOBP_ACTIN_FILAMENT_ORGANIZATION, YANAGISAWA_LUNG_CANCER_RECURRENCE, LIAO_METASTASIS, SCHLOSSER_SERUM_RESPONSE_DN, WANG_IMMORTALIZED_BY_HOXA9_AND_MEIS1_DN
GO Biological Process (2): actin filament organization (GO:0007015), regulation of cell migration (GO:0030334)
GO Molecular Function (4): actin monomer binding (GO:0003785), protein sequestering activity (GO:0140311), actin binding (GO:0003779), protein binding (GO:0005515)
GO Cellular Component (2): cytoskeleton (GO:0005856), cytoplasm (GO:0005737)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| actin cytoskeleton organization | 1 |
| supramolecular fiber organization | 1 |
| cell migration | 1 |
| regulation of cell motility | 1 |
| actin binding | 1 |
| protein binding | 1 |
| molecular sequestering activity | 1 |
| cytoskeletal protein binding | 1 |
| binding | 1 |
| intracellular membraneless organelle | 1 |
| intracellular anatomical structure | 1 |
| cellular anatomical structure | 1 |
Protein interactions and networks
STRING
0 interactions, top by confidence (×1000):
IntAct
48 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| NCOA4 | FTL | psi-mi:“MI:0914”(association) | 0.790 |
| TMSB10 | ALAS1 | psi-mi:“MI:0915”(physical association) | 0.720 |
| ALAS1 | TMSB10 | psi-mi:“MI:0915”(physical association) | 0.720 |
| VPS45 | STX16 | psi-mi:“MI:0914”(association) | 0.620 |
| KRTAP9-2 | TMSB10 | psi-mi:“MI:0915”(physical association) | 0.560 |
| TMSB10 | KRTAP9-2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| GRB2 | ARHGEF35 | psi-mi:“MI:0914”(association) | 0.530 |
| TMSB10 | POT1 | psi-mi:“MI:0915”(physical association) | 0.510 |
| TMSB10 | TERF1 | psi-mi:“MI:0915”(physical association) | 0.370 |
| TMSB10 | TERF2 | psi-mi:“MI:0915”(physical association) | 0.370 |
| TMSB10 | TERF2IP | psi-mi:“MI:0915”(physical association) | 0.370 |
| OTUB1 | EPM2A | psi-mi:“MI:0914”(association) | 0.350 |
| BCAR1 | PSMD11 | psi-mi:“MI:0914”(association) | 0.350 |
| BCAR1 | MYO1C | psi-mi:“MI:0914”(association) | 0.350 |
| SH3GL3 | HMGB1P1 | psi-mi:“MI:0914”(association) | 0.350 |
| CSK | LCK | psi-mi:“MI:0914”(association) | 0.350 |
| CAV1 | PPM1G | psi-mi:“MI:0914”(association) | 0.350 |
| PEBP1 | PRPSAP2 | psi-mi:“MI:0914”(association) | 0.350 |
| SRC | ACTN4 | psi-mi:“MI:0914”(association) | 0.350 |
| HTRA4 | PSMD12 | psi-mi:“MI:0914”(association) | 0.350 |
| PRKD2 | ACOT7 | psi-mi:“MI:0914”(association) | 0.350 |
| MAPT | SHTN1 | psi-mi:“MI:0914”(association) | 0.350 |
| ACTB | ENAH | psi-mi:“MI:0914”(association) | 0.350 |
| GSTP1 | TMSB10 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (76): TMSB10 (Two-hybrid), KRTAP9-2 (Two-hybrid), TMSB10 (Affinity Capture-MS), LGALS3 (Co-fractionation), PFN1 (Co-fractionation), TMSB10 (Biochemical Activity), TMSB10 (Proximity Label-MS), TMSB10 (Proximity Label-MS), TMSB10 (Two-hybrid), TMSB10 (Two-hybrid), TMSB10 (Affinity Capture-MS), TMSB10 (Affinity Capture-MS), TMSB10 (Affinity Capture-MS), TMSB10 (Affinity Capture-MS), TMSB10 (Affinity Capture-MS)
ESM2 similar proteins: A0MD36, A2VEA7, A3KMT2, A3KMU5, O21950, O56774, O74416, P04972, P0C766, P10430, P13636, P18545, P26352, P35940, P40023, P44588, P51397, P53329, P54827, P61248, P63312, P63313, P63314, P68191, P68192, P68193, P90335, Q02651, Q04558, Q0P641, Q0THU0, Q1RBT8, Q28CI6, Q320R9, Q3Z1M3, Q54UN8, Q57Y88, Q5E969, Q5R853, Q69560
Diamond homologs: O14604, P0CG34, P0CG35, P0DX04, P18758, P20065, P21752, P21753, P26351, P26352, P33248, P34032, P62326, P62327, P62328, P62329, P63312, P63313, P63314, Q5R7H8, Q6S9C5, Q6ZWY8, Q7YRC3, Q8T697, Q95274, Q9DET5, Q9DFJ9, Q9I954, Q9I955, Q9I980, Q9W7M8
SIGNOR signaling
0 interactions.
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 58 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Signaling by BRAF and RAF1 fusions | 5 | 18.1× | 5e-04 |
| Meiotic synapsis | 5 | 15.0× | 9e-04 |
| Platelet activation, signaling and aggregation | 5 | 11.2× | 2e-03 |
| Signaling by Receptor Tyrosine Kinases | 6 | 6.6× | 5e-03 |
| Hemostasis | 7 | 5.4× | 5e-03 |
| Infectious disease | 8 | 4.2× | 7e-03 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| epidermal growth factor receptor signaling pathway | 5 | 24.3× | 4e-04 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
0 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 0 |
| Likely benign | 0 |
| Benign | 0 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
239 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 2:84906113:AGAGA:A | donor_gain | 1.0000 |
| 2:84906114:GAGA:G | donor_gain | 1.0000 |
| 2:84906114:GAGAG:G | donor_gain | 1.0000 |
| 2:84906116:GA:G | donor_gain | 1.0000 |
| 2:84906118:G:GG | donor_gain | 1.0000 |
| 2:84906002:GGATT:G | acceptor_gain | 0.9900 |
| 2:84906115:A:T | donor_gain | 0.9900 |
| 2:84906115:AGA:A | donor_gain | 0.9900 |
| 2:84906115:AGAGT:A | donor_loss | 0.9900 |
| 2:84906116:GAG:G | donor_gain | 0.9900 |
| 2:84906116:GAGTG:G | donor_loss | 0.9900 |
| 2:84906117:AGTG:A | donor_loss | 0.9900 |
| 2:84906118:GTGA:G | donor_loss | 0.9900 |
| 2:84906119:T:G | donor_loss | 0.9900 |
| 2:84905716:ACGG:A | donor_loss | 0.9800 |
| 2:84905717:CGGT:C | donor_loss | 0.9800 |
| 2:84905718:GGT:G | donor_loss | 0.9800 |
| 2:84905719:G:GG | donor_gain | 0.9800 |
| 2:84905719:G:T | donor_loss | 0.9800 |
| 2:84905720:TGAG:T | donor_loss | 0.9800 |
| 2:84905721:GAGT:G | donor_loss | 0.9800 |
| 2:84906120:G:GC | donor_loss | 0.9800 |
| 2:84906121:AGTG:A | donor_loss | 0.9800 |
| 2:84906388:GCC:G | acceptor_gain | 0.9800 |
| 2:84905714:GCACG:G | donor_gain | 0.9700 |
| 2:84906387:A:AG | acceptor_gain | 0.9600 |
| 2:84906388:G:GG | acceptor_gain | 0.9600 |
| 2:84906388:GCCAT:G | acceptor_gain | 0.9600 |
| 2:84905722:AGTG:A | donor_loss | 0.9500 |
| 2:84906122:G:C | donor_loss | 0.9500 |
AlphaMissense
292 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 2:84906054:T:C | F13L | 0.963 |
| 2:84906056:C:A | F13L | 0.963 |
| 2:84906056:C:G | F13L | 0.963 |
| 2:84906105:C:T | P30S | 0.945 |
| 2:84906106:C:A | P30Q | 0.936 |
| 2:84906070:T:C | L18P | 0.935 |
| 2:84906095:G:C | K26N | 0.924 |
| 2:84906095:G:T | K26N | 0.924 |
| 2:84906117:A:C | T34P | 0.918 |
| 2:84906105:C:A | P30T | 0.912 |
| 2:84906103:T:A | L29Q | 0.905 |
| 2:84906106:C:G | P30R | 0.898 |
| 2:84906398:A:C | Q37P | 0.885 |
| 2:84906103:T:C | L29P | 0.869 |
| 2:84906392:T:A | I35N | 0.865 |
| 2:84906070:T:A | L18Q | 0.858 |
| 2:84906093:A:G | K26E | 0.856 |
| 2:84906401:A:T | E38V | 0.849 |
| 2:84906046:T:A | I10N | 0.844 |
| 2:84906055:T:C | F13S | 0.844 |
| 2:84906402:G:C | E38D | 0.842 |
| 2:84906402:G:T | E38D | 0.842 |
| 2:84906094:A:C | K26T | 0.839 |
| 2:84906094:A:T | K26M | 0.829 |
| 2:84906109:C:T | T31I | 0.826 |
| 2:84906098:C:A | N27K | 0.825 |
| 2:84906098:C:G | N27K | 0.825 |
| 2:84906105:C:G | P30A | 0.823 |
| 2:84906092:G:C | E25D | 0.816 |
| 2:84906092:G:T | E25D | 0.816 |
dbSNP variants (sampled 300 via entrez): RS1000954437 (2:84905058 C>T), RS1001028099 (2:84905340 G>A), RS1001561956 (2:84904471 T>C), RS1001846706 (2:84904438 A>C,G), RS1001908104 (2:84905788 C>G,T), RS1002849202 (2:84904135 A>T), RS1003560588 (2:84906946 G>C), RS1003999743 (2:84906604 C>A), RS1004852032 (2:84905366 C>G), RS1005187605 (2:84903864 T>C), RS1005735474 (2:84904173 C>G), RS1006773498 (2:84905268 C>A,G), RS1007153543 (2:84905522 C>CG), RS1008531017 (2:84906535 C>T), RS1008601590 (2:84906902 T>C)
Disease associations
OMIM: gene MIM:188399 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
0 associations (top):
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL6067186 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB variants
1 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs7148 | TMSB10 | 0.00 | 0 |
ChEMBL bioactivities
2 potent at pChembl≥5 of 2 total, top 2 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 7.38 | Kd | 41.48 | nM | CHEMBL5653589 |
| 7.19 | ED50 | 64.23 | nM | CHEMBL5653589 |
PubChem BioAssay actives
1 with measured affinity, of 2 total; 1 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 4-methyl-3-[(2-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2149621: Binding affinity to human TMSB10 incubated for 45 mins by Kinobead based pull down assay | kd | 0.0415 | uM |
CTD chemical–gene interactions
53 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol A | affects expression, decreases expression | 3 |
| sodium arsenite | increases expression | 2 |
| Air Pollutants | decreases expression, increases abundance | 2 |
| Benzo(a)pyrene | increases expression | 2 |
| Tretinoin | increases expression | 2 |
| Valproic Acid | affects cotreatment, increases expression, decreases expression, increases methylation | 2 |
| Cyclosporine | increases expression | 2 |
| Particulate Matter | decreases expression, increases abundance | 2 |
| dicrotophos | decreases expression | 1 |
| methyleugenol | increases expression | 1 |
| alpha phellandrene | increases expression | 1 |
| glycidyl methacrylate | increases expression | 1 |
| tris(2-butoxyethyl) phosphate | affects expression | 1 |
| beta-lapachone | decreases expression | 1 |
| arsenite | affects binding, increases reaction | 1 |
| methylparaben | increases expression | 1 |
| nickel sulfate | increases expression | 1 |
| raltitrexed | increases expression | 1 |
| CD 437 | decreases expression | 1 |
| chloropicrin | increases expression | 1 |
| K 7174 | increases expression | 1 |
| 3-(4’-hydroxy-3’-adamantylbiphenyl-4-yl)acrylic acid | decreases expression | 1 |
| jinfukang | increases expression | 1 |
| (+)-JQ1 compound | decreases expression | 1 |
| Oxaliplatin | increases expression | 1 |
| Zoledronic Acid | decreases expression | 1 |
| Acetaminophen | increases expression | 1 |
| Carbamazepine | affects expression | 1 |
| Cisplatin | increases expression | 1 |
| Diazinon | increases methylation | 1 |
ChEMBL screening assays
1 unique, capped per target: 1 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL5652663 | Binding | Binding affinity to human TMSB10 incubated for 45 mins by Kinobead based pull down assay | NVP-BHG712: Effects of Regioisomers on the Affinity and Selectivity toward the EPHrin Family. — ChemMedChem |
Cellosaurus cell lines
2 cell lines: 1 cancer cell line, 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B1E9 | Abcam HCT 116 TMSB10 KO | Cancer cell line | Male |
| CVCL_B3JR | Abcam HEK293T TMSB10 KO | Transformed cell line | Female |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.