TNNI3
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Also known as TNNC1CMH7cTNI
Summary
TNNI3 (troponin I3, cardiac type, HGNC:11947) is a protein-coding gene on chromosome 19q13.42, encoding Troponin I, cardiac muscle (P19429). Troponin I is the inhibitory subunit of troponin, the thin filament regulatory complex which confers calcium-sensitivity to striated muscle actomyosin ATPase activity.
Troponin I (TnI), along with troponin T (TnT) and troponin C (TnC), is one of 3 subunits that form the troponin complex of the thin filaments of striated muscle. TnI is the inhibitory subunit; blocking actin-myosin interactions and thereby mediating striated muscle relaxation. The TnI subfamily contains three genes: TnI-skeletal-fast-twitch, TnI-skeletal-slow-twitch, and TnI-cardiac. This gene encodes the TnI-cardiac protein and is exclusively expressed in cardiac muscle tissues. Mutations in this gene cause familial hypertrophic cardiomyopathy type 7 (CMH7) and familial restrictive cardiomyopathy (RCM). Troponin I is useful in making a diagnosis of heart failure, and of ischemic heart disease. An elevated level of troponin is also now used as indicator of acute myocardial injury in patients hospitalized with moderate/severe Coronavirus Disease 2019 (COVID-19). Such elevation has also been associated with higher risk of mortality in cardiovascular disease patients hospitalized due to COVID-19.
Source: NCBI Gene 7137 — RefSeq curated summary.
At a glance
- Gene–disease (curated): hypertrophic cardiomyopathy (Definitive, ClinGen) — +7 more curated relationships
- GWAS associations: 2
- Clinical variants (ClinVar): 863 total — 31 pathogenic, 37 likely-pathogenic
- Phenotypes (HPO): 50
- Druggable target: yes
- Dosage sensitivity (ClinGen): haploinsufficiency little evidence, triplosensitivity no evidence
- MANE Select transcript:
NM_000363
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:11947 |
| Approved symbol | TNNI3 |
| Name | troponin I3, cardiac type |
| Location | 19q13.42 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | TNNC1, CMH7, cTNI |
| Ensembl gene | ENSG00000129991 |
| Ensembl biotype | protein_coding |
| OMIM | 191044 |
| Entrez | 7137 |
Gene structure
Transcript identifiers
Ensembl transcripts: 20 — 11 protein_coding, 5 retained_intron, 2 protein_coding_CDS_not_defined, 2 nonsense_mediated_decay
ENST00000344887, ENST00000585806, ENST00000586446, ENST00000586669, ENST00000586858, ENST00000587176, ENST00000588882, ENST00000589864, ENST00000590463, ENST00000665070, ENST00000714235, ENST00000714236, ENST00000714237, ENST00000714238, ENST00000714239, ENST00000714240, ENST00000955279, ENST00000955280, ENST00000955281, ENST00000955282
RefSeq mRNA: 1 — MANE Select: NM_000363
NM_000363
CCDS: CCDS42628
Canonical transcript exons
ENST00000344887 — 8 exons
| Exon | Start | End |
|---|---|---|
| ENSE00003489779 | 55157296 | 55157308 |
| ENSE00004023269 | 55151767 | 55151917 |
| ENSE00004023270 | 55157050 | 55157133 |
| ENSE00004023271 | 55156603 | 55156644 |
| ENSE00004023273 | 55154741 | 55154830 |
| ENSE00004023276 | 55154030 | 55154206 |
| ENSE00004023277 | 55157579 | 55157732 |
| ENSE00004023278 | 55156201 | 55156332 |
Expression profiles
Bgee: expression breadth ubiquitous, 169 present calls, max score 99.96.
FANTOM5 (CAGE): breadth broad, TPM avg 12.5057 / max 3992.6367, expressed in 368 samples.
FANTOM5 promoters (7 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 182721 | 10.1406 | 129 |
| 182719 | 0.7662 | 197 |
| 182717 | 0.5907 | 243 |
| 182718 | 0.5281 | 245 |
| 182716 | 0.3782 | 125 |
| 182715 | 0.0573 | 20 |
| 182720 | 0.0446 | 12 |
Top tissues by expression
288 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| apex of heart | UBERON:0002098 | 99.96 | gold quality |
| left ventricle myocardium | UBERON:0006566 | 99.92 | gold quality |
| right atrium auricular region | UBERON:0006631 | 99.90 | gold quality |
| cardiac atrium | UBERON:0002081 | 99.88 | gold quality |
| heart right ventricle | UBERON:0002080 | 99.81 | gold quality |
| myocardium | UBERON:0002349 | 99.74 | gold quality |
| cardiac ventricle | UBERON:0002082 | 99.70 | gold quality |
| heart left ventricle | UBERON:0002084 | 99.69 | gold quality |
| cardiac muscle of right atrium | UBERON:0003379 | 99.61 | gold quality |
| vena cava | UBERON:0004087 | 98.17 | gold quality |
| adrenal tissue | UBERON:0018303 | 96.08 | gold quality |
| heart | UBERON:0000948 | 95.76 | gold quality |
| right uterine tube | UBERON:0001302 | 92.92 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 89.35 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 86.75 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 85.42 | gold quality |
| gastrocnemius | UBERON:0001388 | 83.21 | gold quality |
| right testis | UBERON:0004534 | 83.05 | gold quality |
| left testis | UBERON:0004533 | 82.16 | gold quality |
| muscle of leg | UBERON:0001383 | 81.21 | gold quality |
| testis | UBERON:0000473 | 80.05 | gold quality |
| gluteal muscle | UBERON:0002000 | 79.04 | silver quality |
| muscle organ | UBERON:0001630 | 77.47 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 76.96 | gold quality |
| amygdala | UBERON:0001876 | 73.07 | gold quality |
| skin of abdomen | UBERON:0001416 | 72.54 | gold quality |
| skin of leg | UBERON:0001511 | 71.68 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 70.29 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 70.04 | gold quality |
| muscle tissue | UBERON:0002385 | 69.96 | gold quality |
Single-cell (SCXA)
Detected in 5 experiment(s), a significant marker in 3.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-8381 | yes | 551.21 |
| E-GEOD-134144 | yes | 31.61 |
| E-MTAB-8271 | yes | 6.37 |
| E-MTAB-11268 | no | 1942.74 |
| E-ANND-3 | no | 2.53 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): GATA4, HIF1A, MEF2A, MEF2C, MEF2D, SP1, YY1
Functional genomics
ClinGen dosage: haploinsufficiency 1 (little evidence), triplosensitivity 0 (no evidence). ClinGen Gene Dosage Map
Literature-anchored findings (GeneRIF, showing 40)
- review of current knowledge of cTnI and its relationship with unstable angina and non-ischemic cardiac damage. (PMID:11596911)
- TROPONIN I mutations in familial hypertrophic cardiomyopathy affect the regulatory processes involving TROPONIN I and increased the Ca(2+) sensitivity of cardiac muscle contraction (PMID:11735257)
- Functional analysis of a troponin I (R145G) mutation associated with familial hypertrophic cardiomyopathy (PMID:11801593)
- Two mutations in troponin I that cause hypertrophic cardiomyopathy have contrasting effects on cardiac muscle contractility (PMID:11853553)
- Bisphosphorylated cTnI arm does not interact with cTnC, but with cTnT and/or cTnI. (PMID:11904166)
- Perturbations of Thr142 phosphorylation and mutation Arg145Gly of the inhibitory region of cardiac troponin I (cIp) have an adverse effect on the binding of cIp to the Ca2+-saturated C-domain of cardiac troponin C. (PMID:12044157)
- single mutation corrects acid pH sensitivity of Ca2+-regulated actomyosin S1 ATPase (PMID:12151382)
- Cardiac troponin-I is not abnormally expressed in skeletal muscle of patients with ESRD (end stage renal disease) (PMID:12270775)
- the binding of the inhibitory region of troponin I to F-actin produces a conformational change in the actin monomer with the result that interaction at different locations of F-actin is impeded. (PMID:12383268)
- Several independent lines of evidence reveal that TNNI3 interacts with the carboxyl terminal domain (D682-V968) of polycystin 2. (PMID:12525172)
- interacts specifically with TNNI3K (PMID:12721663)
- Structure and dynamics of the C-domain of human cardiac troponin C in complex with the inhibitory region of human cardiac troponin I. (PMID:12732641)
- Plasma levels may be reliable markers of heart transplantation outcomes. (PMID:12826210)
- crystal structure of two kinds of core domain of human cardiac troponin in the Ca2+-saturated form; one at 2.6 A resolution and the other at 3.3 A resolution (PMID:12840750)
- A mutant TNNC1 (recombinant protein)interacted with levosimendan and cardiac troponin I peptides. (PMID:12967628)
- cTnI proteolysis may contribute to the pathophysiology of myocardial stunning by altering the Ca2+-sensing and chemomechanical properties of the myofilaments (PMID:14551240)
- Calpain-dependent degradation of troponin I mutants was found in familial hypertrophic cardiomyopathy. (PMID:14575308)
- Phosphorylation of mutant cardiac troponin I is linked to familial hypertrophic cardiomyopathy. (PMID:14596793)
- Modification of cardiac troponin I (cTnI) can have a pronounced effect on the binding affinity of cTnI for cardiac troponin C, which may correlate with altered cTnI myofilament function and cardiac muscle contraction under pathophysiological conditions. (PMID:14661957)
- The unphosphorylated N-terminal extension of cardiac troponin I binds to the N-terminal domain of troponin C via residues immediately terminal to the phosphorylation sites S22 and S23. Bisphosphorylation greatly weakens this binding interaction. (PMID:15049709)
- a novel TNNI3 mutation in a family with recessive disease. Functional studies showed impairment of troponin interactions that could lead to diminished myocardial contractility. TNNI3 is the first recessive gene identified for this condition. (PMID:15070570)
- Results confirm that the phosphorylation switch of cardiac troponin (Tn) I binds to troponin C via an extended interaction site spanning residues arginine-19 to alanine-34. (PMID:15134451)
- Data suggest that activation of cardiac myofilaments is tightly coupled to the open state of the N-domain of cardiac troponin C, and that pathological effects of phosphorylation are influenced by mutations in cardiac troponin I. (PMID:15147183)
- cardiac troponin I may have a role in shock and progression to organ failure leading to mortality (PMID:15257080)
- Can be used as a valid marker of acute myocardial injury in patients on maintenance dialysis. (PMID:15350489)
- NT-proBNP, cTnT, or cTnI do not have roles in acute ischemic stroke when other risk factors are considered (PMID:15604421)
- The clinical expression of cardiac troponin I mutations was very heterogeneous and varied both within and between families with no apparent mutation- or gene-specific disease pattern. (PMID:15607392)
- Gene mutations in cardiac troponin I occur in Australian families with hypertrophic cardiomyopathy with a prevalence higher than previously reported and may be associated with a clinically more malignant course (PMID:15698845)
- Impairment in the regulatory function of cardiac troponin TnI by the mutation Arg145Gly leads to modulations in crossbridge kinetics that significantly alter the dynamics of myofibrillar contraction and relaxation. (PMID:15718266)
- An inhibitory domain mutation,cTnI(146Gly), was modeled; cTnI(146Gly) expression led to a leftward shift in the force-pCa2+ curves with cardiomyocyte disarray, fibrosis, and altered connexin43 organization. (PMID:15867176)
- Data show that mutations in human cardiac troponin I that are associated with restrictive cardiomyopathy affect basal ATPase activity and the calcium sensitivity of force development. (PMID:15961398)
- The crystal structure of troponin suggests that the Ca2+-binding to the regulatory TnC site displaces the N-terminal portion of TnI from actin/tropomyosin, thereby altering mobility/flexibility of the troponin/tropomyosin strand on the actin filament. (PMID:16157639)
- both hypertrophic cardiomyopathy and restrictive cardiomyopathy involving cardiac troponin I mutations share a common feature of increased Ca2+ sensitivity of cardiac myofilament (PMID:16288990)
- Results imply a hindered transduction of the protein kinase A phosphorylation signal from cardiac troponin I to troponin C. (PMID:16302972)
- Cardiac troponin I increases after exercise in athletes. (PMID:16338248)
- The yeast cotransformation and GST fusion protein assay demonstrated the interaction between this new DSCR1L2 variant and the human cardiac troponin I. (PMID:16516408)
- beta1-adrenergic receptors are upregulated and troponin I is dephosphorylated in end-stage heart failure patients supported by ventricular assist devices (PMID:16765375)
- IgG antibodies to TpnI are increased in a significant number of patients with both idiopathic dilated and ischemic cardiomyopathy, yet it appears that these autoantibodies cannot bind heart muscle cells or influence [Ca2+]i transients (PMID:16887211)
- spectrum of mutations in cardiac hypertrophy patients (PMID:17101185)
- Mutations of cardiac troponin I that exhibit increased Ca2+ sensitivity could affect the Ca2+ transient and mechanical response of a myocyte during a single cardiac cycle. (PMID:17140583)
Cross-species orthologs
7 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Tnni3 | ENSMUSG00000035458 |
| rattus_norvegicus | Tnni3 | ENSRNOG00000018250 |
| drosophila_melanogaster | wupA | FBGN0283471 |
| caenorhabditis_elegans | WBGENE00006584 | |
| caenorhabditis_elegans | WBGENE00006585 | |
| caenorhabditis_elegans | WBGENE00006586 | |
| caenorhabditis_elegans | WBGENE00006764 |
Paralogs (2): TNNI2 (ENSG00000130598), TNNI1 (ENSG00000159173)
Protein
Protein identifiers
Troponin I, cardiac muscle — P19429 (reviewed: P19429)
Alternative names: Cardiac troponin I
All UniProt accessions (10): P19429, A0A590UJN1, A0AAQ5BHN0, A0AAQ5BHN5, A0AAQ5BHQ8, A0AAQ5BHR0, A0AAQ5BHW5, K7EJP0, K7EN02, Q6FGX2
UniProt curated annotations — full annotation on UniProt →
Function. Troponin I is the inhibitory subunit of troponin, the thin filament regulatory complex which confers calcium-sensitivity to striated muscle actomyosin ATPase activity.
Subunit / interactions. Binds to actin and tropomyosin. Interacts with TRIM63. Interacts with STK4/MST1.
Post-translational modifications. Phosphorylated at Ser-42 and Ser-44 by PRKCE; phosphorylation increases myocardium contractile dysfunction. Phosphorylated at Ser-23 and Ser-24 by PRKD1; phosphorylation reduces myofilament calcium sensitivity. Phosphorylated preferentially at Thr-31. Phosphorylation by STK4/MST1 alters its binding affinity to TNNC1 (cardiac Tn-C) and TNNT2 (cardiac Tn-T).
Disease relevance. Cardiomyopathy, familial hypertrophic, 7 (CMH7) [MIM:613690] A hereditary heart disorder characterized by ventricular hypertrophy, which is usually asymmetric and often involves the interventricular septum. The symptoms include dyspnea, syncope, collapse, palpitations, and chest pain. They can be readily provoked by exercise. The disorder has inter- and intrafamilial variability ranging from benign to malignant forms with high risk of cardiac failure and sudden cardiac death. The disease is caused by variants affecting the gene represented in this entry. Cardiomyopathy, familial restrictive 1 (RCM1) [MIM:115210] A heart disorder characterized by impaired filling of the ventricles with reduced diastolic volume, in the presence of normal or near normal wall thickness and systolic function. The disease is caused by variants affecting the gene represented in this entry. Cardiomyopathy, dilated, 2A (CMD2A) [MIM:611880] A disorder characterized by ventricular dilation and impaired systolic function, resulting in congestive heart failure and arrhythmia. Patients are at risk of premature death. The disease is caused by variants affecting the gene represented in this entry. Cardiomyopathy, dilated, 1FF (CMD1FF) [MIM:613286] A disorder characterized by ventricular dilation and impaired systolic function, resulting in congestive heart failure and arrhythmia. Patients are at risk of premature death. The disease is caused by variants affecting the gene represented in this entry.
Similarity. Belongs to the troponin I family.
RefSeq proteins (1): NP_000354* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001978 | Troponin | Family |
| IPR021666 | Troponin-I_N | Family |
| IPR038077 | Troponin_sf | Homologous_superfamily |
| IPR050875 | Troponin_I | Family |
Pfam: PF00992, PF11636
UniProt features (54 total): sequence variant 23, modified residue 18, helix 6, region of interest 3, site 2, initiator methionine 1, chain 1
Structure
Experimental structures (PDB)
39 structures, top 30 by resolution.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 8DZV | X-RAY DIFFRACTION | 1.2 |
| 7SC2 | X-RAY DIFFRACTION | 1.81 |
| 4Y99 | X-RAY DIFFRACTION | 2 |
| 7SC3 | X-RAY DIFFRACTION | 2.23 |
| 1J1D | X-RAY DIFFRACTION | 2.61 |
| 8FMO | X-RAY DIFFRACTION | 2.61 |
| 8FMT | X-RAY DIFFRACTION | 2.8 |
| 8FMN | X-RAY DIFFRACTION | 3.1 |
| 8FMM | X-RAY DIFFRACTION | 3.11 |
| 8FMR | X-RAY DIFFRACTION | 3.24 |
| 8FMP | X-RAY DIFFRACTION | 3.24 |
| 8FMQ | X-RAY DIFFRACTION | 3.25 |
| 1J1E | X-RAY DIFFRACTION | 3.3 |
| 8FMS | X-RAY DIFFRACTION | 3.44 |
| 6KN8 | ELECTRON MICROSCOPY | 4.8 |
| 7UTI | ELECTRON MICROSCOPY | 4.8 |
| 6KN7 | ELECTRON MICROSCOPY | 6.6 |
| 7UTL | ELECTRON MICROSCOPY | 6.6 |
| 1LXF | SOLUTION NMR | |
| 1MXL | SOLUTION NMR | |
| 1OZS | SOLUTION NMR | |
| 2KGB | SOLUTION NMR | |
| 2KRD | SOLUTION NMR | |
| 2L1R | SOLUTION NMR | |
| 2MZP | SOLUTION NMR | |
| 2N7L | SOLUTION NMR | |
| 5VLN | SOLUTION NMR | |
| 5W88 | SOLUTION NMR | |
| 5WCL | SOLUTION NMR | |
| 6MV3 | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P19429-F1 | 78.69 | 0.42 |
Antibody-complex structures (SAbDab): 1 — 8DZV
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (2): 80 (involved in tni-tnt interactions); 97 (involved in tni-tnt interactions)
Post-translational modifications (18): 23, 24, 26, 31, 42, 44, 51, 77, 78, 129, 143, 150, 166, 181, 199, 2, 5, 6
Function
Pathways and Gene Ontology
Reactome pathways
2 pathways
| ID | Pathway |
|---|---|
| R-HSA-390522 | Striated Muscle Contraction |
| R-HSA-5578775 | Ion homeostasis |
MSigDB gene sets: 423 (showing top):
GSE45365_NK_CELL_VS_CD8A_DC_MCMV_INFECTION_UP, GOBP_CARDIAC_CHAMBER_DEVELOPMENT, GOBP_MUSCLE_TISSUE_DEVELOPMENT, GOBP_REGULATION_OF_BLOOD_PRESSURE, GOBP_CIRCULATORY_SYSTEM_PROCESS, GOBP_CARDIAC_CHAMBER_MORPHOGENESIS, GOBP_SKELETAL_MUSCLE_ADAPTATION, GOBP_NEGATIVE_REGULATION_OF_ATP_DEPENDENT_ACTIVITY, GOBP_REGULATION_OF_SYSTEMIC_ARTERIAL_BLOOD_PRESSURE, GOBP_REGULATION_OF_SMOOTH_MUSCLE_CONTRACTION, TGACCTY_ERR1_Q2, GOBP_MULTICELLULAR_ORGANISMAL_MOVEMENT, MEF2_02, GGGTGGRR_PAX4_03, GOBP_SKELETAL_MUSCLE_CONTRACTION
GO Biological Process (14): vasculogenesis (GO:0001570), regulation of systemic arterial blood pressure by ischemic conditions (GO:0001980), skeletal muscle contraction (GO:0003009), intracellular calcium ion homeostasis (GO:0006874), regulation of smooth muscle contraction (GO:0006940), heart development (GO:0007507), regulation of cardiac muscle contraction by calcium ion signaling (GO:0010882), muscle filament sliding (GO:0030049), negative regulation of ATP-dependent activity (GO:0032780), ventricular cardiac muscle tissue morphogenesis (GO:0055010), heart contraction (GO:0060047), cardiac muscle contraction (GO:0060048), regulation of muscle contraction (GO:0006937), striated muscle contraction (GO:0006941)
GO Molecular Function (9): actin binding (GO:0003779), calcium channel inhibitor activity (GO:0019855), protein kinase binding (GO:0019901), protein domain specific binding (GO:0019904), troponin C binding (GO:0030172), troponin T binding (GO:0031014), calcium-dependent protein binding (GO:0048306), actin filament binding (GO:0051015), protein binding (GO:0005515)
GO Cellular Component (8): cytosol (GO:0005829), troponin complex (GO:0005861), sarcomere (GO:0030017), cardiac myofibril (GO:0097512), cardiac Troponin complex (GO:1990584), cytoplasm (GO:0005737), myofibril (GO:0030016), contractile muscle fiber (GO:0043292)
Reactome top-level categories
Rollup of top-2 pathways:
| Category | Pathways |
|---|---|
| Muscle contraction | 1 |
| Cardiac conduction | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| muscle contraction | 3 |
| cytoskeletal protein binding | 3 |
| cellular anatomical structure | 3 |
| striated muscle contraction | 2 |
| protein binding | 2 |
| cytoplasm | 2 |
| myofibril | 2 |
| cell differentiation | 1 |
| blood vessel morphogenesis | 1 |
| nervous system process involved in regulation of systemic arterial blood pressure | 1 |
| musculoskeletal movement | 1 |
| intracellular monoatomic cation homeostasis | 1 |
| calcium ion homeostasis | 1 |
| regulation of muscle contraction | 1 |
| smooth muscle contraction | 1 |
| animal organ development | 1 |
| circulatory system development | 1 |
| calcium-mediated signaling | 1 |
| regulation of cardiac muscle contraction | 1 |
| cardiac muscle contraction | 1 |
| actin-myosin filament sliding | 1 |
| regulation of ATP-dependent activity | 1 |
| negative regulation of molecular function | 1 |
| ATP-dependent activity | 1 |
| cardiac ventricle morphogenesis | 1 |
| ventricular cardiac muscle tissue development | 1 |
| cardiac muscle tissue morphogenesis | 1 |
| heart process | 1 |
| blood circulation | 1 |
| heart contraction | 1 |
| regulation of muscle system process | 1 |
| calcium channel regulator activity | 1 |
| calcium channel activity | 1 |
| ion channel inhibitor activity | 1 |
| kinase binding | 1 |
| calcium ion binding | 1 |
| actin binding | 1 |
| protein-containing complex binding | 1 |
| binding | 1 |
| striated muscle thin filament | 1 |
Protein interactions and networks
STRING
1744 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| TNNI3 | TNNT2 | P45379 | 999 |
| TNNI3 | TNNI3K | Q59H18 | 972 |
| TNNI3 | V9GXZ4 | V9GXZ4 | 968 |
| TNNI3 | MYBPC3 | Q14896 | 966 |
| TNNI3 | ACTC1 | P04270 | 937 |
| TNNI3 | TNNT1 | P13805 | 934 |
| TNNI3 | MYH7 | P12883 | 931 |
| TNNI3 | TPM1 | P09493 | 930 |
| TNNI3 | MYL3 | P08590 | 899 |
| TNNI3 | NPPB | P16860 | 874 |
| TNNI3 | MYL2 | P10916 | 872 |
| TNNI3 | TNNC1 | P02590 | 863 |
| TNNI3 | MYH6 | P13533 | 861 |
| TNNI3 | CSRP3 | P50461 | 845 |
| TNNI3 | TTN | Q8WZ42 | 829 |
IntAct
47 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| TNNI3 | TNNC1 | psi-mi:“MI:2364”(proximity) | 0.670 |
| TNNI3 | TNNC1 | psi-mi:“MI:0915”(physical association) | 0.670 |
| TNNC1 | TNNI3 | psi-mi:“MI:0915”(physical association) | 0.670 |
| TNNI3 | IFNA4 | psi-mi:“MI:0915”(physical association) | 0.590 |
| TNNI3 | TNNC2 | psi-mi:“MI:0915”(physical association) | 0.560 |
| RASSF10 | TNNI3 | psi-mi:“MI:0915”(physical association) | 0.560 |
| TNNI3 | PEX1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| TNNI3 | WFS1 | psi-mi:“MI:0915”(physical association) | 0.560 |
| RCAN3 | TNNI3 | psi-mi:“MI:0915”(physical association) | 0.530 |
| RCAN3 | TNNI3 | psi-mi:“MI:0407”(direct interaction) | 0.530 |
| TNNI3K | TNNI3 | psi-mi:“MI:0915”(physical association) | 0.510 |
| TNNI3 | PDE4DIP | psi-mi:“MI:0915”(physical association) | 0.440 |
| PDE4DIP | TNNI3 | psi-mi:“MI:0915”(physical association) | 0.440 |
| PDE4DIP | TNNI3 | psi-mi:“MI:0403”(colocalization) | 0.440 |
| CALM1 | TNNI3 | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| TNNI3K | TNNI3 | psi-mi:“MI:0915”(physical association) | 0.400 |
BioGRID (45): TNNI3 (Two-hybrid), TNNI3 (Two-hybrid), TNNI3 (Two-hybrid), TNNI3 (Two-hybrid), TNNI3 (Two-hybrid), TNNI3 (Two-hybrid), TNNI3 (Affinity Capture-MS), TNNI3 (Biochemical Activity), TNNC2 (Two-hybrid), IFNA4 (Affinity Capture-MS), TNNI3 (Affinity Capture-Western), MST1 (Affinity Capture-Western), TNNI3 (Biochemical Activity), TNNC1 (Reconstituted Complex), TNNT2 (Reconstituted Complex)
ESM2 similar proteins: A0A8I6A2H6, A2AQ19, A4IG32, A5D7A0, D4A1F2, F1MF74, O12940, O14730, O35685, O43395, O43815, O55106, O60784, O88448, O88746, O94851, P08057, P13789, P19429, P50751, P70483, P97366, Q13435, Q17QG2, Q17QM6, Q1RMT7, Q2KIA6, Q3UJB0, Q4FZY0, Q5PQM2, Q5PYI0, Q5R5F1, Q5RDI4, Q63525, Q863B6, Q86XE3, Q8BML1, Q8MKD5, Q922U1, Q92541
Diamond homologs: O44572, P02643, P02645, P02646, P08057, P13412, P13413, P19237, P19429, P23693, P27672, P27673, P27768, P36188, P48787, P48788, P50754, P68246, P68247, Q20334, Q5PYI0, Q7M3Y3, Q863B6, Q8MKD5, Q969A1, Q9GYF1, Q9WUZ5, P05547, P06398, Q9XUN9
SIGNOR signaling
28 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| PAK3 | down-regulates | TNNI3 | phosphorylation |
| PPP2CA | down-regulates | TNNI3 | dephosphorylation |
| PRKACA | “up-regulates activity” | TNNI3 | phosphorylation |
| PRKCA | down-regulates | TNNI3 | phosphorylation |
| PRKCB | down-regulates | TNNI3 | phosphorylation |
| PRKCG | down-regulates | TNNI3 | phosphorylation |
| PRKG1 | “up-regulates activity” | TNNI3 | phosphorylation |
| PRKCD | “up-regulates activity” | TNNI3 | phosphorylation |
| PRKCD | down-regulates | TNNI3 | phosphorylation |
| STK4 | unknown | TNNI3 | phosphorylation |
| PAK3 | unknown | TNNI3 | phosphorylation |
| PRKCA | unknown | TNNI3 | phosphorylation |
| PRKCA | “up-regulates activity” | TNNI3 | phosphorylation |
| PRKCA | “down-regulates activity” | TNNI3 | phosphorylation |
Disease & clinical
Clinical variants and AI predictions
ClinVar
863 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 31 |
| Likely pathogenic | 37 |
| Uncertain significance | 412 |
| Likely benign | 252 |
| Benign | 23 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 12419 | NM_000363.5(TNNI3):c.433C>G (p.Arg145Gly) | Pathogenic |
| 12420 | NM_000363.5(TNNI3):c.616A>C (p.Lys206Gln) | Pathogenic |
| 12423 | NM_000363.5(TNNI3):c.569A>G (p.Asp190Gly) | Pathogenic |
| 12424 | NM_000363.5(TNNI3):c.575G>A (p.Arg192His) | Pathogenic |
| 12425 | NM_000363.5(TNNI3):c.532A>G (p.Lys178Glu) | Pathogenic |
| 12426 | NM_000363.5(TNNI3):c.433C>T (p.Arg145Trp) | Pathogenic |
| 12428 | NM_000363.5(TNNI3):c.431T>A (p.Leu144Gln) | Pathogenic |
| 12430 | NM_000363.5(TNNI3):c.106A>C (p.Lys36Gln) | Pathogenic |
| 12431 | NM_000363.5(TNNI3):c.555C>G (p.Asn185Lys) | Pathogenic |
| 12432 | NM_000363.5(TNNI3):c.607G>A (p.Gly203Ser) | Pathogenic |
| 12433 | NM_000363.5(TNNI3):c.547_549del (p.Lys183del) | Pathogenic |
| 12434 | NM_000363.5(TNNI3):c.61C>T (p.Arg21Cys) | Pathogenic |
| 1409842 | NM_000363.5(TNNI3):c.549G>T (p.Lys183Asn) | Pathogenic |
| 1449490 | NC_000019.9:g.(?55667549)(55668957_?)del | Pathogenic |
| 1686263 | NM_000363.5(TNNI3):c.130T>G (p.Ser44Ala) | Pathogenic |
| 180551 | NM_000363.5(TNNI3):c.522G>C (p.Lys174Asn) | Pathogenic |
| 181586 | NM_000363.5(TNNI3):c.547A>G (p.Lys183Glu) | Pathogenic |
| 181587 | NM_000363.5(TNNI3):c.548A>C (p.Lys183Thr) | Pathogenic |
| 181593 | NM_000363.5(TNNI3):c.616A>G (p.Lys206Glu) | Pathogenic |
| 181594 | NM_000363.5(TNNI3):c.617A>T (p.Lys206Ile) | Pathogenic |
| 1994254 | NM_000363.5(TNNI3):c.509G>C (p.Arg170Pro) | Pathogenic |
| 2088003 | NM_000363.5(TNNI3):c.98del (p.Pro33fs) | Pathogenic |
| 235062 | NM_000363.5(TNNI3):c.523C>T (p.Gln175Ter) | Pathogenic |
| 2798268 | NM_000363.5(TNNI3):c.187C>T (p.Arg63Ter) | Pathogenic |
| 3706410 | NM_000363.5(TNNI3):c.55_58del (p.Ile19fs) | Pathogenic |
| 3716789 | NM_000363.5(TNNI3):c.154_155del (p.Leu52fs) | Pathogenic |
| 3723680 | NM_000363.5(TNNI3):c.280C>T (p.Gln94Ter) | Pathogenic |
| 3775215 | NM_000363.5(TNNI3):c.295C>T (p.Gln99Ter) | Pathogenic |
| 525007 | NM_000363.5(TNNI3):c.190G>T (p.Glu64Ter) | Pathogenic |
| 625672 | GRCh37/hg19 19q13.42(chr19:55652193-55665240) | Pathogenic |
SpliceAI
1361 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 19:55154028:A:AC | donor_gain | 1.0000 |
| 19:55154028:AC:A | donor_gain | 1.0000 |
| 19:55154029:C:CT | donor_gain | 1.0000 |
| 19:55154029:CC:C | donor_gain | 1.0000 |
| 19:55154029:CCTT:C | donor_gain | 1.0000 |
| 19:55154203:CAAT:C | acceptor_gain | 1.0000 |
| 19:55154205:AT:A | acceptor_gain | 1.0000 |
| 19:55154207:C:CC | acceptor_gain | 1.0000 |
| 19:55154736:C:A | donor_gain | 1.0000 |
| 19:55154738:CA:C | donor_loss | 1.0000 |
| 19:55154742:T:TA | donor_gain | 1.0000 |
| 19:55154755:TGGTG:T | donor_gain | 1.0000 |
| 19:55154826:AAGTC:A | acceptor_gain | 1.0000 |
| 19:55156154:CTG:C | donor_gain | 1.0000 |
| 19:55157280:AG:A | donor_gain | 1.0000 |
| 19:55157577:AC:A | donor_gain | 1.0000 |
| 19:55157578:CC:C | donor_gain | 1.0000 |
| 19:55154029:CCT:C | donor_gain | 0.9900 |
| 19:55154204:AAT:A | acceptor_gain | 0.9900 |
| 19:55154214:C:CT | acceptor_gain | 0.9900 |
| 19:55154743:C:A | donor_gain | 0.9900 |
| 19:55154766:G:A | donor_gain | 0.9900 |
| 19:55154827:AGTC:A | acceptor_gain | 0.9900 |
| 19:55154828:GTC:G | acceptor_gain | 0.9900 |
| 19:55154829:TC:T | acceptor_gain | 0.9900 |
| 19:55154830:CC:C | acceptor_gain | 0.9900 |
| 19:55154830:CCT:C | acceptor_loss | 0.9900 |
| 19:55154831:C:CC | acceptor_gain | 0.9900 |
| 19:55156153:A:AC | donor_gain | 0.9900 |
| 19:55156154:C:CC | donor_gain | 0.9900 |
AlphaMissense
1356 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 19:55151894:C:A | W191C | 0.999 |
| 19:55151894:C:G | W191C | 0.999 |
| 19:55151896:A:G | W191R | 0.999 |
| 19:55151896:A:T | W191R | 0.999 |
| 19:55151893:G:T | R192S | 0.998 |
| 19:55154196:A:G | L128P | 0.998 |
| 19:55151843:A:C | F208L | 0.997 |
| 19:55151843:A:T | F208L | 0.997 |
| 19:55151845:A:G | F208L | 0.997 |
| 19:55151892:C:G | R192P | 0.996 |
| 19:55151895:C:G | W191S | 0.996 |
| 19:55154057:C:A | K174N | 0.996 |
| 19:55154057:C:G | K174N | 0.996 |
| 19:55154141:T:A | R146S | 0.996 |
| 19:55154141:T:G | R146S | 0.996 |
| 19:55156618:T:A | R45S | 0.996 |
| 19:55156618:T:G | R45S | 0.996 |
| 19:55154162:A:C | F139L | 0.995 |
| 19:55154162:A:T | F139L | 0.995 |
| 19:55154164:A:G | F139L | 0.995 |
| 19:55156603:C:A | K50N | 0.995 |
| 19:55156603:C:G | K50N | 0.995 |
| 19:55151857:G:T | R204S | 0.994 |
| 19:55156607:A:G | L49P | 0.994 |
| 19:55156619:C:A | R45I | 0.994 |
| 19:55156619:C:G | R45T | 0.994 |
| 19:55154148:A:T | L144Q | 0.993 |
| 19:55151852:C:A | K205N | 0.992 |
| 19:55151852:C:G | K205N | 0.992 |
| 19:55154059:T:C | K174E | 0.992 |
dbSNP variants (sampled 300 via entrez): RS1000432255 (19:55154579 A>G), RS1000664929 (19:55152984 C>T), RS1001204026 (19:55153502 G>A), RS1001722246 (19:55156094 G>A,C,T), RS1001943340 (19:55153570 T>C), RS1002459450 (19:55153805 C>T), RS1004452697 (19:55157181 G>C), RS1005194590 (19:55156171 T>G), RS1005410944 (19:55158727 C>A,T), RS1005638211 (19:55155032 C>A), RS1006359783 (19:55152528 A>T), RS1006667799 (19:55158926 G>A,C,T), RS1006701954 (19:55152040 G>A,C,T), RS1007339293 (19:55156004 G>A,C), RS1007350495 (19:55154626 T>A,C)
Disease associations
OMIM: gene MIM:191044 | disease phenotypes: MIM:115210, MIM:611880, MIM:613690, MIM:613286, MIM:105210, MIM:192600, MIM:115200, MIM:605355, MIM:614742
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| dilated cardiomyopathy 2A | Definitive | Autosomal recessive |
| hypertrophic cardiomyopathy | Definitive | Autosomal dominant |
| hypertrophic cardiomyopathy 7 | Definitive | Autosomal dominant |
| cardiomyopathy, familial restrictive, 1 | Strong | Autosomal dominant |
| dilated cardiomyopathy 1FF | Strong | Autosomal dominant |
| familial isolated dilated cardiomyopathy | Supportive | Autosomal dominant |
| familial isolated restrictive cardiomyopathy | Supportive | Autosomal dominant |
| arrhythmogenic right ventricular cardiomyopathy | No Known Disease Relationship | Autosomal dominant |
ClinGen Gene-Disease Validity (4)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| arrhythmogenic right ventricular cardiomyopathy | No Known Disease Relationship | AD |
| hypertrophic cardiomyopathy | Definitive | AD |
| dilated cardiomyopathy 1FF | Strong | AD |
| dilated cardiomyopathy 2A | Strong | AR |
Mondo (22): hypertrophic cardiomyopathy (MONDO:0005045), cardiomyopathy (MONDO:0004994), cardiomyopathy, familial restrictive, 1 (MONDO:0007270), dilated cardiomyopathy 2A (MONDO:0012746), hypertrophic cardiomyopathy 7 (MONDO:0013369), dilated cardiomyopathy 1FF (MONDO:0013211), amyloidosis, hereditary systemic 1 (MONDO:0971004), familial hypertrophic cardiomyopathy (MONDO:0024573), restrictive cardiomyopathy (MONDO:0005201), myocarditis (MONDO:0004496), dilated cardiomyopathy (MONDO:0005021), familial dilated cardiomyopathy (MONDO:0016333), nemaline myopathy 5 (MONDO:0011539), pulmonary fibrosis and/or bone marrow failure, Telomere-related, 1 (MONDO:0013878), hypertrophic cardiomyopathy 1 (MONDO:0008647)
Orphanet (15): Rare hypertrophic cardiomyopathy (Orphanet:217569), Rare cardiomyopathy (Orphanet:167848), Familial isolated dilated cardiomyopathy (Orphanet:154), Familial isolated restrictive cardiomyopathy (Orphanet:75249), ATTRV30M amyloidosis (Orphanet:85447), ATTRV122I amyloidosis (Orphanet:85451), Rare familial disorder with hypertrophic cardiomyopathy (Orphanet:99739), Restrictive cardiomyopathy (Orphanet:217632), Dilated cardiomyopathy (Orphanet:217604), Familial dilated cardiomyopathy (Orphanet:217607), Amish nemaline myopathy (Orphanet:98902), Idiopathic aplastic anemia (Orphanet:88), Familial restrictive cardiomyopathy (Orphanet:217635), Familial dilated cardiomyopathy with conduction defect due to LMNA mutation (Orphanet:300751), NON RARE IN EUROPE: Familial isolated hypertrophic cardiomyopathy (Orphanet:155)
HPO phenotypes
50 total (30 of 50 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000407 | Sensorineural hearing impairment |
| HP:0000969 | Edema |
| HP:0001279 | Syncope |
| HP:0001297 | Stroke |
| HP:0001635 | Congestive heart failure |
| HP:0001639 | Hypertrophic cardiomyopathy |
| HP:0001644 | Dilated cardiomyopathy |
| HP:0001645 | Sudden cardiac death |
| HP:0001653 | Mitral regurgitation |
| HP:0001712 | Left ventricular hypertrophy |
| HP:0001714 | Ventricular hypertrophy |
| HP:0001716 | Wolff-Parkinson-White syndrome |
| HP:0001723 | Restrictive cardiomyopathy |
| HP:0001727 | Thromboembolic stroke |
| HP:0001907 | Thromboembolism |
| HP:0002094 | Dyspnea |
| HP:0002119 | Ventriculomegaly |
| HP:0002205 | Recurrent respiratory infections |
| HP:0002240 | Hepatomegaly |
| HP:0002875 | Exertional dyspnea |
| HP:0003198 | Myopathy |
| HP:0003457 | EMG abnormality |
| HP:0003581 | Adult onset |
| HP:0003596 | Middle age onset |
| HP:0003621 | Juvenile onset |
| HP:0005110 | Atrial fibrillation |
| HP:0005115 | Supraventricular arrhythmia |
| HP:0005162 | Abnormal left ventricular function |
GWAS associations
2 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST90002393_674 | Monocyte count | 7.000000e-14 |
| GCST90002402_574 | Platelet count | 5.000000e-10 |
EFO canonical traits (2, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0005091 | monocyte count |
| EFO:0004309 | platelet count |
MeSH disease descriptors (12)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D019571 | Arrhythmogenic Right Ventricular Dysplasia | C14.240.400.145; C14.280.238.028; C14.280.400.145; C16.131.240.400.145 |
| D009202 | Cardiomyopathies | C14.280.238 |
| D002311 | Cardiomyopathy, Dilated | C14.280.195.160; C14.280.238.070; C16.320.488.750 |
| D002312 | Cardiomyopathy, Hypertrophic | C14.280.238.100; C14.280.484.048.750.070.160 |
| D024741 | Cardiomyopathy, Hypertrophic, Familial | C14.280.238.100.500; C14.280.484.048.750.070.160.500; C16.320.160 |
| D002313 | Cardiomyopathy, Restrictive | C14.280.238.160 |
| D008133 | Long QT Syndrome | C14.280.067.565; C14.280.123.625; C16.131.240.400.715; C23.550.073.547 |
| D009205 | Myocarditis | C14.280.238.625 |
| C567654 | Cardiomyopathy, Dilated, 1FF (supp.) | |
| C566168 | Cardiomyopathy, Familial Restrictive, 1 (supp.) | |
| C538397 | Nemaline myopathy 5 (supp.) | |
| C536231 | familial dilated cardiomyopathy (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL2095202 (PROTEIN COMPLEX)
PharmGKB: 1 entry (VIP=true, CPIC=false)
ChEMBL bioactivities
81 potent at pChembl≥5 of 118 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 6.78 | EC50 | 164.6 | nM | CHEMBL3195681 |
| 6.78 | EC50 | 165.1 | nM | CHEMBL1581326 |
| 6.72 | EC50 | 190.7 | nM | CHEMBL3195851 |
| 6.55 | EC50 | 278.9 | nM | CHEMBL1468444 |
| 6.54 | EC50 | 286.9 | nM | CHEMBL1379673 |
| 6.40 | EC50 | 397 | nM | CHEMBL1477915 |
| 6.38 | EC50 | 413 | nM | CHEMBL1398812 |
| 6.30 | EC50 | 500.5 | nM | CHEMBL1369691 |
| 6.29 | EC50 | 515.8 | nM | CHEMBL1573529 |
| 6.25 | IC50 | 558.1 | nM | PYROGALLOL RED |
| 6.25 | EC50 | 565.4 | nM | CHEMBL3197404 |
| 6.21 | EC50 | 615.4 | nM | CHEMBL1388372 |
| 6.17 | IC50 | 676.8 | nM | CHEMBL1425538 |
| 6.13 | EC50 | 742 | nM | CHEMBL1604510 |
| 6.12 | EC50 | 760.7 | nM | CHEMBL1550816 |
| 6.07 | EC50 | 852.9 | nM | CHEMBL1725987 |
| 6.06 | EC50 | 869.6 | nM | CHEMBL1586687 |
| 5.96 | EC50 | 1101 | nM | CHEMBL1975147 |
| 5.95 | EC50 | 1113 | nM | CHEMBL1313968 |
| 5.94 | EC50 | 1143 | nM | CHEMBL1429070 |
| 5.94 | EC50 | 1137 | nM | CHEMBL1310204 |
| 5.92 | EC50 | 1209 | nM | CHEMBL1713654 |
| 5.86 | EC50 | 1369 | nM | CHEMBL1501273 |
| 5.84 | EC50 | 1438 | nM | CHEMBL1977499 |
| 5.83 | EC50 | 1465 | nM | CHEMBL1499258 |
| 5.81 | EC50 | 1537 | nM | CHEMBL1542169 |
| 5.81 | EC50 | 1548 | nM | CHEMBL1574521 |
| 5.80 | EC50 | 1577 | nM | CHEMBL1407632 |
| 5.79 | IC50 | 1640 | nM | CHEMBL1563898 |
| 5.74 | IC50 | 1819 | nM | CHEMBL1356785 |
| 5.74 | EC50 | 1830 | nM | CHEMBL1586067 |
| 5.73 | EC50 | 1863 | nM | CHEMBL1971695 |
| 5.73 | EC50 | 1878 | nM | CHEMBL1576905 |
| 5.70 | EC50 | 1981 | nM | CHEMBL1701437 |
| 5.69 | EC50 | 2022 | nM | CHEMBL1466913 |
| 5.66 | EC50 | 2177 | nM | CHEMBL1576602 |
| 5.65 | EC50 | 2218 | nM | CHEMBL1462008 |
| 5.62 | EC50 | 2385 | nM | CHEMBL1540557 |
| 5.59 | EC50 | 2576 | nM | CHEMBL1466606 |
| 5.59 | EC50 | 2574 | nM | CHEMBL1725983 |
| 5.57 | IC50 | 2724 | nM | CHEMBL1362935 |
| 5.57 | EC50 | 2706 | nM | CHEMBL1557186 |
| 5.56 | EC50 | 2780 | nM | CHEMBL2004884 |
| 5.54 | EC50 | 2901 | nM | CHEMBL1547468 |
| 5.54 | EC50 | 2918 | nM | CHEMBL1311198 |
| 5.50 | IC50 | 3191 | nM | CHEMBL1601846 |
| 5.48 | EC50 | 3326 | nM | CHEMBL1596655 |
| 5.46 | IC50 | 3446 | nM | CHEMBL1424694 |
| 5.44 | IC50 | 3615 | nM | PURPUROGALLIN |
| 5.43 | EC50 | 3734 | nM | CHEMBL1594911 |
CTD chemical–gene interactions
43 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| trichostatin A | affects cotreatment, decreases expression, affects expression | 4 |
| Doxorubicin | affects expression, decreases expression | 4 |
| Valproic Acid | increases expression, increases methylation, affects expression | 3 |
| methylmercuric chloride | decreases expression | 2 |
| Benzo(a)pyrene | affects methylation, increases expression | 2 |
| Cisplatin | affects expression, affects cotreatment, increases expression | 2 |
| Cyclophosphamide | increases expression | 2 |
| Phenylmercuric Acetate | affects cotreatment, decreases expression | 2 |
| Tretinoin | affects expression, decreases expression | 2 |
| dicrotophos | decreases expression | 1 |
| propionaldehyde | increases expression | 1 |
| bisphenol A | decreases expression | 1 |
| tris(1,3-dichloro-2-propyl)phosphate | decreases expression, increases expression | 1 |
| butyraldehyde | increases expression | 1 |
| pentanal | increases expression | 1 |
| entinostat | increases expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, decreases expression | 1 |
| dorsomorphin | affects cotreatment, decreases expression | 1 |
| jinfukang | increases expression, affects cotreatment | 1 |
| ponatinib | increases secretion | 1 |
| 2,3,5-trichloro-6-phenyl-(1,4)benzoquinone | increases expression | 1 |
| Decitabine | affects expression | 1 |
| Sunitinib | decreases expression | 1 |
| Vorinostat | increases expression | 1 |
| Acetaminophen | increases expression | 1 |
| Aldehydes | increases expression | 1 |
| Aspirin | increases expression | 1 |
| Cadmium | decreases expression | 1 |
| Carbamazepine | affects expression | 1 |
| Cocaine | increases secretion | 1 |
ChEMBL screening assays
2 unique, capped per target: 2 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1738244 | Binding | PUBCHEM_BIOASSAY: Fluorescence-based biochemical high throughput dose response assay for inhibitors of the calcium sensitivity of cardiac Regulated Thin Filaments (RTF). (Class of assay: confirmatory) [Related pubchem assays (depositor defi | PubChem BioAssay data set |
Cellosaurus cell lines
3 cell lines: 3 induced pluripotent stem cell
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B0PJ | SCVIi017-A | Induced pluripotent stem cell | Female |
| CVCL_B0PK | SCVIi018-A | Induced pluripotent stem cell | Male |
| CVCL_B0PL | SCVIi019-A | Induced pluripotent stem cell | Male |
Clinical trials (associated diseases)
254 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00879060 | PHASE4 | COMPLETED | Clinical and Therapeutic Implications of Fibrosis in Hypertrophic Cardiomyopathy |
| NCT01721967 | PHASE4 | COMPLETED | Ranolazine for the Treatment of Chest Pain in HCM Patients |
| NCT02948998 | PHASE4 | UNKNOWN | Evaluating the Effect of Spironolactone on Hypertrophic Cardiomyopathy |
| NCT03249272 | PHASE4 | TERMINATED | Microvascular Dysfunction in Nonischemic Cardiomyopathy: Insights From CMR Assessment of Coronary Flow Reserve |
| NCT04133532 | PHASE4 | COMPLETED | Effect of Metoprolol in Post Alcohol Septal Ablation Patients With Hypertrophic Cardiomyopathy |
| NCT06401343 | PHASE4 | RECRUITING | Use of SGLT2i in noHCM With HFpEF |
| NCT07103655 | PHASE4 | NOT_YET_RECRUITING | The Therapeutic Value of Mavacamten in Hypertrophic Cardiomyopathy With Mid-to-Apical Left Ventricular Obstruction |
| NCT07600177 | PHASE4 | RECRUITING | Mavacamten to Aficamten Transition in Patients With Obstructive Hypertrophic Cardiomyopathy |
| NCT00317967 | PHASE3 | COMPLETED | Study to Determine if Atorvastatin Reduces Size and Stiffness of Muscle in the Left Ventricle of the Heart |
| NCT00698074 | PHASE3 | UNKNOWN | Diastolic Ventricular Interaction and the Effects of Biventricular Pacing in Hypertrophic Cardiomyopathy |
| NCT00821353 | PHASE3 | COMPLETED | Antiarrhythmic Therapy Versus Catheter Ablation for Atrial Fibrillation in Hypertrophic Cardiomyopathy |
| NCT02431221 | PHASE3 | WITHDRAWN | Efficacy, Safety, and Tolerability of Perhexiline in Subjects With Hypertrophic Cardiomyopathy and Heart Failure |
| NCT03470545 | PHASE3 | COMPLETED | Clinical Study to Evaluate Mavacamten (MYK-461) in Adults With Symptomatic Obstructive Hypertrophic Cardiomyopathy |
| NCT05174416 | PHASE3 | COMPLETED | A Study to Evaluate the Efficacy and Safety of Mavacamten in Chinese Adults With Symptomatic Obstructive HCM |
| NCT05182658 | PHASE3 | ACTIVE_NOT_RECRUITING | Empagliflozin in Hypertrophic Cardiomyopathy |
| NCT05186818 | PHASE3 | COMPLETED | Phase 3 Trial to Evaluate the Efficacy and Safety of Aficamten Compared to Placebo in Adults With Symptomatic oHCM |
| NCT05767346 | PHASE3 | COMPLETED | Phase 3 Trial to Evaluate the Efficacy and Safety of Aficamten Compared to Metoprolol Succinate in Adults With Symptomatic oHCM |
| NCT06116968 | PHASE3 | COMPLETED | An Open-Label Study of Aficamten for Chinese Patients With Symptomatic oHCM |
| NCT06873828 | PHASE3 | NOT_YET_RECRUITING | Evaluation of the Efficacy and Safety of Wearable ECG (AT-Patch) in Patients With Hypertrophic Cardiomyopathy Requiring 48-Hour Holter MonitoringEvaluation of the Efficacy and Safety of Wearable ECG (AT-Patch) in Patients With Hypertrophic Cardiomyopathy Requiring 48-Hour Holter Monitoring |
| NCT07021976 | PHASE3 | RECRUITING | A Phase III Trial of HRS-1893 in Patients With Obstructive Hypertrophic Cardiomyopathy |
| NCT07023341 | PHASE3 | ACTIVE_NOT_RECRUITING | A Study to Learn More About How Well Aficamten Works in Japanese Participants With Symptomatic Obstructive Hypertrophic Cardiomyopathy |
| NCT07202897 | PHASE3 | NOT_YET_RECRUITING | LA-HCM Study : Rivaroxaban for Antithrombotic Prevention in Hypertrophic Cardiomyopathy Patients With Abnormal Left Atrial Strain. |
| NCT00001631 | PHASE2 | COMPLETED | Study of Blood Flow in Heart Muscle |
| NCT00001894 | PHASE2 | COMPLETED | A Comparison of Two Treatments: Pacemaker and Percutaneous Transluminal Septal Ablation for Hypertrophic Cardiomyopathy |
| NCT00001960 | PHASE2 | COMPLETED | Studying the Effectiveness of Pacemaker Therapy in Children Who Have Thickened Heart Muscle |
| NCT00011076 | PHASE2 | COMPLETED | Pirfenidone to Treat Hypertrophic Cardiomyopathy |
| NCT00035386 | PHASE2 | COMPLETED | Alcohol Septal Ablation in Obstructive Hypertrophic Cardiomyopathy: A Pilot Study |
| NCT00430833 | PHASE2 | UNKNOWN | CHANCE - Candesartan in Hypertrophic Cardiomyopathy |
| NCT00500552 | PHASE2 | COMPLETED | Perhexiline Therapy in Patients With Hypertrophic Cardiomyopathy |
| NCT01150461 | PHASE2 | COMPLETED | Effect of Losartan in Patients With Nonobstructive Hypertrophic Cardiomyopathy |
| NCT01230918 | PHASE2 | TERMINATED | Study to Develop a Non-invasive Marker for Monitoring Myocardial Fibrosis |
| NCT01447654 | PHASE2 | COMPLETED | Inhibition of the Renin Angiotensin System With Losartan in Patients With Hypertrophic Cardiomyopathy |
| NCT01696370 | PHASE2 | UNKNOWN | Trimetazidine Therapy in Hypertrophic Cardiomyopathy |
| NCT01912534 | PHASE2 | COMPLETED | Valsartan for Attenuating Disease Evolution In Early Sarcomeric HCM |
| NCT02590809 | PHASE2 | COMPLETED | Hypertrophic Cardiomyopathy Symptom Release by BX1514M |
| NCT03496168 | PHASE2 | COMPLETED | Extension Study of Mavacamten (MYK-461) in Adults With Symptomatic Obstructive Hypertrophic Cardiomyopathy Previously Enrolled in PIONEER |
| NCT03532802 | PHASE2 | COMPLETED | The Effect of Metoprolol in Patients With Hypertrophic Obstructive Cardiomyopathy. |
| NCT03832660 | PHASE2 | COMPLETED | Sacubitril/Valsartan vs Lifestyle in Hypertrophic Cardiomyopathy |
| NCT04219826 | PHASE2 | COMPLETED | Dose-finding Study to Evaluate the Safety, Tolerability, Pharmacokinetics, and Pharmacodynamics of CK-3773274 in Adults With Hypertrophic Cardiomyopathy |
| NCT04426578 | PHASE2 | UNKNOWN | Role of Perhexiline in Hypertrophic Cardiomyopathy |
Related Atlas pages
- Associated diseases: dilated cardiomyopathy 2A, hypertrophic cardiomyopathy, arrhythmogenic right ventricular cardiomyopathy, cardiomyopathy, familial restrictive, 1, dilated cardiomyopathy 1FF, hypertrophic cardiomyopathy 7, familial isolated dilated cardiomyopathy
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): amyloidosis, hereditary systemic 1, arrhythmogenic right ventricular cardiomyopathy, cardiomyopathy, cardiomyopathy, familial restrictive, 1, dilated cardiomyopathy, dilated cardiomyopathy 1A, dilated cardiomyopathy 1FF, dilated cardiomyopathy 2A, familial dilated cardiomyopathy, familial hypertrophic cardiomyopathy, familial restrictive cardiomyopathy, hypertrophic cardiomyopathy, hypertrophic cardiomyopathy 1, hypertrophic cardiomyopathy 7, long QT syndrome, myocarditis, nemaline myopathy 5, pulmonary fibrosis and/or bone marrow failure, Telomere-related, 1, restrictive cardiomyopathy, sudden cardiac arrest