TP73
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Also known as P73
Summary
TP73 (tumor protein p73, HGNC:12003) is a protein-coding gene on chromosome 1p36.32, encoding Tumor protein p73 (O15350). Participates in the apoptotic response to DNA damage.
This gene encodes a member of the p53 family of transcription factors involved in cellular responses to stress and development. It maps to a region on chromosome 1p36 that is frequently deleted in neuroblastoma and other tumors, and thought to contain multiple tumor suppressor genes. The demonstration that this gene is monoallelically expressed (likely from the maternal allele), supports the notion that it is a candidate gene for neuroblastoma. Many transcript variants resulting from alternative splicing and/or use of alternate promoters have been found for this gene, but the biological validity and the full-length nature of some variants have not been determined.
Source: NCBI Gene 7161 — RefSeq curated summary.
At a glance
- Gene–disease (curated): ciliary dyskinesia, primary, 47, and lissencephaly (Strong, ClinGen)
- GWAS associations: 6
- Clinical variants (ClinVar): 134 total — 4 pathogenic, 1 likely-pathogenic
- Phenotypes (HPO): 12
- Dosage sensitivity (ClinGen): haploinsufficiency no evidence, triplosensitivity no evidence
- Transcription factor: yes — 133 downstream targets (CollecTRI)
- MANE Select transcript:
NM_005427
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:12003 |
| Approved symbol | TP73 |
| Name | tumor protein p73 |
| Location | 1p36.32 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | P73 |
| Ensembl gene | ENSG00000078900 |
| Ensembl biotype | protein_coding |
| OMIM | 601990 |
| Entrez | 7161 |
Gene structure
Transcript identifiers
Ensembl transcripts: 18 — 14 protein_coding, 3 retained_intron, 1 protein_coding_CDS_not_defined
ENST00000354437, ENST00000378280, ENST00000378285, ENST00000378288, ENST00000378290, ENST00000378295, ENST00000603362, ENST00000603364, ENST00000604074, ENST00000604194, ENST00000604479, ENST00000604566, ENST00000713570, ENST00000713571, ENST00000713572, ENST00000908821, ENST00000917568, ENST00000917569
RefSeq mRNA: 13 — MANE Select: NM_005427
NM_001126240, NM_001126241, NM_001126242, NM_001204184, NM_001204185, NM_001204186, NM_001204187, NM_001204188, NM_001204189, NM_001204190, NM_001204191, NM_001204192, NM_005427
CCDS: CCDS44049, CCDS44050, CCDS44051, CCDS49, CCDS55566, CCDS55567, CCDS55568, CCDS55569, CCDS59965
Canonical transcript exons
ENST00000378295 — 14 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000358575 | 3683060 | 3683180 |
| ENSE00000733990 | 3730000 | 3730148 |
| ENSE00000868857 | 3682333 | 3682430 |
| ENSE00003461431 | 3730927 | 3731065 |
| ENSE00003496607 | 3707549 | 3707791 |
| ENSE00003503102 | 3727628 | 3727770 |
| ENSE00003526787 | 3723354 | 3723469 |
| ENSE00003637380 | 3731463 | 3731556 |
| ENSE00003646577 | 3727115 | 3727224 |
| ENSE00003651642 | 3728129 | 3728217 |
| ENSE00003659615 | 3732747 | 3736201 |
| ENSE00003670865 | 3722021 | 3722207 |
| ENSE00003693819 | 3729327 | 3729448 |
| ENSE00003848342 | 3652516 | 3652641 |
Expression profiles
Bgee: expression breadth ubiquitous, 132 present calls, max score 89.66.
FANTOM5 (CAGE): breadth broad, TPM avg 3.9534 / max 593.9393, expressed in 513 samples.
FANTOM5 promoters (17 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 306 | 1.8131 | 363 |
| 307 | 0.4338 | 223 |
| 308 | 0.3470 | 174 |
| 301 | 0.3071 | 188 |
| 302 | 0.2299 | 135 |
| 304 | 0.2280 | 118 |
| 305 | 0.1707 | 90 |
| 303 | 0.1200 | 64 |
| 315 | 0.1013 | 26 |
| 312 | 0.0743 | 2 |
Top tissues by expression
236 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| right uterine tube | UBERON:0001302 | 89.66 | gold quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 80.89 | gold quality |
| pancreatic ductal cell | CL:0002079 | 79.33 | silver quality |
| bronchial epithelial cell | CL:0002328 | 75.35 | gold quality |
| bronchus | UBERON:0002185 | 74.05 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 73.62 | gold quality |
| cerebellar cortex | UBERON:0002129 | 73.60 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 73.59 | gold quality |
| skin of leg | UBERON:0001511 | 73.32 | gold quality |
| skin of abdomen | UBERON:0001416 | 73.17 | gold quality |
| cerebellum | UBERON:0002037 | 71.71 | gold quality |
| zone of skin | UBERON:0000014 | 71.10 | gold quality |
| esophagus mucosa | UBERON:0002469 | 70.55 | gold quality |
| lower esophagus mucosa | UBERON:0035834 | 70.27 | gold quality |
| tendon of biceps brachii | UBERON:0008188 | 70.15 | gold quality |
| buccal mucosa cell | CL:0002336 | 69.46 | gold quality |
| myocardium | UBERON:0002349 | 69.21 | gold quality |
| minor salivary gland | UBERON:0001830 | 68.21 | gold quality |
| secondary oocyte | CL:0000655 | 67.83 | gold quality |
| mouth mucosa | UBERON:0003729 | 66.67 | gold quality |
| saliva-secreting gland | UBERON:0001044 | 66.63 | gold quality |
| bone marrow cell | CL:0002092 | 66.32 | silver quality |
| upper arm skin | UBERON:0004263 | 65.21 | gold quality |
| cardiac muscle of right atrium | UBERON:0003379 | 64.96 | gold quality |
| left ventricle myocardium | UBERON:0006566 | 64.44 | gold quality |
| fallopian tube | UBERON:0003889 | 64.12 | gold quality |
| vagina | UBERON:0000996 | 63.95 | gold quality |
| nasal cavity mucosa | UBERON:0001826 | 63.43 | gold quality |
| nasal cavity epithelium | UBERON:0005384 | 63.40 | gold quality |
| prostate gland | UBERON:0002367 | 62.49 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 7.12 |
| E-CURD-10 | no | 15.60 |
Regulation
Is transcription factor: yes
Downstream targets (CollecTRI)
133 targets.
| Target | Regulation |
|---|---|
| ABCB1 | Unknown |
| ADA | Activation |
| ADAM2 | |
| AFP | |
| ALB | |
| AP1 | Unknown |
| APOD | |
| APP | |
| AQP1 | |
| AQP3 | Unknown |
| ATG5 | |
| AVP | |
| BAG1 | |
| BAK1 | |
| BAX | Unknown |
| BBC3 | Activation |
| BCL2 | |
| BDKRB2 | |
| BID | Activation |
| BIK | |
| BIRC5 | Unknown |
| CABLES1 | Unknown |
| CADM1 | |
| CASP1 | Activation |
| CASP2 | |
| CASP3 | Activation |
| CASP8AP2 | |
| CCNB1 | Repression |
| CCND1 | Repression |
| CCND3 |
JASPAR motifs
| Motif | Name | Family |
|---|---|---|
| MA0861.1 | TP73 | p53-related factors |
| MA0861.2 | TP73 | p53-related factors |
JASPAR matrix evidence (PMIDs): PMID:23243311
Upstream regulators (CollecTRI, top): BHLHE40, CEBPZ, E2F1, E2F3, E2F4, EGR1, EP300, HBP1, HMGB2, IRF1, JUN, KAT2B, KAT5, MYC, MYCN, MYF6, MYOD1, NKX3-1, SIRT1, SP1, STAT1, TBXT, TFAP2A, TP53, TP63, TP73, YY1, ZEB1
miRNA regulators (miRDB)
89 targeting TP73, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4533 | 100.00 | 69.48 | 2758 |
| HSA-MIR-6876-5P | 100.00 | 67.68 | 2126 |
| HSA-MIR-6870-5P | 99.99 | 68.55 | 2115 |
| HSA-MIR-4534 | 99.99 | 66.58 | 1907 |
| HSA-MIR-4723-5P | 99.97 | 68.70 | 2034 |
| HSA-MIR-5698 | 99.97 | 68.49 | 2029 |
| HSA-MIR-7111-5P | 99.97 | 68.48 | 2062 |
| HSA-MIR-4487 | 99.96 | 64.58 | 1252 |
| HSA-MIR-545-3P | 99.95 | 70.74 | 2783 |
| HSA-MIR-106A-5P | 99.90 | 73.94 | 2683 |
| HSA-MIR-6783-3P | 99.89 | 67.92 | 2059 |
| HSA-MIR-1343-3P | 99.89 | 66.78 | 1815 |
| HSA-MIR-4731-5P | 99.89 | 67.23 | 2537 |
| HSA-MIR-17-5P | 99.89 | 73.83 | 2665 |
| HSA-MIR-106B-5P | 99.88 | 74.72 | 2795 |
| HSA-MIR-20A-5P | 99.88 | 74.76 | 2769 |
| HSA-MIR-20B-5P | 99.88 | 74.01 | 2621 |
| HSA-MIR-519D-3P | 99.88 | 73.97 | 2607 |
| HSA-MIR-526B-3P | 99.88 | 74.06 | 2587 |
| HSA-MIR-93-5P | 99.88 | 73.98 | 2606 |
| HSA-MIR-323A-3P | 99.79 | 70.30 | 1739 |
| HSA-MIR-4422 | 99.72 | 72.07 | 2908 |
| HSA-MIR-1825 | 99.72 | 68.11 | 1089 |
| HSA-MIR-4530 | 99.69 | 66.47 | 1509 |
| HSA-MIR-670-5P | 99.67 | 69.94 | 1565 |
| HSA-MIR-6762-3P | 99.66 | 66.94 | 1188 |
| HSA-MIR-5197-5P | 99.64 | 69.08 | 1494 |
| HSA-MIR-1827 | 99.63 | 68.57 | 3265 |
| HSA-MIR-6134 | 99.63 | 65.68 | 1537 |
| HSA-MIR-4649-3P | 99.56 | 66.90 | 1783 |
Functional genomics
ClinGen dosage: haploinsufficiency 0 (no evidence), triplosensitivity 0 (no evidence). ClinGen Gene Dosage Map
Literature-anchored findings (GeneRIF, showing 40)
- expression of p73 in colorectal carcinoma (PMID:11675903)
- Frequent allelic losses on the short arm of chromosome 1 and decreased expression of the p73 gene at 1p36.3 in squamous cell carcinoma of the oral cavity (PMID:11788901)
- DNA damage-induced acetylation potentiates the apoptotic function of p73 by enhancing the ability of p73 to selectively activate the transcription of proapoptotic target genes (PMID:11804596)
- data establish a relationship between p73 gene expression and neuroblastic tumor differentiation and point out a role for the p73 gene in sympathetic neuronal differentiation (PMID:11839584)
- regulated by c-Abl through p38 MAP kinase pathway (PMID:11840343)
- interaction with c-myc and MM1 (PMID:11844794)
- Transactivation-deficient Delta TA-p73 inhibits p53 by direct competition for DNA binding: implications for tumorigenesis. (PMID:11844800)
- data seem to indicate that DeltaNp73 is a crucial gene in neuroblastoma pathogenesis (PMID:11859407)
- overexpression in malignant and premalignant lesions suggests role in oncogenic process in cervical epithelium (PMID:11870517)
- Induction of p57(KIP2) expression by p73beta (PMID:11891335)
- Autoinhibitory regulation of p73 by Delta Np73 to modulate cell survival and death through a p73-specific target element within the Delta Np73 promoter. (PMID:11909952)
- loss of reduced TP73 transcript expression through promoter hypermethylation may contribute to the tumorigenesis of oligodendroglial tumors (PMID:11920588)
- Identification and characterization of HIPK2 interacting with this protein and modulating functions of the p53 family in vivo (PMID:11925430)
- p63 and p73 expression may represent an early event in head and neck squamous carcinoma tumorigenesis and may function as oncogenes in the development of these tumors. (PMID:11957139)
- p73 expression is primarily mediated through binding of E2F1 (PMID:11988839)
- upregulation by ascorbic acid (PMID:12023887)
- DN-p73 is activated after DNA damage in a p53-dependent manner to regulate p53-induced cell cycle arrest. (PMID:12032848)
- HCMV-mediated inhibition of apoptosis only occurs in p73-expressing cells (PMID:12034725)
- data suggest that p73 stimulates the transcription of the YB-1 promoter by enhancing recruitment of the c-Myc-Max complex to the E-box (PMID:12080043)
- Mouse DDA3 gene is a direct transcriptional target of p73 in transfection assays (PMID:12082536)
- Overexpression of p73beta led to the apoptosis of Hela cells and enhancement of naphthoquinone analog induced cell death. (PMID:12095638)
- is regulated by protein kinase C delta (PMID:12097319)
- p73 gene inactivation might play an important role in the pathogenesis of acute lymphoblastic leukemia . The main mechanism of the loss expression would be the hypermethylation of p73 gene. (PMID:12133444)
- role in expression of DAN during cisplatin-induced cell death and osteoblast differentiation (PMID:12150978)
- identification of direct target genes combining DNA microarray and chromatin immunoprecipitation analyses (PMID:12213815)
- deletion or methylation of p73 is associated with B cell non-Hodgkin’s lymphomas (PMID:12353228)
- Overexpression of p73 in vascular smooth muscle cells results in decreased cell cycle transit accompanied by apoptosis. (PMID:12388104)
- p73 has roles as a specific dominant negative transcriptional repressor of the cell cycle inhibitor gene p21 blocking p53-mediated apoptosis (PMID:12427762)
- No associations of p73 G4C14-to-A4T14 at exon 2 and p53 Arg72Pro polymorphisms with the risk of digestive tract cancers in Japanese. (PMID:12430182)
- p53 DNA-binding domain plays a role in p73 interaction. (PMID:12519788)
- This protein and p53 interact with CTF2 and regulate HMG1 gene expression. (PMID:12534345)
- p73 isoforms affect the retinoblastoma protein (RB) tumor suppressor pathway independent of p53 (PMID:12584188)
- p73 has a role in apoptosis that requires PMS2 protein (PMID:12601175)
- transcriptional activation function of p73 is specifically targeted by E1A through a mechanism involving p300/CBP proteins during the process of transformation and that p73 may have a role to play as a tumor suppressor (PMID:12639967)
- modulation of level by cyclin G via a negative feedback reglation (PMID:12642871)
- p73 is phosphorylated in a cell cycle-dependent manner and negatively regulated by cyclin-dependent kinases (PMID:12676926)
- p53 and p73alpha have roles in cell migration (PMID:12750388)
- TP73 is an important E2F1 apoptotic target gene in DNA damage response. Acetylation is required for E2F1 recruitment on the P1p73 promoter and for its transcriptional activation. (PMID:12766778)
- Adenovirus-mediated p73 overexpression results in a strong induction of apoptosis in pancreatic adenocarcinoma. (PMID:12782576)
- Analysis of gene expression level profiles showed that parental cell line undergoes apoptosis through an E2F1/p73-dependent pathway while its drug resistant variant evades it. (PMID:12789260)
Cross-species orthologs
4 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | tp73 | ENSDARG00000017953 |
| mus_musculus | Trp73 | ENSMUSG00000029026 |
| rattus_norvegicus | Tp73 | ENSRNOG00000024707 |
| drosophila_melanogaster | p53 | FBGN0039044 |
Paralogs (2): TP63 (ENSG00000073282), TP53 (ENSG00000141510)
Protein
Protein identifiers
Tumor protein p73 — O15350 (reviewed: O15350)
Alternative names: p53-like transcription factor, p53-related protein
All UniProt accessions (2): O15350, A0A0C4DFW9
UniProt curated annotations — full annotation on UniProt →
Function. Participates in the apoptotic response to DNA damage. Isoforms containing the transactivation domain are pro-apoptotic, isoforms lacking the domain are anti-apoptotic and block the function of p53 and transactivating p73 isoforms. May be a tumor suppressor protein. Is an activator of FOXJ1 expression. It is an essential factor for the positive regulation of lung ciliated cell differentiation.
Subunit / interactions. Found in a complex with p53/TP53 and CABLES1. The C-terminal oligomerization domain binds to the ABL1 tyrosine kinase SH3 domain. Interacts with HECW2. Isoform Beta interacts homotypically and with p53/TP53, whereas isoform Alpha does not. Isoform Gamma interacts homotypically and with all p73 isoforms. Isoform Delta interacts with isoform Gamma, isoform Alpha, and homotypically. Isoforms Alpha and Beta interact with HIPK2. Isoform Alpha interacts with RANBP9. Isoform Beta interacts with WWOX. Interacts (via SAM domain) with FBXO45 (via B30.2/SPRY domain). Interacts with YAP1 (phosphorylated form). Interacts with HCK (via SH3 domain); this inhibits TP73 activity and degradation. Interacts (via SAM domain) with NQO1; this interaction is NADH-dependent, stabilizes TP73 in response to oxidative stress and protects it from ubiquitin-independent degradation by the 20S proteasome. (Microbial infection) Interacts with Epstein-Barr virus protein EBNA6; this interaction inhibits TP73-mediated apoptotic pathway.
Subcellular location. Nucleus. Cytoplasm.
Tissue specificity. Expressed in striatal neurons of patients with Huntington disease (at protein level). Brain, kidney, placenta, colon, heart, liver, spleen, skeletal muscle, prostate, thymus and pancreas. Highly expressed in fetal tissue. Expressed in the respiratory epithelium.
Post-translational modifications. Isoform alpha (but not isoform beta) is sumoylated on Lys-627, which potentiates proteasomal degradation but does not affect transcriptional activity. Phosphorylation by PLK1 and PLK3 inhibits the transcription regulator activity and pro-apoptotic function. Higher levels of phosphorylation seen in the brain from patients with Huntington disease. Polyubiquitinated by RCHY1/PIRH2; leading to its degradation by the proteasome.
Disease relevance. Ciliary dyskinesia, primary, 47, and lissencephaly (CILD47) [MIM:619466] A form of primary ciliary dyskinesia, a disorder characterized by abnormalities of motile cilia. Respiratory infections leading to chronic inflammation and bronchiectasis are recurrent, due to defects in the respiratory cilia. CILD47 is an autosomal recessive form characterized by onset soon after birth or in early childhood. Affected individuals also have neurologic features, such as impaired intellectual development and central hypotonia, associated with structural brain abnormalities, most notably lissencephaly and thin or absent corpus callosum. No situs abnormalities have been observed. The disease is caused by variants affecting the gene represented in this entry.
Cofactor. Binds 1 zinc ion per subunit.
Domain organisation. Possesses an acidic transactivation domain, a central DNA binding domain and a C-terminal oligomerization domain that binds to the ABL1 tyrosine kinase SH3 domain. The PPxY motif mediates interaction with WWOX.
Induction. Not induced by DNA damage. Isoforms lacking the transactivation domain block gene induction.
Miscellaneous. Maps to a chromosome region frequently mutated in diverse cell lines of human cancer. Appears not to be frequently mutated in human cancers, in contrast to p53/TP53. Hemizygosity is observed in neuroblastoma and oligodendroglioma. Activated and stabilized by interaction with RANBP9. Produced by alternative splicing of isoform Alpha. Produced by alternative splicing of isoform Alpha. The splicing of exon 11 results in a frameshift from the original reading frame. Produced by alternative splicing of isoform Alpha. Produced by alternative splicing of isoform Alpha. The splicing of exon 11 results in a frameshift from the original reading frame. The splicing of exon 13 reverts the reading frame to the sequence of isoform Alpha. Produced by alternative splicing of isoform Alpha. Produced by alternative promoter usage. Produced by alternative splicing of isoform dN-Alpha. Produced by alternative splicing of isoform dN-Alpha.
Similarity. Belongs to the p53 family.
Isoforms (12)
| UniProt ID | Names | Canonical? |
|---|---|---|
| O15350-1 | Alpha | yes |
| O15350-2 | Beta | |
| O15350-3 | Gamma | |
| O15350-4 | Delta | |
| O15350-5 | Epsilon | |
| O15350-6 | Zeta | |
| O15350-8 | dN-Alpha | |
| O15350-9 | dN-Beta | |
| O15350-10 | dN-Gamma | |
| O15350-11 | 10 | |
| O15350-12 | 11 | |
| O15350-13 | 12 |
RefSeq proteins (13): NP_001119712, NP_001119713, NP_001119714, NP_001191113, NP_001191114, NP_001191115, NP_001191116, NP_001191117, NP_001191118, NP_001191119, NP_001191120, NP_001191121, NP_005418* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR001660 | SAM | Domain |
| IPR002117 | p53_tumour_suppressor | Family |
| IPR008967 | p53-like_TF_DNA-bd_sf | Homologous_superfamily |
| IPR010991 | p53_tetrameristn | Domain |
| IPR011615 | p53_DNA-bd | Domain |
| IPR012346 | p53/RUNT-type_TF_DNA-bd_sf | Homologous_superfamily |
| IPR013761 | SAM/pointed_sf | Homologous_superfamily |
| IPR036674 | p53_tetramer_sf | Homologous_superfamily |
| IPR037612 | Tumour-p73_SAM | Domain |
| IPR057064 | P53_central_site | Conserved_site |
Pfam: PF00870, PF07647, PF07710
UniProt features (71 total): strand 14, helix 13, splice variant 12, turn 7, region of interest 6, binding site 4, mutagenesis site 4, modified residue 3, cross-link 2, sequence variant 2, chain 1, domain 1, short sequence motif 1, compositionally biased region 1
Structure
Experimental structures (PDB)
28 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 5HOB | X-RAY DIFFRACTION | 1.22 |
| 5HOC | X-RAY DIFFRACTION | 1.36 |
| 2WQI | X-RAY DIFFRACTION | 1.7 |
| 8P9C | X-RAY DIFFRACTION | 1.76 |
| 9GNB | X-RAY DIFFRACTION | 1.8 |
| 2XWC | X-RAY DIFFRACTION | 1.82 |
| 2WQJ | X-RAY DIFFRACTION | 2 |
| 9GLQ | X-RAY DIFFRACTION | 2.1 |
| 8P9E | X-RAY DIFFRACTION | 2.25 |
| 4A63 | X-RAY DIFFRACTION | 2.27 |
| 2WTT | X-RAY DIFFRACTION | 2.3 |
| 1DXS | X-RAY DIFFRACTION | 2.54 |
| 8P9D | X-RAY DIFFRACTION | 2.7 |
| 5KBD | X-RAY DIFFRACTION | 2.8 |
| 7EZJ | X-RAY DIFFRACTION | 2.9 |
| 3VD0 | X-RAY DIFFRACTION | 2.95 |
| 3VD1 | X-RAY DIFFRACTION | 2.95 |
| 4G82 | X-RAY DIFFRACTION | 3.1 |
| 4GUO | X-RAY DIFFRACTION | 3.19 |
| 4GUQ | X-RAY DIFFRACTION | 3.7 |
| 3VD2 | X-RAY DIFFRACTION | 4 |
| 4G83 | X-RAY DIFFRACTION | 4 |
| 1COK | SOLUTION NMR | |
| 2KBY | SOLUTION NMR | |
| 2MPS | SOLUTION NMR | |
| 2NB1 | SOLUTION NMR | |
| 6FGS | SOLUTION NMR | |
| 6IJQ | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-O15350-F1 | 66.25 | 0.36 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (4): 194; 197; 258; 262
Post-translational modifications (5): 27, 28, 99, 627, 627
Mutagenesis-validated functional residues (4):
| Position | Phenotype |
|---|---|
| 27 | impaired phosphorylation. |
| 99 | impaired phosphorylation of isoform beta by abl1. |
| 487 | loss of interaction with wwox. |
| 627 | strongly diminishes sumoylation but does not affect transcriptional activity. |
Function
Pathways and Gene Ontology
Reactome pathways
7 pathways
| ID | Pathway |
|---|---|
| R-HSA-139915 | Activation of PUMA and translocation to mitochondria |
| R-HSA-6803204 | TP53 Regulates Transcription of Genes Involved in Cytochrome C Release |
| R-HSA-6803205 | TP53 regulates transcription of several additional cell death genes whose specific roles in p53-dependent apoptosis remain uncertain |
| R-HSA-6803207 | TP53 Regulates Transcription of Caspase Activators and Caspases |
| R-HSA-6803211 | TP53 Regulates Transcription of Death Receptors and Ligands |
| R-HSA-6804759 | Regulation of TP53 Activity through Association with Co-factors |
| R-HSA-8939236 | RUNX1 regulates transcription of genes involved in differentiation of HSCs |
MSigDB gene sets: 228 (showing top):
GSE37336_LY6C_POS_VS_NEG_NAIVE_CD4_TCELL_DN, GSE45365_CTRL_VS_MCMV_INFECTION_NK_CELL_UP, GOBP_POSITIVE_REGULATION_OF_EPITHELIAL_CELL_DIFFERENTIATION, GOBP_EPITHELIUM_DEVELOPMENT, GOBP_INTRINSIC_APOPTOTIC_SIGNALING_PATHWAY_IN_RESPONSE_TO_DNA_DAMAGE_BY_P53_CLASS_MEDIATOR, WANG_CLIM2_TARGETS_UP, GOBP_LUNG_EPITHELIUM_DEVELOPMENT, GOBP_MUSCLE_TISSUE_DEVELOPMENT, BENPORATH_ES_WITH_H3K27ME3, BIOCARTA_ATM_PATHWAY, GOBP_REGULATION_OF_DEVELOPMENTAL_GROWTH, GOBP_LUNG_CELL_DIFFERENTIATION, GOBP_GROWTH, GAUSSMANN_MLL_AF4_FUSION_TARGETS_C_UP, SCHLESINGER_METHYLATED_DE_NOVO_IN_CANCER
GO Biological Process (36): kidney development (GO:0001822), release of cytochrome c from mitochondria (GO:0001836), mismatch repair (GO:0006298), inflammatory response (GO:0006954), DNA damage response (GO:0006974), regulation of mitotic cell cycle (GO:0007346), negative regulation of cell population proliferation (GO:0008285), intrinsic apoptotic signaling pathway in response to DNA damage (GO:0008630), response to xenobiotic stimulus (GO:0009410), post-embryonic development (GO:0009791), regulation of gene expression (GO:0010468), hippocampus development (GO:0021766), cerebrospinal fluid secretion (GO:0033326), intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (GO:0042771), regulation of apoptotic process (GO:0042981), positive regulation of MAPK cascade (GO:0043410), negative regulation of neuron apoptotic process (GO:0043524), negative regulation of neuron differentiation (GO:0045665), positive regulation of cell size (GO:0045793), positive regulation of DNA-templated transcription (GO:0045893), positive regulation of transcription by RNA polymerase II (GO:0045944), digestive tract morphogenesis (GO:0048546), neuron development (GO:0048666), positive regulation of oligodendrocyte differentiation (GO:0048714), protein tetramerization (GO:0051262), regulation of cell cycle (GO:0051726), negative regulation of cardiac muscle cell proliferation (GO:0060044), positive regulation of lung ciliated cell differentiation (GO:1901248), positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator (GO:1902167), regulation of DNA-templated transcription (GO:0006355), apoptotic process (GO:0006915), forebrain development (GO:0030900), positive regulation of apoptotic process (GO:0043065), regulation of neuron apoptotic process (GO:0043523), positive regulation of cell differentiation (GO:0045597), positive regulation of apoptotic signaling pathway (GO:2001235)
GO Molecular Function (17): transcription cis-regulatory region binding (GO:0000976), RNA polymerase II cis-regulatory region sequence-specific DNA binding (GO:0000978), DNA-binding transcription factor activity, RNA polymerase II-specific (GO:0000981), transcription corepressor binding (GO:0001222), DNA-binding transcription activator activity, RNA polymerase II-specific (GO:0001228), p53 binding (GO:0002039), DNA-binding transcription factor activity (GO:0003700), protein kinase binding (GO:0019901), identical protein binding (GO:0042802), metal ion binding (GO:0046872), RNA polymerase II-specific DNA-binding transcription factor binding (GO:0061629), MDM2/MDM4 family protein binding (GO:0097371), DNA-binding transcription factor binding (GO:0140297), promoter-specific chromatin binding (GO:1990841), DNA binding (GO:0003677), protein binding (GO:0005515), sequence-specific DNA binding (GO:0043565)
GO Cellular Component (10): chromatin (GO:0000785), nucleus (GO:0005634), nucleoplasm (GO:0005654), Golgi apparatus (GO:0005794), centrosome (GO:0005813), cytosol (GO:0005829), plasma membrane (GO:0005886), cell junction (GO:0030054), ciliary basal body (GO:0036064), cytoplasm (GO:0005737)
Reactome top-level categories
Rollup of top-4 pathways:
| Category | Pathways |
|---|---|
| TP53 Regulates Transcription of Cell Death Genes | 4 |
| Activation of BH3-only proteins | 1 |
| Regulation of TP53 Activity | 1 |
| Transcriptional regulation by RUNX1 | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 5 |
| RNA polymerase II transcription regulatory region sequence-specific DNA binding | 3 |
| protein binding | 3 |
| regulation of DNA-templated transcription | 2 |
| intracellular membrane-bounded organelle | 2 |
| cytoplasm | 2 |
| microtubule organizing center | 2 |
| animal organ development | 1 |
| renal system development | 1 |
| apoptotic mitochondrial changes | 1 |
| apoptotic signaling pathway | 1 |
| DNA repair | 1 |
| defense response | 1 |
| cellular response to stress | 1 |
| mitotic cell cycle | 1 |
| regulation of cell cycle | 1 |
| cell population proliferation | 1 |
| regulation of cell population proliferation | 1 |
| negative regulation of cellular process | 1 |
| DNA damage response | 1 |
| intrinsic apoptotic signaling pathway | 1 |
| response to chemical | 1 |
| multicellular organism development | 1 |
| multicellular organismal process | 1 |
| gene expression | 1 |
| regulation of macromolecule biosynthetic process | 1 |
| pallium development | 1 |
| limbic system development | 1 |
| anatomical structure development | 1 |
| body fluid secretion | 1 |
| secretion by tissue | 1 |
| intrinsic apoptotic signaling pathway in response to DNA damage | 1 |
| intrinsic apoptotic signaling pathway by p53 class mediator | 1 |
| apoptotic process | 1 |
| regulation of programmed cell death | 1 |
| MAPK cascade | 1 |
| regulation of MAPK cascade | 1 |
| positive regulation of intracellular signal transduction | 1 |
| negative regulation of apoptotic process | 1 |
| regulation of neuron apoptotic process | 1 |
Protein interactions and networks
STRING
1689 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| TP73 | MDM2 | Q00987 | 868 |
| TP73 | YAP1 | P46937 | 843 |
| TP73 | TP63 | Q9H3D4 | 779 |
| TP73 | RASSF1 | Q9NS23 | 700 |
| TP73 | CDKN2A | P42771 | 694 |
| TP73 | RBM38 | Q9H0Z9 | 669 |
| TP73 | MDM4 | O15151 | 613 |
| TP73 | CDKN1A | P38936 | 606 |
| TP73 | ABL1 | P00519 | 595 |
| TP73 | PMS2 | P54278 | 588 |
| TP73 | CASP3 | P42574 | 556 |
| TP73 | EP300 | Q09472 | 553 |
| TP73 | PIK3CA | P42336 | 552 |
| TP73 | GAPDH | P00354 | 549 |
| TP73 | CCND1 | P24385 | 538 |
IntAct
120 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| TP73 | TP73 | psi-mi:“MI:0407”(direct interaction) | 0.820 |
| TP73 | TP73 | psi-mi:“MI:0915”(physical association) | 0.820 |
| TP63 | TP73 | psi-mi:“MI:0407”(direct interaction) | 0.770 |
| TP63 | TP73 | psi-mi:“MI:0915”(physical association) | 0.770 |
| TP63 | TP73 | psi-mi:“MI:0914”(association) | 0.770 |
| ITCH | TP73 | psi-mi:“MI:0914”(association) | 0.750 |
| TP73 | ITCH | psi-mi:“MI:0407”(direct interaction) | 0.750 |
| ITCH | TP73 | psi-mi:“MI:0407”(direct interaction) | 0.750 |
| ITCH | TP73 | psi-mi:“MI:0915”(physical association) | 0.750 |
| YAP1 | TP73 | psi-mi:“MI:0407”(direct interaction) | 0.730 |
| TP73 | YAP1 | psi-mi:“MI:0407”(direct interaction) | 0.730 |
| TP73 | EP300 | psi-mi:“MI:0407”(direct interaction) | 0.650 |
| EP300 | TP73 | psi-mi:“MI:0192”(acetylation reaction) | 0.650 |
| WWOX | TP73 | psi-mi:“MI:0914”(association) | 0.640 |
| WWOX | TP73 | psi-mi:“MI:0915”(physical association) | 0.640 |
| HSPA9 | TP73 | psi-mi:“MI:0915”(physical association) | 0.640 |
BioGRID (511): TP73 (Affinity Capture-Western), YAP1 (Affinity Capture-Western), TP73 (Affinity Capture-MS), PLAGL1 (Affinity Capture-Western), PLAGL1 (Reconstituted Complex), TP73 (Reconstituted Complex), KAT2B (Affinity Capture-Western), EP300 (Affinity Capture-Western), PLAGL1 (Co-localization), TP73 (Co-localization), tat (Affinity Capture-Western), TP73 (Affinity Capture-Western), TP73 (Reconstituted Complex), CCNT1 (Affinity Capture-Western), TP73 (Affinity Capture-Western)
ESM2 similar proteins: A9LNK9, B2D6P4, E9Q7E2, G4N3L5, G5ED29, O15350, O45211, O61707, O95104, P14003, P15330, P20227, P23645, P29303, P34545, P47238, P49880, P53361, P98149, Q02926, Q0DA50, Q1LZF1, Q21955, Q22366, Q22703, Q29A33, Q3L1C9, Q4V3C1, Q61L47, Q68CP9, Q6C7K8, Q6E2N3, Q6YGZ4, Q7TSH6, Q7ZX03, Q8QGQ6, Q8SWR8, Q91YA8, Q91YB0, Q91YB2
Diamond homologs: O09185, O12946, O15350, O36006, O57538, O88898, O93379, P02340, P04637, P07193, P10360, P10361, P13481, P25035, P41685, P51664, P56423, P56424, P61260, P67938, P67939, P79734, P79820, P79892, Q00366, Q29480, Q29537, Q64662, Q8SPZ3, Q92143, Q95330, Q9H3D4, Q9JJP2, Q9JJP6, Q9TTA1, Q9TUB2, Q9W678, Q9W679, Q9WUR6, Q9XSK8
SIGNOR signaling
34 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| CHEK1 | up-regulates | TP73 | phosphorylation |
| YAP1 | up-regulates | TP73 | binding |
| PLK1 | down-regulates | TP73 | phosphorylation |
| RPL11 | up-regulates | TP73 | binding |
| RPL5 | up-regulates | TP73 | binding |
| CyclinE/CDK2 | down-regulates | TP73 | phosphorylation |
| CyclinB/CDK1 | down-regulates | TP73 | phosphorylation |
| TP73 | “up-regulates quantity by expression” | BBC3 | “transcriptional regulation” |
| TP73 | “up-regulates quantity by expression” | CDKN1A | “transcriptional regulation” |
| TP73 | “up-regulates quantity by expression” | PMAIP1 | “transcriptional regulation” |
| MDM2 | “down-regulates activity” | TP73 | binding |
| Nutlin-3 | up-regulates | TP73 | |
| TP73 | up-regulates | Apoptosis | |
| TP73 | up-regulates | Cell_death | |
| ACOX1 | “down-regulates quantity by destabilization” | TP73 | binding |
| FBXO45 | “down-regulates quantity by destabilization” | TP73 | binding |
| “Cullin 1-RBX1-Skp1” | “down-regulates quantity by destabilization” | TP73 | polyubiquitination |
| WWP1 | “down-regulates quantity by destabilization” | TP73 | polyubiquitination |
| WWP2 | “down-regulates quantity by destabilization” | TP73 | polyubiquitination |
| PRKCB | “up-regulates activity” | TP73 | phosphorylation |
| PRKCA | “up-regulates activity” | TP73 | phosphorylation |
| YAP/TAZ | “up-regulates activity” | TP73 | binding |
| PLK2 | “down-regulates activity” | TP73 | phosphorylation |
| AURKA | “down-regulates activity” | TP73 | phosphorylation |
| ITCH | “down-regulates quantity by destabilization” | TP73 | ubiquitination |
| MAPK8 | “up-regulates activity” | TP73 | phosphorylation |
| PLK3 | “down-regulates activity” | TP73 | phosphorylation |
| CHUK | “up-regulates activity” | TP73 | phosphorylation |
| ABL1 | up-regulates | TP73 | phosphorylation |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 61 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Regulation of TP53 Activity | 6 | 18.1× | 6e-05 |
| Cell Cycle Checkpoints | 6 | 12.1× | 3e-04 |
| Class I MHC mediated antigen processing & presentation | 6 | 9.6× | 8e-04 |
| Transcriptional Regulation by TP53 | 6 | 8.5× | 1e-03 |
| Cell Cycle, Mitotic | 7 | 7.7× | 7e-04 |
| Cell Cycle | 9 | 7.4× | 1e-04 |
| Antigen processing: Ubiquitination & Proteasome degradation | 8 | 6.8× | 5e-04 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| protein-containing complex assembly | 5 | 10.7× | 4e-03 |
| protein ubiquitination | 11 | 8.6× | 3e-05 |
| proteasome-mediated ubiquitin-dependent protein catabolic process | 8 | 7.9× | 1e-03 |
| negative regulation of apoptotic process | 8 | 5.2× | 5e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
134 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 4 |
| Likely pathogenic | 1 |
| Uncertain significance | 87 |
| Likely benign | 17 |
| Benign | 13 |
Top pathogenic / likely-pathogenic (5)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1192319 | NM_005427.4(TP73):c.1196+1G>A | Pathogenic |
| 1192320 | NM_005427.4(TP73):c.994C>T (p.Gln332Ter) | Pathogenic |
| 1192321 | NM_005427.4(TP73):c.1459del (p.Tyr487fs) | Pathogenic |
| 1192322 | NM_005427.4(TP73):c.613G>T (p.Glu205Ter) | Pathogenic |
| 4076273 | NM_005427.4(TP73):c.453_454del (p.Tyr152fs) | Likely pathogenic |
SpliceAI
3057 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 1:3652639:CAGGT:C | donor_loss | 1.0000 |
| 1:3652641:GGTAG:G | donor_loss | 1.0000 |
| 1:3652642:GTA:G | donor_loss | 1.0000 |
| 1:3652643:T:G | donor_loss | 1.0000 |
| 1:3682332:GAGC:G | acceptor_gain | 1.0000 |
| 1:3682431:G:GG | donor_gain | 1.0000 |
| 1:3683052:T:A | acceptor_gain | 1.0000 |
| 1:3683058:A:AG | acceptor_gain | 1.0000 |
| 1:3683058:AG:A | acceptor_gain | 1.0000 |
| 1:3683058:AGG:A | acceptor_gain | 1.0000 |
| 1:3683059:G:A | acceptor_gain | 1.0000 |
| 1:3683059:G:GA | acceptor_gain | 1.0000 |
| 1:3683059:GGG:G | acceptor_gain | 1.0000 |
| 1:3683059:GGGA:G | acceptor_gain | 1.0000 |
| 1:3683059:GGGAA:G | acceptor_gain | 1.0000 |
| 1:3683177:CATGG:C | donor_loss | 1.0000 |
| 1:3683178:ATGG:A | donor_loss | 1.0000 |
| 1:3683179:TGG:T | donor_loss | 1.0000 |
| 1:3683182:T:A | donor_loss | 1.0000 |
| 1:3707541:C:CA | acceptor_gain | 1.0000 |
| 1:3707543:C:CA | acceptor_gain | 1.0000 |
| 1:3707544:GCCAG:G | acceptor_loss | 1.0000 |
| 1:3707547:A:AC | acceptor_loss | 1.0000 |
| 1:3707547:A:AG | acceptor_gain | 1.0000 |
| 1:3707548:G:GG | acceptor_gain | 1.0000 |
| 1:3707548:G:GT | acceptor_loss | 1.0000 |
| 1:3707548:GGC:G | acceptor_gain | 1.0000 |
| 1:3707548:GGCCC:G | acceptor_gain | 1.0000 |
| 1:3707791:GGTG:G | donor_loss | 1.0000 |
| 1:3707792:GT:G | donor_loss | 1.0000 |
AlphaMissense
4193 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 1:3707772:C:A | A137D | 1.000 |
| 1:3707774:A:C | K138Q | 1.000 |
| 1:3707774:A:G | K138E | 1.000 |
| 1:3707775:A:T | K138M | 1.000 |
| 1:3707776:G:C | K138N | 1.000 |
| 1:3707776:G:T | K138N | 1.000 |
| 1:3707777:T:C | S139P | 1.000 |
| 1:3707781:C:A | A140D | 1.000 |
| 1:3707786:T:A | W142R | 1.000 |
| 1:3707786:T:C | W142R | 1.000 |
| 1:3722024:T:C | S145P | 1.000 |
| 1:3722025:C:T | S145F | 1.000 |
| 1:3722039:A:G | K150E | 1.000 |
| 1:3722043:T:C | L151P | 1.000 |
| 1:3722045:T:G | Y152D | 1.000 |
| 1:3722048:T:C | C153R | 1.000 |
| 1:3722049:G:A | C153Y | 1.000 |
| 1:3722050:C:G | C153W | 1.000 |
| 1:3722066:T:C | C159R | 1.000 |
| 1:3722068:C:G | C159W | 1.000 |
| 1:3722121:C:A | A177D | 1.000 |
| 1:3722127:C:A | P179H | 1.000 |
| 1:3722132:T:G | Y181D | 1.000 |
| 1:3722168:C:A | R193S | 1.000 |
| 1:3722171:T:A | C194S | 1.000 |
| 1:3722171:T:C | C194R | 1.000 |
| 1:3722171:T:G | C194G | 1.000 |
| 1:3722172:G:A | C194Y | 1.000 |
| 1:3722172:G:C | C194S | 1.000 |
| 1:3722172:G:T | C194F | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000018595 (1:3708217 G>A,C), RS1000056189 (1:3673042 C>T), RS1000067675 (1:3655963 G>A), RS1000105494 (1:3703801 C>A,G), RS1000118289 (1:3736068 G>C), RS1000166688 (1:3679288 G>A), RS1000169032 (1:3670657 C>T), RS1000190268 (1:3673162 G>A), RS1000232500 (1:3736307 T>G), RS1000258436 (1:3699417 C>T), RS1000278107 (1:3706905 C>T), RS1000279599 (1:3725894 G>A,C,T), RS1000438823 (1:3702427 G>A), RS1000472343 (1:3716073 G>A,T), RS1000472658 (1:3690448 T>C)
Disease associations
OMIM: gene MIM:601990 | disease phenotypes: MIM:619466
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| ciliary dyskinesia, primary, 47, and lissencephaly | Strong | Autosomal recessive |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| ciliary dyskinesia, primary, 47, and lissencephaly | Strong | AR |
Mondo (2): ciliary dyskinesia, primary, 47, and lissencephaly (MONDO:0030346), respiratory failure (MONDO:0021113)
Orphanet (0):
HPO phenotypes
12 total (12 of 12 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000007 | Autosomal recessive inheritance |
| HP:0000389 | Chronic otitis media |
| HP:0001250 | Seizure |
| HP:0001274 | Agenesis of corpus callosum |
| HP:0001339 | Lissencephaly |
| HP:0002079 | Hypoplasia of the corpus callosum |
| HP:0002098 | Respiratory distress |
| HP:0002110 | Bronchiectasis |
| HP:0002205 | Recurrent respiratory infections |
| HP:0003623 | Neonatal onset |
| HP:0031602 | Abnormal mucociliary clearance |
| HP:0100750 | Atelectasis |
GWAS associations
6 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST001523_38 | Visceral adipose tissue adjusted for BMI | 6.000000e-06 |
| GCST001524_16 | Visceral adipose tissue/subcutaneous adipose tissue ratio | 2.000000e-06 |
| GCST001525_13 | Visceral fat | 2.000000e-06 |
| GCST001525_2 | Visceral fat | 2.000000e-06 |
| GCST008155_41 | Waist-hip ratio | 3.000000e-06 |
| GCST008992_6 | Joint damage in rheumatoid arthritis | 2.000000e-06 |
EFO canonical traits (4, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004340 | body mass index |
| EFO:0004767 | visceral:subcutaneous adipose tissue ratio |
| EFO:0004343 | waist-hip ratio |
| EFO:0005413 | joint damage measurement |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D012131 | Respiratory Insufficiency | C08.618.846 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
93 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Cisplatin | decreases expression, affects localization, increases phosphorylation, affects binding, increases activity (+7 more) | 11 |
| Arsenic Trioxide | increases cleavage, increases expression, affects cotreatment, increases activity, increases acetylation (+4 more) | 6 |
| Benzo(a)pyrene | increases expression, affects activity, affects methylation, affects cotreatment, decreases expression (+1 more) | 5 |
| sodium arsenite | affects expression, affects methylation, increases expression | 4 |
| bisphenol A | affects cotreatment, increases methylation, increases expression | 3 |
| Doxorubicin | affects binding, increases reaction, decreases reaction, affects cotreatment, increases expression (+2 more) | 3 |
| Quercetin | affects cotreatment, increases expression | 3 |
| Valproic Acid | increases methylation | 3 |
| kaempferol | increases expression | 2 |
| nickel chloride | decreases activity, affects binding, decreases reaction, increases phosphorylation | 2 |
| chrysin | increases expression | 2 |
| 2-(2-chloro-4-iodophenylamino)-N-cyclopropylmethoxy-3,4-difluorobenzamide | affects cotreatment, increases reaction, affects expression, decreases reaction, increases expression (+3 more) | 2 |
| bisphenol S | increases expression, decreases methylation | 2 |
| Resveratrol | increases expression, affects cotreatment, decreases expression | 2 |
| Etoposide | decreases reaction, increases activity, increases cleavage, affects reaction, increases expression (+1 more) | 2 |
| Fluorouracil | affects response to substance, increases expression, increases reaction | 2 |
| Zinc | decreases expression, affects activity, affects binding, affects folding | 2 |
| Sirolimus | affects cotreatment, increases expression, affects activity, decreases reaction, decreases expression (+3 more) | 2 |
| Luteolin | increases expression | 2 |
| cyclopiazonic acid | increases degradation | 1 |
| S63845 | increases reaction, affects reaction, affects cotreatment, increases expression | 1 |
| (1R,3S,3aR,8bS)-3a-(4-Bromophenyl)-6,8-dimethoxy-3-phenyl-2,3,3a,8b-tetrahydro-1H-cyclopenta(b)benzofuran-1,8b-diol | decreases expression | 1 |
| bufotalin | increases expression | 1 |
| ethylbenzene | decreases expression, increases methylation, affects cotreatment | 1 |
| lasiocarpine | increases expression | 1 |
| myristicin | decreases expression | 1 |
| naringenin | affects cotreatment, increases expression | 1 |
| benzo(b)fluoranthene | affects cotreatment, decreases expression | 1 |
| 4-biphenylamine | decreases expression | 1 |
| VX-agent | increases expression | 1 |
Cellosaurus cell lines
10 cell lines: 7 cancer cell line, 3 embryonic stem cell
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_A7P1 | SEES3-1V human TP73, clone1 | Embryonic stem cell | Male |
| CVCL_A7P2 | SEES3-1V human TP73, clone2 | Embryonic stem cell | Male |
| CVCL_A7P3 | SEES3-1V human TP73, clone3 | Embryonic stem cell | Male |
| CVCL_B8A1 | Abcam Raji TP73 KO | Cancer cell line | Male |
| CVCL_C0AV | Abcam THP-1 TP73 KO | Cancer cell line | Male |
| CVCL_C7CI | Abcam PC-3 TP73 KO | Cancer cell line | Male |
| CVCL_E942 | YSK-21 | Cancer cell line | Male |
| CVCL_TT49 | HAP1 TP73 (-) 1 | Cancer cell line | Male |
| CVCL_XU64 | HAP1 TP73 (-) 2 | Cancer cell line | Male |
| CVCL_XU65 | HAP1 TP73 (-) 3 | Cancer cell line | Male |
Clinical trials (associated diseases)
300 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00208078 | PHASE4 | TERMINATED | Effect of Non-Invasive Ventilation in Cystic Fibrosis Patient With Chronic Respiratory Failure. |
| NCT00291460 | PHASE4 | UNKNOWN | Inspiratory Muscle Training in Hypercapnic COPD |
| NCT00355732 | PHASE4 | COMPLETED | Chronic Obstructive Pulmonary Disease and Weaning From Mechanical Ventilation in Difficult to Wean Patients |
| NCT00560287 | PHASE4 | UNKNOWN | Non-Invasive Ventilation in Amyotrophic Lateral Sclerosis |
| NCT00600639 | PHASE4 | TERMINATED | Non-Invasive Mechanical Ventilation in Elderly Patients |
| NCT00698958 | PHASE4 | COMPLETED | Ambulatory Adaptation to Non-Invasive Mechanical Ventilation |
| NCT00708149 | PHASE4 | COMPLETED | Comparison of the Efficacy for Stress Ulcer Prophylaxis Between the Patients Received Lansoprazole OD and Control Group Weaning From Mechanical Ventilator in Respiratory Care Center: a Randomized Control Trial |
| NCT00732537 | PHASE4 | COMPLETED | Inhaled Nitric Oxide by Oxygen Hood in Neonates |
| NCT00925860 | PHASE4 | COMPLETED | Non-Positive Pressure Ventilation in Hypoxemic Patients |
| NCT01204281 | PHASE4 | COMPLETED | Proportional Assist Ventilation (PAV) in Early Stage of Critically Ill Patients |
| NCT01280019 | PHASE4 | UNKNOWN | FRC Guided Therapy in Acute Respiratory Failure |
| NCT01472302 | PHASE4 | COMPLETED | Closed Loop Ventilation Strategy in Intensive Care Unit (ICU) Patients |
| NCT01572337 | PHASE4 | COMPLETED | Early Non-invasive Ventilation Outside the Intensive Care Unit |
| NCT01941524 | PHASE4 | COMPLETED | Brain Oxygenation and Function of Preterm Newborns During Administration of Two Different Surfactant Preparations |
| NCT02203019 | PHASE4 | COMPLETED | Study of Sedative Medications in Patients With Severe Infection and Respiratory Failure |
| NCT02491346 | PHASE4 | UNKNOWN | A Trial Comparing SGC and Conventional Empiric Treatment for Glucose Control in Critically Ill Patients With Mechanical Ventilation in ICU |
| NCT02497729 | PHASE4 | COMPLETED | Checklists and Upright Positioning in Endotracheal Intubation of Critically Ill Patients (Check-UP) Trial |
| NCT02526862 | PHASE4 | COMPLETED | Prevention of Pressure Ulcers in Patients Under Non-Invasive Mechanical Ventilation |
| NCT02958150 | PHASE4 | UNKNOWN | Dexmedetomidine Versus Standard Clinical Practice During Non Invasive Mechanical Ventilation |
| NCT03026777 | PHASE4 | COMPLETED | Preventing Cardiovascular collaPse With Administration of Fluid Resuscitation Before Endotracheal Intubation |
| NCT03337373 | PHASE4 | COMPLETED | The Study of Pharmacokinetics and Pharmacodynamics of Cisatracurium |
| NCT03625687 | PHASE4 | TERMINATED | Pan-genotypic Direct Acting Antiviral Therapy in Donor HCV-positive to Recipient HCV-negative Lung Transplant |
| NCT03787732 | PHASE4 | COMPLETED | Preventing Cardiovascular Collapse With Administration of Fluid Resuscitation During Induction and Intubation |
| NCT03962725 | PHASE4 | TERMINATED | Avoiding Neuromuscular Blockers to Reduce Complications |
| NCT04092621 | PHASE4 | UNKNOWN | Rapid Atrial Fibrillation Treatment Strategy |
| NCT04350086 | PHASE4 | WITHDRAWN | Use of Dexmedetomidine in Light to Moderate Sedation in the Patient in the Palliative Situation of a Sars-cov-2 / COVID-19 Infection |
| NCT04496362 | PHASE4 | ACTIVE_NOT_RECRUITING | Veno-venous Extracorporeal Membrane Oxygenation (VV-ECMO) Heparin Study |
| NCT05277896 | PHASE4 | COMPLETED | Randomized Trial of Sedative Choice for Intubation |
| NCT05322447 | PHASE4 | COMPLETED | High-dose L-Carnitine and Diaphragmatic Function Assessed by Ultrasonography in Patients With Respiratory Failure. |
| NCT05843123 | PHASE4 | COMPLETED | Comparison of Gas Exchange Between Two Invasive Mechanical Ventilation Modes in Children |
| NCT06401083 | PHASE4 | RECRUITING | The Effect of an Additional Pre-extubational Loading Dose of Caffeine-citrate |
| NCT06881927 | PHASE4 | NOT_YET_RECRUITING | Eduction in ImmunoSuppressive Regimen Among Kidney Transplant Recipients Patients Admitted to the Intensive Care Unit for Septic Shock and/or Acute Respiratory Failure |
| NCT00000562 | PHASE3 | COMPLETED | Extracorporeal Support for Respiratory Insufficiency (ECMO) |
| NCT00148642 | PHASE3 | COMPLETED | Silver-Coated Endotracheal Tube to Reduce Ventilator Associated Pneumonia (VAP) |
| NCT00221520 | PHASE3 | UNKNOWN | Sedation in the Intensive Care Unit |
| NCT00230984 | PHASE3 | COMPLETED | IRAD2 : Patients With Respiratory Failure at Home |
| NCT00248443 | PHASE3 | COMPLETED | Réa-MiniMax: Severe Acute Respiratory Failure in Hematology and Cancer Patients Without Bronchoalveolar Lavage |
| NCT00347321 | PHASE3 | COMPLETED | Early Percutaneous Tracheostomy for Cardiac Surgery (ETOC) |
| NCT00549809 | PHASE3 | COMPLETED | Comparison Between IMV and SIMV/PS for Ventilatory Support of Children: a Randomized Clinical Trial |
| NCT01076816 | PHASE3 | TERMINATED | Dexmedetomidine Pharmacokinetics-pharmacodynamics in Mechanically Ventilated Children With Single-organ Respiratory Failure |
Related Atlas pages
- Associated diseases: ciliary dyskinesia, primary, 47, and lissencephaly
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): ciliary dyskinesia, primary, 47, and lissencephaly, respiratory failure