TRAM1L1-AS1

Summary

TRAM1L1-AS1 (TRAM1L1 antisense RNA 1, HGNC:58876) is a long non-coding RNA gene on chromosome 4q26.

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58876
Approved symbol	TRAM1L1-AS1
Name	TRAM1L1 antisense RNA 1
Location	4q26
Locus type	RNA, long non-coding
Status	Approved
Entrez	105377388

Gene structure

Transcript identifiers

Ensembl transcripts: 0

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

None — 0 exons

Expression profiles

Top tissues by expression

0 total, by Bgee expression score (0-100, higher = more expressed):

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Protein identifiers

Canonical reviewed UniProt: None (reviewed: )

All UniProt accessions (0):

RefSeq proteins (0): (*=MANE)

Domains & families (InterPro)

Structure

Experimental structures (PDB)

0 structures.

Predicted structure (AlphaFold)

Function

Pathways and Gene Ontology

Reactome pathways

0 pathways

MSigDB gene sets: 0 (showing top):

GO Biological Process (0):

GO Molecular Function (0):

GO Cellular Component (0):

Protein interactions and networks

STRING

0 interactions, top by confidence (×1000):

IntAct

0 interactions, top by confidence:

SIGNOR signaling

0 interactions.

Disease & clinical

Clinical variants and AI predictions

ClinVar

0 variants total. Per-class counts are floors (≥ shown; pagination cap):

Classification	Count (floor)
Pathogenic	0
Likely pathogenic	0
Uncertain significance	0
Likely benign	0
Benign	0

Top pathogenic / likely-pathogenic (0)

SpliceAI

0 predictions. Top by Δscore:

AlphaMissense

0 scored. Top likely-pathogenic:

dbSNP variants (sampled 300 via entrez): RS1000098578 (4:117079172 T>A,C), RS1000162539 (4:117101638 G>A), RS1000214552 (4:117101337 T>C), RS1000220755 (4:117104853 T>C), RS1000269450 (4:117096281 C>T), RS1000319973 (4:117081854 C>A,T), RS1000322713 (4:117101932 G>A), RS1000470659 (4:117099995 G>A), RS1000472812 (4:117085781 C>T), RS1000514467 (4:117090331 C>A,G,T), RS1000520669 (4:117099806 A>G), RS10005395 (4:117104573 T>A,G), RS1000571344 (4:117099597 CTT>C), RS1000665389 (4:117082212 C>T), RS1000710666 (4:117088544 A>ATGG)

Disease associations

OMIM: gene `` | disease phenotypes:

GenCC curated gene-disease

Mondo (0):

Orphanet (0):

HPO phenotypes

0 total (0 of 0 shown, HPO-id order):

GWAS associations

0 associations (top):

Drugs & pharmacology

Drug and pharmacology data

Is drug target: no

PharmGKB: 0 entries

Clinical trials (associated diseases)

0 trials via MONDO — disease-level, not drug-specific.