TRCR1

Summary

TRCR1 (TBC1D22A divergent RNA CLOCK regulator 1, HGNC:55388) is a long non-coding RNA gene on chromosome 22q13.31.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55388
Approved symbol	TRCR1
Name	TBC1D22A divergent RNA CLOCK regulator 1
Location	22q13.31
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000260708
Ensembl biotype	lncRNA
Entrez	119863861
RNAcentral	URS00026A1AA5 — lncRNA, 618 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000564152

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000564152 — 1 exons

Exon	Start	End
ENSE00004263969	46761879	46762613

Expression profiles

Bgee: expression breadth ubiquitous, 217 present calls, max score 93.94.

Top tissues by expression

246 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
tendon of biceps brachii	UBERON:0008188	93.94	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	89.40	gold quality
gastrocnemius	UBERON:0001388	88.39	gold quality
granulocyte	CL:0000094	88.31	gold quality
muscle of leg	UBERON:0001383	88.10	gold quality
adenohypophysis	UBERON:0002196	87.95	gold quality
tendon	UBERON:0000043	87.69	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.62	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	86.44	gold quality
pituitary gland	UBERON:0000007	86.08	gold quality
pancreatic ductal cell	CL:0002079	85.01	silver quality
C1 segment of cervical spinal cord	UBERON:0006469	84.41	gold quality
calcaneal tendon	UBERON:0003701	84.40	gold quality
hindlimb stylopod muscle	UBERON:0004252	83.92	gold quality
right hemisphere of cerebellum	UBERON:0014890	83.90	gold quality
left ovary	UBERON:0002119	83.86	gold quality
cerebellar hemisphere	UBERON:0002245	83.78	gold quality
cerebellar cortex	UBERON:0002129	83.62	gold quality
right lung	UBERON:0002167	83.17	gold quality
sural nerve	UBERON:0015488	83.08	gold quality
cerebellum	UBERON:0002037	82.74	gold quality
tibial artery	UBERON:0007610	82.70	gold quality
popliteal artery	UBERON:0002250	82.69	gold quality
tibialis anterior	UBERON:0001385	82.62	silver quality
spinal cord	UBERON:0002240	82.32	gold quality
skin of leg	UBERON:0001511	82.23	gold quality
endothelial cell	CL:0000115	82.07	silver quality
monocyte	CL:0000576	81.87	gold quality
leukocyte	CL:0000738	81.57	gold quality
right ovary	UBERON:0002118	81.42	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	6.82

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.