TRD-AS1

Summary

TRD-AS1 (TRD antisense RNA 1, HGNC:56197) is a long non-coding RNA gene on chromosome 14q11.2.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56197
Approved symbol	TRD-AS1
Name	TRD antisense RNA 1
Location	14q11.2
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000251002
Ensembl biotype	lncRNA
Entrez	105370401
RNAcentral	URS0000BC4625 — lncRNA, 2687 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 18 — 18 lncRNA

ENST00000514473, ENST00000535351, ENST00000537850, ENST00000541008, ENST00000545498, ENST00000545670, ENST00000556777, ENST00000653737, ENST00000655085, ENST00000655336, ENST00000656379, ENST00000668212, ENST00000684803, ENST00000687763, ENST00000690364, ENST00000690438, ENST00000690801, ENST00000692823

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000514473 — 3 exons

Exon	Start	End
ENSE00002023405	22481241	22481358
ENSE00002036791	22482853	22482959
ENSE00002055517	22380680	22382405

Expression profiles

Bgee: expression breadth ubiquitous, 130 present calls, max score 96.35.

Top tissues by expression

130 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
granulocyte	CL:0000094	96.35	gold quality
blood	UBERON:0000178	80.33	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	77.24	gold quality
lymph node	UBERON:0000029	76.53	gold quality
endometrium	UBERON:0001295	74.78	gold quality
spleen	UBERON:0002106	74.64	gold quality
tonsil	UBERON:0002372	74.45	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	74.44	gold quality
bone marrow	UBERON:0002371	74.26	gold quality
leukocyte	CL:0000738	73.62	gold quality
bone marrow cell	CL:0002092	73.22	silver quality
monocyte	CL:0000576	72.07	gold quality
colonic epithelium	UBERON:0000397	71.15	gold quality
ventricular zone	UBERON:0003053	70.28	gold quality
vermiform appendix	UBERON:0001154	67.65	gold quality
rectum	UBERON:0001052	67.59	gold quality
calcaneal tendon	UBERON:0003701	67.36	gold quality
gall bladder	UBERON:0002110	66.66	gold quality
omental fat pad	UBERON:0010414	66.23	gold quality
ganglionic eminence	UBERON:0004023	64.88	gold quality
adipose tissue	UBERON:0001013	64.65	gold quality
mucosa of transverse colon	UBERON:0004991	63.59	gold quality
subcutaneous adipose tissue	UBERON:0002190	63.41	gold quality
small intestine	UBERON:0002108	63.29	gold quality
sural nerve	UBERON:0015488	63.15	silver quality
small intestine Peyer’s patch	UBERON:0003454	63.06	gold quality
cortical plate	UBERON:0005343	62.81	gold quality
liver	UBERON:0002107	62.32	gold quality
mucosa of stomach	UBERON:0001199	62.15	gold quality
heart left ventricle	UBERON:0002084	61.94	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	14.43

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.