TRIM5
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Also known as RNF88TRIM5alpha
Summary
TRIM5 (tripartite motif containing 5, HGNC:16276) is a protein-coding gene on chromosome 11p15.4, encoding Tripartite motif-containing protein 5 (Q9C035). Capsid-specific restriction factor that prevents infection from non-host-adapted retroviruses.
The protein encoded by this gene is a member of the tripartite motif (TRIM) family. The TRIM motif includes three zinc-binding domains, a RING, a B-box type 1 and a B-box type 2, and a coiled-coil region. The protein forms homo-oligomers via the coilel-coil region and localizes to cytoplasmic bodies. It appears to function as a E3 ubiquitin-ligase and ubiqutinates itself to regulate its subcellular localization. It may play a role in retroviral restriction. Multiple alternatively spliced transcript variants encoding different isoforms have been described for this gene.
Source: NCBI Gene 85363 — RefSeq curated summary.
At a glance
- GWAS associations: 38
- Clinical variants (ClinVar): 122 total
- MANE Select transcript:
NM_033034
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:16276 |
| Approved symbol | TRIM5 |
| Name | tripartite motif containing 5 |
| Location | 11p15.4 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | RNF88, TRIM5alpha |
| Ensembl gene | ENSG00000132256 |
| Ensembl biotype | protein_coding |
| OMIM | 608487 |
| Entrez | 85363 |
Gene structure
Transcript identifiers
Ensembl transcripts: 16 — 10 protein_coding, 3 protein_coding_CDS_not_defined, 2 retained_intron, 1 nonsense_mediated_decay
ENST00000380027, ENST00000380034, ENST00000396847, ENST00000412903, ENST00000419850, ENST00000433961, ENST00000438025, ENST00000465634, ENST00000483835, ENST00000487241, ENST00000492086, ENST00000682968, ENST00000684417, ENST00000684655, ENST00000957480, ENST00000957481
RefSeq mRNA: 4 — MANE Select: NM_033034
NM_001410958, NM_033034, NM_033092, NM_033093
CCDS: CCDS31392, CCDS31393, CCDS31394, CCDS91425
Canonical transcript exons
ENST00000380034 — 8 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000903262 | 5679761 | 5680238 |
| ENSE00001342726 | 5684868 | 5685074 |
| ENSE00001811417 | 5663195 | 5665395 |
| ENSE00003496416 | 5678204 | 5678434 |
| ENSE00003499028 | 5667689 | 5667711 |
| ENSE00003595528 | 5665656 | 5665682 |
| ENSE00003613146 | 5665981 | 5666081 |
| ENSE00003643691 | 5679074 | 5679169 |
Expression profiles
Bgee: expression breadth ubiquitous, 235 present calls, max score 92.15.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 14.6154 / max 390.4914, expressed in 1764 samples.
FANTOM5 promoters (4 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 118383 | 13.0694 | 1759 |
| 118381 | 1.1310 | 472 |
| 118382 | 0.3267 | 118 |
| 118387 | 0.0884 | 32 |
Top tissues by expression
272 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| sural nerve | UBERON:0015488 | 92.15 | gold quality |
| germinal epithelium of ovary | UBERON:0001304 | 91.11 | gold quality |
| palpebral conjunctiva | UBERON:0001812 | 89.31 | gold quality |
| stromal cell of endometrium | CL:0002255 | 88.69 | gold quality |
| body of pancreas | UBERON:0001150 | 88.52 | gold quality |
| endometrium | UBERON:0001295 | 87.58 | gold quality |
| seminal vesicle | UBERON:0000998 | 87.51 | gold quality |
| monocyte | CL:0000576 | 86.93 | gold quality |
| descending thoracic aorta | UBERON:0002345 | 86.74 | gold quality |
| mononuclear cell | CL:0000842 | 86.59 | gold quality |
| visceral pleura | UBERON:0002401 | 86.57 | silver quality |
| blood vessel layer | UBERON:0004797 | 86.55 | gold quality |
| leukocyte | CL:0000738 | 86.48 | gold quality |
| blood | UBERON:0000178 | 86.16 | gold quality |
| pancreas | UBERON:0001264 | 86.16 | gold quality |
| thoracic aorta | UBERON:0001515 | 86.05 | gold quality |
| ascending aorta | UBERON:0001496 | 86.02 | gold quality |
| right adrenal gland cortex | UBERON:0035827 | 85.91 | gold quality |
| colonic epithelium | UBERON:0000397 | 85.68 | gold quality |
| right lobe of liver | UBERON:0001114 | 85.51 | gold quality |
| right adrenal gland | UBERON:0001233 | 85.30 | gold quality |
| mucosa of paranasal sinus | UBERON:0005030 | 85.28 | silver quality |
| ectocervix | UBERON:0012249 | 85.13 | gold quality |
| parietal pleura | UBERON:0002400 | 85.06 | silver quality |
| left adrenal gland | UBERON:0001234 | 85.03 | gold quality |
| pleura | UBERON:0000977 | 85.02 | silver quality |
| right lobe of thyroid gland | UBERON:0001119 | 84.63 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 84.61 | gold quality |
| left ovary | UBERON:0002119 | 84.60 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 84.53 | gold quality |
Single-cell (SCXA)
Detected in 3 experiment(s), a significant marker in 2.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 9.39 |
| E-ENAD-27 | yes | 6.19 |
| E-GEOD-100618 | no | 199.63 |
Regulation
Is transcription factor: yes
Downstream targets (CollecTRI)
1 targets.
| Target | Regulation |
|---|---|
| JUN | Activation |
Upstream regulators (CollecTRI, top): HR, NR2C2
miRNA regulators (miRDB)
96 targeting TRIM5, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-4668-3P | 100.00 | 68.74 | 2635 |
| HSA-MIR-188-3P | 100.00 | 68.76 | 1240 |
| HSA-MIR-190A-3P | 100.00 | 80.35 | 5520 |
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-1277-5P | 100.00 | 73.95 | 5056 |
| HSA-MIR-371B-5P | 99.99 | 75.34 | 4759 |
| HSA-MIR-3662 | 99.99 | 73.82 | 5684 |
| HSA-MIR-511-3P | 99.99 | 68.85 | 1467 |
| HSA-MIR-373-5P | 99.98 | 75.36 | 4753 |
| HSA-MIR-616-5P | 99.98 | 75.58 | 4775 |
| HSA-MIR-607 | 99.97 | 73.62 | 5593 |
| HSA-MIR-3658 | 99.96 | 73.87 | 4379 |
| HSA-MIR-590-3P | 99.96 | 74.34 | 6478 |
| HSA-MIR-2110 | 99.96 | 66.68 | 1930 |
| HSA-MIR-146A-5P | 99.96 | 68.93 | 988 |
| HSA-MIR-146B-5P | 99.96 | 69.13 | 977 |
| HSA-MIR-1250-3P | 99.96 | 70.04 | 4038 |
| HSA-MIR-185-3P | 99.95 | 67.01 | 1743 |
| HSA-MIR-7153-5P | 99.94 | 68.89 | 1006 |
| HSA-MIR-5680 | 99.91 | 69.83 | 3421 |
| HSA-MIR-6809-3P | 99.91 | 71.45 | 3814 |
| HSA-MIR-3671 | 99.90 | 73.04 | 3897 |
| HSA-MIR-95-5P | 99.89 | 72.17 | 3973 |
| HSA-MIR-4302 | 99.89 | 67.94 | 1187 |
| HSA-MIR-153-5P | 99.89 | 73.86 | 6317 |
| HSA-MIR-6780A-5P | 99.88 | 66.69 | 2776 |
| HSA-MIR-605-3P | 99.88 | 69.22 | 1833 |
| HSA-MIR-6124 | 99.87 | 69.78 | 3551 |
Literature-anchored findings (GeneRIF, showing 40)
- TRIM5delta colocalized with BTBD1/2 and appeared to serve as a scaffold for the assembly of endogenous BTBD1/2 proteins (PMID:12878161)
- HIV-1 infection is restricted more efficiently by rhesus monkey TRIM5alpha than by human TRIM5alpha (PMID:14985764)
- Human TRIM5alpha interacts with HIV-1 p2 capsid protein to partially block HIV infection. Rhesus macaque TRIM5alpha AAS48505.1 provides stronger block to HIV-1. (PMID:14985764)
- Data show that lentivirus susceptibility factor 1 and Ref1 are species-specific variants of tripartite interaction motif 5alpha (TRIM5alpha), a cytoplasmic body component that can block infection by widely divergent retroviruses. (PMID:15249685)
- Data show that the human and African green monkey (AGM) TRIM5alpha genes encode Ref1 and Lv1 antiretroviral activities, respectively. (PMID:15249687)
- human, rhesus, and African green monkey Trim5alpha can restrict N-tropic murine leukemia virus (PMID:15249690)
- TRIM5alpha is both necessary and sufficient for the restriction of N-MLV in human cells; B-MLV was resistant to TRIM5alpha-mediated restriction; species-specific variation in TRIM5alpha governs its ability to block infection by diverse retroviruses (PMID:15280539)
- The Trim5alpha SPRY domain was found to be responsible for targeting HIV-1 restriction. (PMID:15649369)
- the major determinant of anti-HIV-1 potency is the B30.2(SPRY) domain (PMID:15709033)
- TRIM5alpha, potently restricted infection by N-tropic murine leukemia virus (N-MLV) and moderately restricted human immunodeficiency virus type 1 (HIV-1) infection (PMID:15767395)
- heterologous expression of TRIM5alpha(rh) or TRIMCyp interferes with the anti-N-MLV activity of endogenous TRIM5alpha; data show TRIM5 orthologues form heteromultimers & C-terminal extensions alter virus recognition by multimers of these proteins (PMID:15919943)
- The SPRY domain of TRIM5alpha, showed higher nonsynonymous/synonymous substitution ratios than the non-SPRY domain, indicating that the adaptive evolution of TRIM5alpha in primates might be an innate strategy developed in defending retrovirus infection (PMID:16226405)
- results indicate that the transcription and protein synthesis of TRIM5alpha could be modulated by IFN, suggesting that TRIM5alpha may play a role in an IFN-induced antiviral state against retrovirus infection (PMID:16289103)
- An SNP at the human TRIM5 locus was found to have a functional consequence on in vitro retroviral infection of B cells. (PMID:16401428)
- TRIM5alpha levels are maintained by continuous synthesis and rapid proteasome-mediated degradation, imbalances in which result in the formation of pre-aggresomal cytoplasmic bodies; turnover of TRIM5alpha is not required for its antiretroviral activity (PMID:16472833)
- concluded that Fv1 and TRIM5 can both recognize retroviral particles early after cell entry and before reverse transcription (PMID:16474118)
- observed no effect of individual TRIM5alpha nonsynonymous mutations on the in vitro HIV-1 susceptibility of CD4(+) T cells (PMID:16474153)
- promotes HIV-1 infectivity completely independent of cyclophilin A (PMID:16501094)
- Mechanism of HIV-1 restriction by TRIM5 alpha involves engagement of the viral capsid by the restriction factor prior to completion of uncoating. (PMID:16624363)
- the positive effects of Cyp A-CA binding on HIV-1 infectivity do not depend on human TRIM5alpha (PMID:16643975)
- polymorphism in human TRIM5 may influence susceptibility to HIV-1 infection (PMID:16887163)
- This study revealed the importance of all three variable regions of TIRM5alpha B30.2 domain for determining retrovirus restriction specificity. (PMID:16912305)
- diverse TRIM5 proteins inhibit retroviral infection in multiple ways (PMID:16973579)
- TRIM5alpha-mediated HIV-1 restriction is related to selective degradation of cytosolic capsid normally associated with productive viral entry (PMID:17028189)
- results show that even a moderate over expression of wild-type TRIM5alpha in human cells (2 fold as determined by quantitative RT-PCR) confers substantial restriction to infection for HIV-1 but only a weaker restriction to infection for HIV-2 (PMID:17087820)
- The expression of TRIM5alpha, but not Fv-1, specifically promoted the premature conversion of particulate N-MLV capsids within infected cells to soluble capsid proteins. (PMID:17135314)
- investigation of properties & antiviral activities of six TRIM family members, including those closely related to TRIM5alpha; only TRIM5alpha exhibited potent antiretroviral activity; also TRIM5alpha was unique in other biochemical & genetic properties (PMID:17156811)
- Data suggest that TRIM5 alpha cytoplasmic bodies are dynamic structures more consistent with a role in function or regulation rather than protein aggregates or inclusion bodies that represent dead-end static structures. (PMID:17392513)
- H43Y has a very minor effect on anti-HIV-1 activity of TRIM5alpha, suggesting that this allele is immaterial, at least in HIV-1-infected Europeans and Asians. (PMID:17406861)
- Some alterations in the TRIM5alpha B-box 2 domain apparently affect the orientation or conformation of the B30.2(SPRY) domain, influencing capsid recognition. (PMID:17543365)
- TRIM5 alpha may have protected early humans from invasion by Pan troglodytes endogenous retrovirus (PMID:17588933)
- TRIM5alpha plays an essential role in controlling both the initial retroviral exposure and the subsequent viral dissemination in vivo. (PMID:17609277)
- TRIM5alpha-mediated retroviral restriction results from the direct binding of the antiviral PRYSPRY domain to the viral capsid in murine leukemia virus infection (PMID:18166079)
- Polymorphisms in the Trim5 gene may influence the clinical course of HIV-1 infection underscoring the antiviral effect of Trim5alpha on HIV-1 in vivo. (PMID:18248091)
- TRIM5alpha functions as a RING-finger-type E3 ubiquitin ligase both in vitro and in vivo and ubiquitinates itself in cooperation with E2 ubiquitin-conjugating enzyme UbcH5B. (PMID:18312418)
- Engagement of a restriction-sensitive retrovirus core results in TRIM5alpha degradation by a proteasome-dependent mechanism. (PMID:18497858)
- TRIM5alpha variants lacking the SPRY domain are useful for silencing TRIM5alpha activity. (PMID:18524394)
- Thus, the range of retroviruses restricted by human TRIM5alpha can be increased by changes in the B30.2/SPRY domain, which also result in the ability to cause premature uncoating of the restricted retroviral capsid. (PMID:18586294)
- TRIM5 alpha is implicated in IFN-induced anti-retroviral response in primate cells. (PMID:18613956)
- The TRIM5alpha B-box 2 domain promotes cooperative binding to the retroviral capsid by mediating higher-order self-association. (PMID:18799578)
Cross-species orthologs
10 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Trim30a | ENSMUSG00000030921 |
| mus_musculus | Trim30b | ENSMUSG00000052749 |
| mus_musculus | Trim12c | ENSMUSG00000057143 |
| mus_musculus | Trim30d | ENSMUSG00000057596 |
| mus_musculus | Trim5 | ENSMUSG00000060441 |
| mus_musculus | Trim12a | ENSMUSG00000066258 |
| mus_musculus | Trim30c | ENSMUSG00000078616 |
| rattus_norvegicus | Trim5 | ENSRNOG00000017191 |
| rattus_norvegicus | Trim30c | ENSRNOG00000031202 |
| rattus_norvegicus | ENSRNOG00000071278 |
Paralogs (80): MID2 (ENSG00000080561), TRIM9 (ENSG00000100505), MID1 (ENSG00000101871), MEFV (ENSG00000103313), TRIM35 (ENSG00000104228), TRIM14 (ENSG00000106785), TRIM37 (ENSG00000108395), TRIM2 (ENSG00000109654), TRIM3 (ENSG00000110171), TRIM38 (ENSG00000112343), TRIM62 (ENSG00000116525), TRIM67 (ENSG00000119283), TRIM32 (ENSG00000119401), BSPRY (ENSG00000119411), TRIM25 (ENSG00000121060), TRIM6 (ENSG00000121236), TRIM24 (ENSG00000122779), TRIM51 (ENSG00000124900), TRIM28 (ENSG00000130726), TRIM21 (ENSG00000132109), TRIM22 (ENSG00000132274), TRIM47 (ENSG00000132481), TRIM45 (ENSG00000134253), TRIM29 (ENSG00000137699), TRIM54 (ENSG00000138100), PML (ENSG00000140464), TRIM65 (ENSG00000141569), TRIM43B (ENSG00000144010), TRIM43 (ENSG00000144015), TRIM7 (ENSG00000146054), TRIM41 (ENSG00000146063), TRIM50 (ENSG00000146755), TRIM4 (ENSG00000146833), TRIM55 (ENSG00000147573), TRIM48 (ENSG00000150244), TRIM36 (ENSG00000152503), TRIM11 (ENSG00000154370), TRIM74 (ENSG00000155428), TRIM42 (ENSG00000155890), TRIM63 (ENSG00000158022)
Protein
Protein identifiers
Tripartite motif-containing protein 5 — Q9C035 (reviewed: Q9C035)
Alternative names: RING finger protein 88, RING-type E3 ubiquitin transferase TRIM5
All UniProt accessions (5): Q9C035, A0A804HHS7, C9JWN8, E7EQQ5, H7C134
UniProt curated annotations — full annotation on UniProt →
Function. Capsid-specific restriction factor that prevents infection from non-host-adapted retroviruses. Blocks viral replication early in the life cycle, after viral entry but before reverse transcription. In addition to acting as a capsid-specific restriction factor, also acts as a pattern recognition receptor that activates innate immune signaling in response to the retroviral capsid lattice. Binding to the viral capsid triggers its E3 ubiquitin ligase activity, and in concert with the heterodimeric ubiquitin conjugating enzyme complex UBE2V1-UBE2N (also known as UBC13-UEV1A complex) generates ‘Lys-63’-linked polyubiquitin chains, which in turn are catalysts in the autophosphorylation of the MAP3K7/TAK1 complex (includes TAK1, TAB2, and TAB3). Activation of the MAP3K7/TAK1 complex by autophosphorylation results in the induction and expression of NF-kappa-B and MAPK-responsive inflammatory genes, thereby leading to an innate immune response in the infected cell. Restricts infection by N-tropic murine leukemia virus (N-MLV), equine infectious anemia virus (EIAV), simian immunodeficiency virus of macaques (SIVmac), feline immunodeficiency virus (FIV), and bovine immunodeficiency virus (BIV). Plays a role in regulating autophagy through activation of autophagy regulator BECN1 by causing its dissociation from its inhibitors BCL2 and TAB2. Also plays a role in autophagy by acting as a selective autophagy receptor which recognizes and targets HIV-1 capsid protein p24 for autophagic destruction.
Subunit / interactions. Can form homodimers and homotrimers. In addition to lower-order dimerization, also exhibits a higher-order multimerization and both low- and high-order multimerizations are essential for its restriction activity. Isoform Delta interacts with BTBD1 and BTBD2. Interacts with PSMC4, PSMC5, PSMD7 and HSPA8/HSC70. Interacts (via B30.2/SPRY domain) with HSPA1A/B. Interacts with PSMC2, MAP3K7/TAK1, TAB2 and TAB3. Interacts with SQSTM1. Interacts with TRIM6 and TRIM34. Interacts with ULK1 (phosphorylated form), GABARAP, GABARAPL1, GABARAPL2, MAP1LC3A, MAP1LC3C and BECN1.
Subcellular location. Cytoplasm. Nucleus.
Post-translational modifications. Degraded in a proteasome-independent fashion in the absence of viral infection but in a proteasome-dependent fashion following exposure to restriction sensitive virus. Autoubiquitinated in a RING finger- and UBE2D2-dependent manner. Monoubiquitinated by TRIM21. Deubiquitinated by Yersinia YopJ. Ubiquitination may not lead to proteasomal degradation.
Domain organisation. The B box-type zinc finger domain and the coiled-coil domain contribute to the higher and low order multimerization respectively which is essential for restriction activity. The coiled coil domain is important for higher order multimerization by promoting the initial dimerization. The B30.2/SPRY domain acts as a capsid recognition domain. Polymorphisms in this domain explain the observed species-specific differences among orthologs. The RING-type zinc finger domain confers E3 ubiquitin ligase activity and is essential for retrovirus restriction activity, autoubiquitination and higher-order multimerization.
Pathway. Protein modification; protein ubiquitination.
Miscellaneous. Probable artifact. Has dominant-negative activity against TRIM5alpha. Does not inhibit HIV-1 replication.
Similarity. Belongs to the TRIM/RBCC family.
Isoforms (6)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q9C035-1 | Alpha | yes |
| Q9C035-2 | Beta | |
| Q9C035-3 | Gamma | |
| Q9C035-4 | Delta | |
| Q9C035-5 | Epsilon, Kappa | |
| Q9C035-6 | Iota |
RefSeq proteins (4): NP_001397887, NP_149023, NP_149083, NP_149084 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000315 | Znf_B-box | Domain |
| IPR001841 | Znf_RING | Domain |
| IPR001870 | B30.2/SPRY | Domain |
| IPR003877 | SPRY_dom | Domain |
| IPR003879 | Butyrophylin_SPRY | Domain |
| IPR013083 | Znf_RING/FYVE/PHD | Homologous_superfamily |
| IPR013320 | ConA-like_dom_sf | Homologous_superfamily |
| IPR017907 | Znf_RING_CS | Conserved_site |
| IPR027370 | Znf-RING_euk | Domain |
| IPR043136 | B30.2/SPRY_sf | Homologous_superfamily |
| IPR050143 | TRIM/RBCC | Family |
Pfam: PF00622, PF00643, PF13445
Enzyme classification (BRENDA):
- EC 2.3.2.27 — RING-type E3 ubiquitin transferase (BRENDA: 28 organisms, 138 substrates, 10 inhibitors, 1 Km, 1 kcat entries)
Substrate kinetics (BRENDA)
1 substrates with measured Km, best-characterized 1. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| [UBE2W]-S-UBIQUITINYL-L-CYSTEINE | 0.3014 | 1 |
UniProt features (53 total): splice variant 10, sequence variant 10, turn 6, strand 6, binding site 4, mutagenesis site 4, modified residue 2, zinc finger region 2, sequence conflict 2, helix 2, initiator methionine 1, chain 1, domain 1, region of interest 1, coiled-coil region 1
Structure
Experimental structures (PDB)
2 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 2ECV | SOLUTION NMR | |
| 2YRG | SOLUTION NMR |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q9C035-F1 | 86.18 | 0.59 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (4): 123; 95; 98; 117
Post-translational modifications (2): 2, 86
Mutagenesis-validated functional residues (4):
| Position | Phenotype |
|---|---|
| 15 | abolishes e3 ligase activity. |
| 332 | increases strongly cell restriction against hiv-1 and sivmac infection. |
| 332 | increases strongly cell restriction against hiv-1 infection. |
| 332 | no effect on hiv-1 and sivmac infection. |
Function
Pathways and Gene Ontology
Reactome pathways
1 pathways
| ID | Pathway |
|---|---|
| R-HSA-877300 | Interferon gamma signaling |
MSigDB gene sets: 283 (showing top):
REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM, GOBP_CELLULAR_RESPONSE_TO_LIPID, GOBP_CELLULAR_RESPONSE_TO_BIOTIC_STIMULUS, GRAESSMANN_APOPTOSIS_BY_SERUM_DEPRIVATION_UP, GOBP_CANONICAL_NF_KAPPAB_SIGNAL_TRANSDUCTION, GRAESSMANN_RESPONSE_TO_MC_AND_SERUM_DEPRIVATION_UP, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_UP, GOBP_POSITIVE_REGULATION_OF_MAPK_CASCADE, GOBP_MODULATION_OF_PROCESS_OF_ANOTHER_ORGANISM, GOBP_CELLULAR_RESPONSE_TO_OXYGEN_CONTAINING_COMPOUND, GOBP_POSITIVE_REGULATION_OF_RESPONSE_TO_EXTERNAL_STIMULUS, GOBP_REGULATION_OF_IMMUNE_RESPONSE, GOBP_POSITIVE_REGULATION_OF_MOLECULAR_FUNCTION, GOBP_DEFENSE_RESPONSE_TO_OTHER_ORGANISM, GOBP_REGULATION_OF_BIOLOGICAL_PROCESS_INVOLVED_IN_SYMBIOTIC_INTERACTION
GO Biological Process (18): activation of innate immune response (GO:0002218), autophagy (GO:0006914), regulation of gene expression (GO:0010468), regulation of lipopolysaccharide-mediated signaling pathway (GO:0031664), regulation of protein localization (GO:0032880), positive regulation of canonical NF-kappaB signal transduction (GO:0043123), positive regulation of MAPK cascade (GO:0043410), suppression of viral release by host (GO:0044790), innate immune response (GO:0045087), regulation of viral entry into host cell (GO:0046596), host-mediated suppression of symbiont invasion (GO:0046597), obsolete positive regulation of NF-kappaB transcription factor activity (GO:0051092), defense response to virus (GO:0051607), protein K63-linked ubiquitination (GO:0070534), immune system process (GO:0002376), protein ubiquitination (GO:0016567), positive regulation of DNA-templated transcription (GO:0045893), regulation of primary metabolic process (GO:0080090)
GO Molecular Function (12): transcription coactivator activity (GO:0003713), ubiquitin-protein transferase activity (GO:0004842), zinc ion binding (GO:0008270), protein kinase binding (GO:0019901), protein-macromolecule adaptor activity (GO:0030674), pattern recognition receptor activity (GO:0038187), identical protein binding (GO:0042802), protein homodimerization activity (GO:0042803), ubiquitin protein ligase activity (GO:0061630), protein binding (GO:0005515), transferase activity (GO:0016740), metal ion binding (GO:0046872)
GO Cellular Component (5): P-body (GO:0000932), nucleus (GO:0005634), cytoplasm (GO:0005737), cytosol (GO:0005829), omegasome (GO:1990462)
Reactome top-level categories
Rollup of top-1 pathways:
| Category | Pathways |
|---|---|
| Interferon Signaling | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| positive regulation of intracellular signal transduction | 2 |
| protein binding | 2 |
| intracellular membrane-bounded organelle | 2 |
| cellular anatomical structure | 2 |
| activation of immune response | 1 |
| positive regulation of innate immune response | 1 |
| catabolic process | 1 |
| transmembrane transport | 1 |
| process utilizing autophagic mechanism | 1 |
| gene expression | 1 |
| regulation of macromolecule biosynthetic process | 1 |
| regulation of response to biotic stimulus | 1 |
| regulation of signal transduction | 1 |
| lipopolysaccharide-mediated signaling pathway | 1 |
| regulation of response to external stimulus | 1 |
| intracellular protein localization | 1 |
| regulation of localization | 1 |
| canonical NF-kappaB signal transduction | 1 |
| regulation of canonical NF-kappaB signal transduction | 1 |
| MAPK cascade | 1 |
| regulation of MAPK cascade | 1 |
| defense response to virus | 1 |
| immune response | 1 |
| defense response to symbiont | 1 |
| symbiont entry into host cell | 1 |
| modulation by symbiont of entry into host | 1 |
| regulation of viral life cycle | 1 |
| innate immune response | 1 |
| host-mediated perturbation of symbiont process | 1 |
| defense response | 1 |
| response to virus | 1 |
| protein polyubiquitination | 1 |
| biological_process | 1 |
| protein modification by small protein conjugation | 1 |
| DNA-templated transcription | 1 |
| regulation of DNA-templated transcription | 1 |
| positive regulation of RNA biosynthetic process | 1 |
| regulation of metabolic process | 1 |
| primary metabolic process | 1 |
| transcription coregulator activity | 1 |
Protein interactions and networks
STRING
1261 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| TRIM5 | TRAT1 | Q6PIZ9 | 947 |
| TRIM5 | BTBD2 | Q9BX70 | 942 |
| TRIM5 | APOBEC3G | Q9HC16 | 920 |
| TRIM5 | BTBD1 | Q9H0C5 | 903 |
| TRIM5 | PPIA | P05092 | 899 |
| TRIM5 | SAMHD1 | Q9Y3Z3 | 884 |
| TRIM5 | BBOX1 | O75936 | 854 |
| TRIM5 | BST2 | Q10589 | 842 |
| TRIM5 | ATG16L1 | Q676U5 | 803 |
| TRIM5 | UBE2N | P61088 | 795 |
| TRIM5 | AMBRA1 | Q9C0C7 | 773 |
| TRIM5 | TMLHE | Q9NVH6 | 772 |
| TRIM5 | TNPO3 | Q9Y5L0 | 768 |
| TRIM5 | BECN1 | Q14457 | 744 |
| TRIM5 | CCR5 | P51681 | 734 |
IntAct
42 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| CFTR | ESYT2 | psi-mi:“MI:0914”(association) | 0.710 |
| FAM9C | NDC80 | psi-mi:“MI:0914”(association) | 0.670 |
| TRIM5 | TRIM5 | psi-mi:“MI:0915”(physical association) | 0.630 |
| CFTR | TRIM5 | psi-mi:“MI:0915”(physical association) | 0.550 |
| TRIM5 | TRIM34 | psi-mi:“MI:0915”(physical association) | 0.550 |
| TRIM5 | TRIM32 | psi-mi:“MI:0915”(physical association) | 0.510 |
| ZWINT | psi-mi:“MI:0915”(physical association) | 0.400 | |
| TRIM5 | SNAI1 | psi-mi:“MI:0915”(physical association) | 0.400 |
| SNAI1 | TRIM5 | psi-mi:“MI:0915”(physical association) | 0.400 |
| HIP2 | TRIM5 | psi-mi:“MI:0915”(physical association) | 0.370 |
| TRIM5 | UBE2D1 | psi-mi:“MI:0915”(physical association) | 0.370 |
| UBE2D3 | TRIM5 | psi-mi:“MI:0915”(physical association) | 0.370 |
| UBE2H | TRIM5 | psi-mi:“MI:0915”(physical association) | 0.370 |
| TRIM5 | UBE2N | psi-mi:“MI:0915”(physical association) | 0.370 |
| TRIM5 | UBE2V1 | psi-mi:“MI:0915”(physical association) | 0.370 |
| TRIM5 | UBE2V2 | psi-mi:“MI:0915”(physical association) | 0.370 |
| TRIM5 | UBE2D4 | psi-mi:“MI:0915”(physical association) | 0.370 |
| TRIM5 | UBE2U | psi-mi:“MI:0915”(physical association) | 0.370 |
| EWSR1 | TRIM5 | psi-mi:“MI:0915”(physical association) | 0.370 |
| PCBD1 | TRIM5 | psi-mi:“MI:0915”(physical association) | 0.370 |
| LZTR1 | TRIM5 | psi-mi:“MI:0915”(physical association) | 0.370 |
| TRIM5 | MNAT1 | psi-mi:“MI:0915”(physical association) | 0.370 |
| MKRN3 | TRIM5 | psi-mi:“MI:0915”(physical association) | 0.370 |
| Ppp2ca | DKFZP586J0619 | psi-mi:“MI:0914”(association) | 0.350 |
| Xpo1 | IFT56 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (161): TRIM5 (Biochemical Activity), UBE2D2 (Reconstituted Complex), TRIM5 (Biochemical Activity), UBE2D3 (Reconstituted Complex), TRIM5 (Affinity Capture-MS), TRIM5 (Affinity Capture-MS), UL123 (Affinity Capture-Western), TRIM5 (Biochemical Activity), UBE2N (Reconstituted Complex), UBE2D3 (Reconstituted Complex), TRIM5 (Reconstituted Complex), TRIM5 (Co-crystal Structure), SUMO1 (Co-localization), TRIM5 (Biochemical Activity), CUEDC1 (Affinity Capture-MS)
ESM2 similar proteins: A0A3B3IT33, A6NCK2, A6NDI0, A6NGJ6, A6NI03, A6NLI5, C9J1S8, I1YAP6, K7N6K2, P0CI25, P0CI26, P15533, Q0PF16, Q1ACD5, Q1ACD6, Q1ACD7, Q1ACD8, Q2YEM8, Q2YEM9, Q2YEN0, Q2YEN2, Q3ZEE5, Q587N6, Q587N7, Q5BN31, Q5C8T6, Q5C8T8, Q5C8U1, Q5C8U3, Q5C8U4, Q5D7H7, Q5D7H8, Q5D7I0, Q5D7I1, Q5D7I2, Q5D7I3, Q5D7I5, Q5D7I6, Q5D7I9, Q5D7J0
Diamond homologs: A0JN74, A6NCK2, A6NDI0, A6NGJ6, A6NI03, A6NK02, A6NLI5, B1H278, C9J1S8, K7N6K2, O00635, O15553, O19085, O77666, P0CI25, P0CI26, P14373, P15533, P18892, P19474, Q02084, Q0PF16, Q12899, Q13410, Q1ACD5, Q1ACD6, Q1ACD7, Q1ACD8, Q1XHU0, Q2T9Z0, Q2YEM8, Q2YEM9, Q2YEN0, Q2YEN2, Q3UWZ0, Q3ZEE5, Q495X7, Q587N6, Q587N7, Q58DK8
SIGNOR signaling
4 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| Ub:E2 | “up-regulates activity” | TRIM5 | ubiquitination |
| UBE2D2 | “up-regulates activity” | TRIM5 | binding |
| TRIM5 | “up-regulates quantity” | TRIM5 | monoubiquitination |
| TRIM21 | “up-regulates quantity” | TRIM5 | monoubiquitination |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 37 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Antigen processing: Ubiquitination & Proteasome degradation | 9 | 14.6× | 7e-07 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| protein K63-linked ubiquitination | 5 | 46.1× | 7e-06 |
| protein polyubiquitination | 9 | 35.8× | 4e-10 |
| ubiquitin-dependent protein catabolic process | 5 | 12.8× | 8e-04 |
| protein ubiquitination | 8 | 11.4× | 1e-05 |
| proteasome-mediated ubiquitin-dependent protein catabolic process | 5 | 9.0× | 3e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
122 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 87 |
| Likely benign | 14 |
| Benign | 4 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
4999 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 11:5679018:T:TA | donor_gain | 1.0000 |
| 11:5679019:C:A | donor_gain | 1.0000 |
| 11:5679047:A:AC | donor_gain | 1.0000 |
| 11:5679048:C:CC | donor_gain | 1.0000 |
| 11:5679050:C:CA | donor_gain | 1.0000 |
| 11:5679064:AT:A | donor_gain | 1.0000 |
| 11:5679065:T:TA | donor_gain | 1.0000 |
| 11:5679076:T:A | donor_gain | 1.0000 |
| 11:5679759:A:AC | donor_gain | 1.0000 |
| 11:5679760:C:CC | donor_gain | 1.0000 |
| 11:5679769:C:CA | donor_gain | 1.0000 |
| 11:5697340:G:GT | donor_gain | 1.0000 |
| 11:5697348:G:GT | donor_gain | 1.0000 |
| 11:5697366:GGA:G | donor_gain | 1.0000 |
| 11:5697367:G:T | donor_gain | 1.0000 |
| 11:5697380:G:GT | donor_gain | 1.0000 |
| 11:5698306:A:AG | acceptor_gain | 1.0000 |
| 11:5698310:CCAA:C | acceptor_loss | 1.0000 |
| 11:5698312:A:AG | acceptor_gain | 1.0000 |
| 11:5698313:A:AG | acceptor_gain | 1.0000 |
| 11:5698314:G:GG | acceptor_gain | 1.0000 |
| 11:5698314:G:GT | acceptor_loss | 1.0000 |
| 11:5698314:GA:G | acceptor_gain | 1.0000 |
| 11:5698314:GAA:G | acceptor_gain | 1.0000 |
| 11:5698314:GAAT:G | acceptor_gain | 1.0000 |
| 11:5698314:GAATT:G | acceptor_gain | 1.0000 |
| 11:5698544:AGGT:A | donor_loss | 1.0000 |
| 11:5698546:G:A | donor_loss | 1.0000 |
| 11:5709051:A:AG | acceptor_gain | 1.0000 |
| 11:5709052:G:GG | acceptor_gain | 1.0000 |
AlphaMissense
3253 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 11:5665210:A:G | W361R | 0.990 |
| 11:5665210:A:T | W361R | 0.990 |
| 11:5665180:A:G | W371R | 0.987 |
| 11:5665180:A:T | W371R | 0.987 |
| 11:5664938:G:C | F451L | 0.986 |
| 11:5664938:G:T | F451L | 0.986 |
| 11:5664940:A:G | F451L | 0.986 |
| 11:5665208:C:A | W361C | 0.986 |
| 11:5665208:C:G | W361C | 0.986 |
| 11:5664899:A:C | F464L | 0.983 |
| 11:5664899:A:T | F464L | 0.983 |
| 11:5664901:A:G | F464L | 0.983 |
| 11:5665171:C:A | G374W | 0.983 |
| 11:5664968:G:C | F441L | 0.981 |
| 11:5664968:G:T | F441L | 0.981 |
| 11:5664970:A:G | F441L | 0.981 |
| 11:5664945:A:T | V449D | 0.978 |
| 11:5665170:C:T | G374E | 0.976 |
| 11:5679863:G:C | F105L | 0.972 |
| 11:5679863:G:T | F105L | 0.972 |
| 11:5679865:A:G | F105L | 0.972 |
| 11:5665209:C:G | W361S | 0.970 |
| 11:5664939:A:G | F451S | 0.968 |
| 11:5665171:C:G | G374R | 0.968 |
| 11:5665171:C:T | G374R | 0.968 |
| 11:5665213:A:C | Y360D | 0.967 |
| 11:5664932:A:C | N453K | 0.964 |
| 11:5664932:A:T | N453K | 0.964 |
| 11:5679838:A:G | C114R | 0.964 |
| 11:5664972:A:T | V440D | 0.960 |
dbSNP variants (sampled 300 via entrez): RS1000011327 (11:5630522 G>T), RS1000043628 (11:5630215 A>T), RS1000045375 (11:5613101 C>T), RS1000081513 (11:5659020 G>C), RS1000111751 (11:5675453 C>A,T), RS1000135029 (11:5593280 T>C), RS1000137673 (11:5598084 T>A,C), RS1000139707 (11:5629996 G>A), RS1000165634 (11:5627135 T>G), RS1000172583 (11:5588774 G>A), RS1000190275 (11:5598418 A>C,G), RS1000191669 (11:5673784 G>A,T), RS1000205321 (11:5636909 G>A), RS1000218152 (11:5642596 C>A,T), RS1000227735 (11:5675185 C>G,T)
Disease associations
OMIM: gene MIM:608487 | disease phenotypes:
GenCC curated gene-disease
Mondo (1): prostate cancer (MONDO:0008315)
Orphanet (1): Familial prostate cancer (Orphanet:1331)
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
38 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST002058_10 | DNA methylation (variation) | 3.000000e-06 |
| GCST004286_5 | Midgestational circulating levels of PBDEs (fetal genetic effect) | 6.000000e-07 |
| GCST004599_17 | Mean platelet volume | 2.000000e-12 |
| GCST004599_18 | Mean platelet volume | 6.000000e-19 |
| GCST004599_19 | Mean platelet volume | 6.000000e-24 |
| GCST005194_105 | Coronary artery disease | 2.000000e-12 |
| GCST005195_51 | Coronary artery disease | 6.000000e-13 |
| GCST005196_41 | Coronary artery disease | 3.000000e-06 |
| GCST005196_42 | Coronary artery disease | 2.000000e-12 |
| GCST005991_18 | Platelet count | 9.000000e-10 |
| GCST006016_20 | Serum alkaline phosphatase levels | 1.000000e-09 |
| GCST010204_112 | Low density lipoprotein cholesterol levels | 3.000000e-24 |
| GCST010241_20 | Apolipoprotein A1 levels | 7.000000e-18 |
| GCST010242_162 | HDL cholesterol levels | 9.000000e-12 |
| GCST010243_199 | Apolipoprotein B levels | 9.000000e-25 |
| GCST010243_232 | Apolipoprotein B levels | 4.000000e-10 |
| GCST010245_174 | LDL cholesterol levels | 2.000000e-15 |
| GCST010245_89 | LDL cholesterol levels | 2.000000e-08 |
| GCST010725_20 | Malaria | 4.000000e-69 |
| GCST010725_33 | Malaria | 2.000000e-67 |
| GCST010725_51 | Malaria | 1.000000e-55 |
| GCST010866_150 | Coronary artery disease | 4.000000e-15 |
| GCST011353_9 | Serum alkaline phosphatase levels | 2.000000e-11 |
| GCST011365_142 | Myocardial infarction | 2.000000e-06 |
| GCST90000255_12 | Severe COVID-19 infection with respiratory failure (analysis I) | 4.000000e-06 |
| GCST90002395_73 | Mean platelet volume | 2.000000e-09 |
| GCST90002395_74 | Mean platelet volume | 3.000000e-14 |
| GCST90002395_75 | Mean platelet volume | 4.000000e-20 |
| GCST90002395_76 | Mean platelet volume | 1.000000e-16 |
| GCST90002395_77 | Mean platelet volume | 1.000000e-18 |
EFO canonical traits (12, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0022599 | DNA methylation |
| EFO:0007959 | fetal genotype effect measurement |
| EFO:0007961 | polybrominated biphenyl measurement |
| EFO:0007962 | polybrominated diphenyl ether measurement |
| EFO:0007964 | gestational serum measurement |
| EFO:0004309 | platelet count |
| EFO:0004533 | alkaline phosphatase measurement |
| EFO:0004611 | low density lipoprotein cholesterol measurement |
| EFO:0004614 | apolipoprotein A 1 measurement |
| EFO:0004612 | high density lipoprotein cholesterol measurement |
| EFO:0004615 | apolipoprotein B measurement |
| EFO:0004736 | aspartate aminotransferase measurement |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D011471 | Prostatic Neoplasms | C04.588.945.440.770; C12.100.500.260.750; C12.100.500.565.625; C12.200.294.260.750; C12.200.294.565.625; C12.200.758.409.750; C12.900.619.750 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB variants
1 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs7950311 | TRIM5 | 0.00 | 0 |
CTD chemical–gene interactions
42 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| sodium arsenite | decreases expression, increases abundance, increases expression | 3 |
| Acetaminophen | increases expression, decreases expression | 2 |
| Phenylmercuric Acetate | affects cotreatment, increases expression | 2 |
| Valproic Acid | affects expression, decreases expression | 2 |
| alpha-pinene | increases oxidation, increases abundance, affects cotreatment | 1 |
| bisphenol A | decreases methylation | 1 |
| beta-lapachone | decreases expression, increases expression | 1 |
| arsenite | decreases reaction, affects binding | 1 |
| sulforaphane | decreases expression | 1 |
| cobaltous chloride | decreases expression | 1 |
| manganese chloride | increases abundance, increases expression | 1 |
| potassium chromate(VI) | affects cotreatment, decreases expression | 1 |
| methacrylaldehyde | affects cotreatment, increases oxidation, increases abundance | 1 |
| S-(1,2-dichlorovinyl)cysteine | affects response to substance, increases expression | 1 |
| epigallocatechin gallate | affects cotreatment, decreases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, increases expression | 1 |
| ICG 001 | decreases expression | 1 |
| dorsomorphin | affects cotreatment, increases expression | 1 |
| eprenetapopt | affects expression, affects reaction | 1 |
| Resveratrol | affects cotreatment, increases expression | 1 |
| Sunitinib | decreases expression | 1 |
| Acrolein | affects cotreatment, increases oxidation, increases abundance | 1 |
| Air Pollutants | affects cotreatment, increases abundance, increases oxidation | 1 |
| Arsenic | increases abundance, increases expression | 1 |
| Cytarabine | decreases expression | 1 |
| Diethylstilbestrol | increases expression | 1 |
| Succimer | affects cotreatment, increases expression | 1 |
| Estradiol | decreases expression | 1 |
| Lipopolysaccharides | increases expression, affects response to substance | 1 |
Cellosaurus cell lines
2 cell lines: 2 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_TU32 | HAP1 TRIM5 (-) 1 | Cancer cell line | Male |
| CVCL_TU33 | HAP1 TRIM5 (-) 2 | Cancer cell line | Male |
Clinical trials (associated diseases)
300 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00029224 | PHASE4 | COMPLETED | Treatment With Zoledronic Acid in Patients With Breast Cancer, Multiple Myeloma, and Prostate Cancer With Cancer Related Bone Lesions |
| NCT00035997 | PHASE4 | COMPLETED | Open-label Trial on the Effect of I.V. Zoledronic Acid 4 mg on Bone Density in Hormone Sensitive Prostate Cancer Patients With Bone Metastasis |
| NCT00063609 | PHASE4 | COMPLETED | The Effect of Zoledronic Acid on Bone Loss in Prostate Cancer Patients Undergoing Androgen Deprivation Therapy |
| NCT00103623 | PHASE4 | SUSPENDED | The Plenaxis® Experience Study |
| NCT00106392 | PHASE4 | COMPLETED | A Safety and Efficacy Study of Prograf in the Prevention of Erectile Dysfunction After Radical Prostatectomy |
| NCT00185029 | PHASE4 | UNKNOWN | MR-Lymphography and Lymph Node Staging in Prostate Cancer |
| NCT00199485 | PHASE4 | COMPLETED | Angelica Sinensis for the Treatment of Hot Flashes in Men Undergoing LHRH Therapy for Prostate Cancer |
| NCT00219219 | PHASE4 | COMPLETED | Zoledronic Acid in the Prevention of Skeletal-related Events in Hormone Refractory and Hormone-sensitive Prostate Cancer Patients With Bone Metastases |
| NCT00219271 | PHASE4 | COMPLETED | Effect Of Zoledronic Acid On Circulating And Bone Marrow-Residing Prostate Cancer Cells In Patients With Clinically Localized Prostate Cancer |
| NCT00237146 | PHASE4 | COMPLETED | Study to Evaluate Zoledronic Acid on Quality of Life and Skeletal-related Events as Adjuvant Treatment in Patients With Hormone-naïve Prostate Cancer and Bone Metastasis Who Have Undergone Orchiectomy |
| NCT00242554 | PHASE4 | COMPLETED | Open-label Phase IV Clinical Trial to Evaluate the Safety and Tolerability of Zoledronic Acid in Patients With Prostate Cancer and Bone Metastases |
| NCT00280098 | PHASE4 | COMPLETED | Docetaxel in the Treatment of Hormone Refractory Prostate Cancer |
| NCT00293696 | PHASE4 | COMPLETED | Casodex/Zoladex Biomarkers in Localised Prostate Cancer |
| NCT00334139 | PHASE4 | COMPLETED | Effect of Zoledronic Acid on Bone Metabolism in Patients With Bone Metastasis and Prostate or Breast Cancer |
| NCT00375765 | PHASE4 | COMPLETED | Effects On Dihydrotestosterone Regulated Gene Expression In Benign Prostatic Hyperplasia Or Prostate Cancer |
| NCT00391690 | PHASE4 | COMPLETED | Evaluation of Bone Markers as Diagnostic Tools for Early Detection of Bone Metastases in Patients With High Risk Prostate Cancer |
| NCT00422708 | PHASE4 | COMPLETED | Local Anesthesia for Prostate Biopsy |
| NCT00526331 | PHASE4 | COMPLETED | Evaluation of Arterial Pressure Based Cardiac Output for Goal-Directed Perioperative Therapy |
| NCT00590213 | PHASE4 | COMPLETED | Compare the Value of Prophylactic Versus Therapeutic Breast Radiotherapy in CASODEX |
| NCT00629330 | PHASE4 | TERMINATED | Dissemination of Prostate Cancer Screening to PCP’s in African American Communities |
| NCT00771966 | PHASE4 | COMPLETED | Radical Prostatectomy and Perioperative Fluid Therapy |
| NCT00805701 | PHASE4 | COMPLETED | Study Assessing The Efficacy And Safety Of Avodart (Dutasteride) At Improving Urinary Symptoms In Men With Prostate Cancer Who Are Undergoing Seed Implantation |
| NCT00859027 | PHASE4 | COMPLETED | Effect Of Risedronate On Bone Mass In Older Men Receiving Neoadjuvant Therapy For Prostate Cancer |
| NCT00906269 | PHASE4 | UNKNOWN | Can Hyperbaric Oxygen Improve Erectile Function Following Surgery for Prostate Cancer |
| NCT00953277 | PHASE4 | COMPLETED | Study of Nerve Reconstruction Using AVANCE in Subjects Who Undergo Robotic Assisted Prostatectomy for Treatment of Prostate Cancer |
| NCT00982800 | PHASE4 | COMPLETED | Does Postoperative Gabapentin Reduce Pain, Opioid Consumption and Anxiety and Have a Positive Effect on Health Related Quality of Life After Radical Prostatectomy? |
| NCT01083199 | PHASE4 | COMPLETED | Global Performance Evaluation of the AMS CONTINUUM™ Device |
| NCT01136226 | PHASE4 | COMPLETED | Evaluate Recovery of Testosterone for Patients Using Eligard |
| NCT01161563 | PHASE4 | COMPLETED | Randomized Crossover Trial to Assess the Tolerability of Gonadotropin Releasing Hormone (GnRH) Analogue Administration |
| NCT01230905 | PHASE4 | COMPLETED | Study to Monitor the Effects of Androgen Suppression Treatment on the Heart |
| NCT01296672 | PHASE4 | COMPLETED | 3 Month Finasteride Challenge Test Can Significantly Improve the Performance of Screening for Prostate Cancer |
| NCT01365143 | PHASE4 | TERMINATED | Prospective Randomized Trial Comparing Robotic Versus Open Radical Prostatectomy |
| NCT01379742 | PHASE4 | UNKNOWN | Comparison of Between ThinSeed™ and OncoSeed™ for Permanent Prostate Brachytherapy |
| NCT01486563 | PHASE4 | COMPLETED | Hydroxyethyl Starch and Renal Function After Radical Prostatectomy |
| NCT01511874 | PHASE4 | COMPLETED | Efficacy and Safety Study of ELIGARD 22.5mg With Prostate Cancer |
| NCT01512472 | PHASE4 | TERMINATED | Firmagon (Degarelix) Intermittent Therapy |
| NCT01547416 | PHASE4 | COMPLETED | The Effect of Combined General/Epidural Anesthesia Versus General Anesthesia on Diaphragmatic Function |
| NCT01571544 | PHASE4 | COMPLETED | The Use of Thermal Suits as Preventing Hypothermia During Surgery |
| NCT01581749 | PHASE4 | UNKNOWN | Evaluation of Truebeam for Low-Intermediate Risk Prostate Cancer |
| NCT01649635 | PHASE4 | COMPLETED | Study of Cabazitaxel Combined With Prednisone and Prophylaxis of Neutropenia Complications in the Treatment of Patients With Metastatic Castration-resistant Prostate Cancer |
Related Atlas pages
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): COVID-19, myocardial infarction