TRIM7-AS2

Summary

TRIM7-AS2 (TRIM7 antisense RNA 2, HGNC:56031) is a long non-coding RNA gene on chromosome 5q35.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56031
Approved symbol	TRIM7-AS2
Name	TRIM7 antisense RNA 2
Location	5q35.3
Locus type	RNA, long non-coding
Status	Approved
Aliases	CTC-338M12.5
Ensembl gene	ENSG00000250222
Ensembl biotype	lncRNA
Entrez	105377769
RNAcentral	URS00026A1C64 — lncRNA, 2775 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 18 — 18 lncRNA

ENST00000508877, ENST00000514487, ENST00000514784, ENST00000664992, ENST00000688148, ENST00000702415, ENST00000725220, ENST00000725221, ENST00000725222, ENST00000725286, ENST00000725292, ENST00000725293, ENST00000725294, ENST00000725295, ENST00000725296, ENST00000725297, ENST00000725298, ENST00000725299

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000508877 — 3 exons

Exon	Start	End
ENSE00002022836	181193342	181193467
ENSE00003983610	181194234	181194434
ENSE00004048777	181191968	181192140

Expression profiles

Bgee: expression breadth ubiquitous, 133 present calls, max score 92.46.

Top tissues by expression

133 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
left testis	UBERON:0004533	92.46	gold quality
right testis	UBERON:0004534	92.32	gold quality
testis	UBERON:0000473	91.71	gold quality
putamen	UBERON:0001874	90.01	gold quality
nucleus accumbens	UBERON:0001882	89.81	gold quality
amygdala	UBERON:0001876	88.72	gold quality
temporal lobe	UBERON:0001871	88.65	gold quality
caudate nucleus	UBERON:0001873	88.41	gold quality
Ammon’s horn	UBERON:0001954	88.23	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	87.71	gold quality
anterior cingulate cortex	UBERON:0009835	87.06	gold quality
substantia nigra	UBERON:0002038	87.00	gold quality
pituitary gland	UBERON:0000007	86.03	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	85.68	gold quality
hindlimb stylopod muscle	UBERON:0004252	85.62	gold quality
adenohypophysis	UBERON:0002196	85.54	gold quality
Brodmann (1909) area 9	UBERON:0013540	85.09	gold quality
hypothalamus	UBERON:0001898	85.08	gold quality
right atrium auricular region	UBERON:0006631	84.88	gold quality
right frontal lobe	UBERON:0002810	84.60	gold quality
brain	UBERON:0000955	84.50	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	84.46	gold quality
primary visual cortex	UBERON:0002436	84.07	gold quality
heart left ventricle	UBERON:0002084	83.88	gold quality
cerebral cortex	UBERON:0000956	83.15	gold quality
heart	UBERON:0000948	83.11	gold quality
apex of heart	UBERON:0002098	83.07	gold quality
superior frontal gyrus	UBERON:0002661	82.32	gold quality
gastrocnemius	UBERON:0001388	80.72	gold quality
skeletal muscle tissue	UBERON:0001134	80.59	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.57

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.