TRPM1-AS1

Summary

TRPM1-AS1 (TRPM1 antisense RNA 1, HGNC:58477) is a long non-coding RNA gene on chromosome 15q13.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:58477
Approved symbol	TRPM1-AS1
Name	TRPM1 antisense RNA 1
Location	15q13.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000259720
Ensembl biotype	lncRNA
Entrez	105370752

Gene structure

Transcript identifiers

Ensembl transcripts: 3 — 3 lncRNA

ENST00000558755, ENST00000561299, ENST00000665655

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000558755 — 4 exons

Exon	Start	End
ENSE00002547652	31035753	31035970
ENSE00002554918	31026965	31027111
ENSE00002564481	31026206	31026318
ENSE00002567468	31035570	31035656

Expression profiles

Bgee: expression breadth broad, 92 present calls, max score 70.90.

Top tissues by expression

205 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
left testis	UBERON:0004533	70.90	gold quality
right testis	UBERON:0004534	70.06	gold quality
sperm	CL:0000019	69.05	gold quality
testis	UBERON:0000473	69.01	gold quality
tibialis anterior	UBERON:0001385	63.14	silver quality
skeletal muscle tissue of rectus abdominis	UBERON:0004511	62.43	gold quality
pigmented layer of retina	UBERON:0001782	62.05	silver quality
monocyte	CL:0000576	61.95	gold quality
lateral globus pallidus	UBERON:0002476	61.77	gold quality
deltoid	UBERON:0001476	61.36	gold quality
skin of leg	UBERON:0001511	60.72	gold quality
ileal mucosa	UBERON:0000331	60.22	silver quality
gingival epithelium	UBERON:0001949	59.79	gold quality
tibial nerve	UBERON:0001323	59.45	gold quality
nasal cavity epithelium	UBERON:0005384	59.12	gold quality
skin of abdomen	UBERON:0001416	58.94	gold quality
cartilage tissue	UBERON:0002418	58.89	gold quality
skeletal muscle tissue	UBERON:0001134	58.77	gold quality
skeletal muscle tissue of biceps brachii	UBERON:0004502	58.65	gold quality
zone of skin	UBERON:0000014	58.64	gold quality
gingiva	UBERON:0001828	57.93	gold quality
pancreatic ductal cell	CL:0002079	57.32	silver quality
bone marrow	UBERON:0002371	57.19	gold quality
lateral nuclear group of thalamus	UBERON:0002736	57.13	gold quality
cortical plate	UBERON:0005343	56.55	silver quality
myocardium	UBERON:0002349	56.15	gold quality
nasal cavity mucosa	UBERON:0001826	55.79	gold quality
ganglionic eminence	UBERON:0004023	55.06	silver quality
substantia nigra pars reticulata	UBERON:0001966	54.88	gold quality
cerebellar vermis	UBERON:0004720	54.81	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.16

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.