TRPM2
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Also known as KNP3LTRPC2NUDT9L1NUDT9HEREG1
Summary
TRPM2 (transient receptor potential cation channel subfamily M member 2, HGNC:12339) is a protein-coding gene on chromosome 21q22.3, encoding Transient receptor potential cation channel subfamily M member 2 (O94759). Nonselective, voltage-independent cation channel that mediates Na(+) and Ca(2+) influx, leading to increased cytoplasmic Ca(2+) levels.
The protein encoded by this gene forms a tetrameric cation channel that is permeable to calcium, sodium, and potassium and is regulated by free intracellular ADP-ribose. The encoded protein is activated by oxidative stress and confers susceptibility to cell death. Alternative splicing results in multiple transcript variants encoding distinct protein isoforms. Additional transcript variants of this gene have been described, but their full-length nature is not known.
Source: NCBI Gene 7226 — RefSeq curated summary.
At a glance
- GWAS associations: 7
- Clinical variants (ClinVar): 483 total
- Druggable target: yes — 5 molecules with ChEMBL bioactivity
- MANE Select transcript:
NM_003307
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:12339 |
| Approved symbol | TRPM2 |
| Name | transient receptor potential cation channel subfamily M member 2 |
| Location | 21q22.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | KNP3, LTRPC2, NUDT9L1, NUDT9H, EREG1 |
| Ensembl gene | ENSG00000142185 |
| Ensembl biotype | protein_coding |
| OMIM | 603749 |
| Entrez | 7226 |
Gene structure
Transcript identifiers
Ensembl transcripts: 8 — 6 protein_coding, 2 protein_coding_CDS_not_defined
ENST00000300481, ENST00000300482, ENST00000397928, ENST00000397932, ENST00000431901, ENST00000490982, ENST00000498430, ENST00000903457
RefSeq mRNA: 5 — MANE Select: NM_003307
NM_001320350, NM_001320351, NM_001320352, NM_001433516, NM_003307
CCDS: CCDS13710, CCDS82681
Canonical transcript exons
ENST00000397928 — 32 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001050770 | 44366754 | 44366934 |
| ENSE00001136239 | 44369177 | 44369343 |
| ENSE00001136423 | 44364114 | 44364282 |
| ENSE00001211363 | 44354648 | 44354736 |
| ENSE00001530923 | 44353621 | 44353865 |
| ENSE00003465034 | 44400259 | 44400371 |
| ENSE00003484543 | 44395414 | 44395551 |
| ENSE00003488936 | 44435131 | 44435217 |
| ENSE00003499642 | 44437062 | 44437167 |
| ENSE00003500029 | 44390904 | 44391025 |
| ENSE00003509381 | 44378997 | 44379197 |
| ENSE00003510537 | 44423645 | 44423732 |
| ENSE00003518763 | 44382718 | 44382820 |
| ENSE00003529143 | 44405905 | 44406037 |
| ENSE00003534191 | 44418423 | 44418555 |
| ENSE00003538028 | 44439067 | 44439168 |
| ENSE00003546538 | 44440789 | 44440905 |
| ENSE00003546941 | 44426660 | 44426736 |
| ENSE00003547493 | 44424852 | 44424939 |
| ENSE00003562029 | 44405142 | 44405260 |
| ENSE00003563694 | 44375833 | 44376013 |
| ENSE00003575443 | 44391272 | 44391625 |
| ENSE00003580935 | 44425670 | 44425827 |
| ENSE00003597184 | 44399296 | 44399441 |
| ENSE00003599280 | 44397747 | 44397876 |
| ENSE00003604228 | 44406594 | 44406765 |
| ENSE00003621257 | 44413891 | 44414074 |
| ENSE00003626924 | 44417927 | 44418108 |
| ENSE00003630131 | 44427010 | 44427111 |
| ENSE00003636376 | 44401681 | 44401897 |
| ENSE00003691176 | 44377712 | 44377773 |
| ENSE00003749845 | 44441692 | 44442644 |
Expression profiles
Bgee: expression breadth ubiquitous, 176 present calls, max score 89.60.
FANTOM5 (CAGE): breadth broad, TPM avg 9.0269 / max 1145.3604, expressed in 673 samples.
FANTOM5 promoters (16 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 189470 | 5.3413 | 438 |
| 189469 | 1.4536 | 335 |
| 189467 | 0.8060 | 136 |
| 189483 | 0.4226 | 120 |
| 189471 | 0.2771 | 119 |
| 189480 | 0.2528 | 32 |
| 189478 | 0.1298 | 46 |
| 189472 | 0.0979 | 25 |
| 189482 | 0.0563 | 32 |
| 189479 | 0.0370 | 25 |
Top tissues by expression
279 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| right frontal lobe | UBERON:0002810 | 89.60 | gold quality |
| caudate nucleus | UBERON:0001873 | 88.42 | gold quality |
| nucleus accumbens | UBERON:0001882 | 88.02 | gold quality |
| monocyte | CL:0000576 | 87.78 | gold quality |
| putamen | UBERON:0001874 | 87.40 | gold quality |
| mononuclear cell | CL:0000842 | 87.35 | gold quality |
| leukocyte | CL:0000738 | 86.85 | gold quality |
| cingulate cortex | UBERON:0003027 | 86.59 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 86.48 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 86.47 | gold quality |
| granulocyte | CL:0000094 | 86.04 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 86.01 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 85.07 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 84.98 | gold quality |
| cerebellar cortex | UBERON:0002129 | 84.90 | gold quality |
| prefrontal cortex | UBERON:0000451 | 84.29 | gold quality |
| spleen | UBERON:0002106 | 83.62 | gold quality |
| frontal cortex | UBERON:0001870 | 83.04 | gold quality |
| cerebellum | UBERON:0002037 | 82.92 | gold quality |
| neocortex | UBERON:0001950 | 82.80 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 82.51 | gold quality |
| telencephalon | UBERON:0001893 | 82.33 | gold quality |
| hypothalamus | UBERON:0001898 | 82.14 | gold quality |
| cerebral cortex | UBERON:0000956 | 81.58 | gold quality |
| amygdala | UBERON:0001876 | 81.17 | gold quality |
| forebrain | UBERON:0001890 | 81.13 | gold quality |
| brain | UBERON:0000955 | 80.58 | gold quality |
| central nervous system | UBERON:0001017 | 80.54 | gold quality |
| blood | UBERON:0000178 | 80.02 | gold quality |
| spinal cord | UBERON:0002240 | 79.83 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 5.90 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): E2F1
miRNA regulators (miRDB)
35 targeting TRPM2, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-1184 | 99.99 | 68.19 | 1458 |
| HSA-MIR-5195-3P | 99.92 | 70.92 | 1877 |
| HSA-MIR-3934-3P | 99.76 | 65.51 | 1351 |
| HSA-MIR-6764-5P | 99.75 | 67.89 | 2304 |
| HSA-MIR-7-5P | 99.67 | 70.53 | 1809 |
| HSA-MIR-10394-5P | 99.65 | 66.83 | 1852 |
| HSA-MIR-1205 | 99.65 | 66.76 | 1826 |
| HSA-MIR-1915-3P | 99.58 | 66.79 | 1988 |
| HSA-MIR-4441 | 99.49 | 66.56 | 3216 |
| HSA-MIR-3191-3P | 99.45 | 63.94 | 356 |
| HSA-MIR-6722-3P | 99.45 | 67.62 | 1919 |
| HSA-MIR-4685-5P | 99.25 | 65.99 | 1563 |
| HSA-MIR-6837-5P | 99.25 | 65.47 | 1632 |
| HSA-MIR-4293 | 99.22 | 65.46 | 1263 |
| HSA-MIR-6852-5P | 99.17 | 66.69 | 2073 |
| HSA-MIR-1909-3P | 99.03 | 66.56 | 1662 |
| HSA-MIR-4270 | 99.02 | 66.26 | 1987 |
| HSA-MIR-3190-5P | 98.87 | 64.89 | 1345 |
| HSA-MIR-873-5P | 98.84 | 66.90 | 1348 |
| HSA-MIR-4755-3P | 98.77 | 65.59 | 1915 |
| HSA-MIR-423-5P | 98.69 | 67.48 | 1522 |
| HSA-MIR-6840-3P | 98.68 | 65.95 | 1923 |
| HSA-MIR-3184-5P | 98.56 | 67.13 | 1491 |
| HSA-MIR-4726-3P | 98.49 | 63.89 | 1385 |
| HSA-MIR-6810-5P | 98.29 | 66.21 | 975 |
| HSA-MIR-7113-5P | 97.88 | 67.33 | 1735 |
| HSA-MIR-4433A-3P | 97.75 | 62.82 | 1435 |
| HSA-MIR-8089 | 97.74 | 66.21 | 1698 |
| HSA-MIR-1972 | 97.67 | 67.38 | 1172 |
| HSA-MIR-558 | 97.50 | 67.16 | 977 |
Literature-anchored findings (GeneRIF, showing 40)
- LTRPC2 represents an important intrinsic mechanism that mediates Ca2+ and Na+ overload in response to disturbance of redox state in cell death (PMID:11804595)
- channel acitvation is dependent on criticial intracellular Ca2+ (PMID:12529379)
- evidence of role in neutrophil granulocytes by forming an entry pathway for Na(+) and Ca(2+), which is regulated by ADP-ribose and the redox state (PMID:12564954)
- TRPM2-S is an important physiologic isoform of TRPM2 and modulates channel activity and induction of cell death by oxidative stress through TRPM2-L. (PMID:12594222)
- oxidative and nitrosative stress induces TRPM2 activation in which mitochondria are induced to produce free ADP-ribose and release it to the cytosol, where its subsequent accumulation induces TRPM2 gating (PMID:15561722)
- The SSF-TRPM2 protein still maintained H2(O2)-induced Ca2+ influx activity. In addition, we found that the major transcripts in human and mouse start from a novel 5’ non-coding exon; we could not detect any striatum short transcript in mouse brain. (PMID:15708008)
- TRPM2 is a coincidence detector for adenosine diphosphatae ribose and cyclic adp ribose signaling. (PMID:15808509)
- LTRPC2 protein is a likely component of the calcium release activated nonselective cation channel in lymphocytes (PMID:16075382)
- Findings suggest genetic variants of the TRPM2 gene increase risk for BD and support the notion that TRPM2 may be involved in the pathophysiology of bipolar disorder. (PMID:16252251)
- Data show that one mechanism through which oxidative stress or TNF-alpha mediates cell death is activation of TRPM2, resulting in increased internal calcium, followed by caspase activation and PARP cleavage. (PMID:16306129)
- gene silencing of TRPM2 abolished the adenosine diphosphoribose - and ConA-mediated inward current. (PMID:16316998)
- data demonstrate the requirement for CaM in TRPM2 activation; they suggest that Ca(2+) entering through TRPM2 enhances interaction of CaM with TRPM2 at the IQ-like motif in the N terminus, providing crucial positive feedback for channel activation (PMID:16461353)
- a SIR2 reaction metabolite modulates TRPM2 ion channel (PMID:16565078)
- Cyclic ADP-ribose and NAADP strongly activate natively expressed TRPM2 chanels in Jurkat T cells. (PMID:16585058)
- TRPM2 is a potential molecular target for cADPR, which regulates Ca(2+) entry into pancreatic beta-cells at body temperature depending on the production of cADPR-related molecules, thereby regulating insulin secretion. (PMID:16601673)
- ADP-ribose and Ca2+ in concert behave as a messenger system for agonist-induced influx of Ca2+ through TRPM2 in granulocytes (PMID:16719842)
- Screening of bipolar affective disorder patients for mutations in TRPM2 led to identification of three novel and four known transitions, indicating TRPM2 as a candidate gene of bipolar affective disorder. (PMID:16733555)
- detailed expression profile of TRPM2 mRNA within the central nervous system (PMID:16777714)
- These results taken together suggest that the cysteine residues in the pore region are obligatory for TRPM2 channel function. (PMID:16822940)
- examined role of a coiled-coil domain in the intracellular C terminus of TRPM2 subunit in subunit interaction and channel assembly (PMID:17060318)
- in light of the wide-spread expression and growing list of cellular functions of TRPM2, useful therapeutic applications are expected for future drugs that block TRPM2 channels or inhibit their activation–{REVIEW} (PMID:17217061)
- Tyrosine phosphorylation of TRPM2 by PTPL1 controls activation/function. (PMID:17251321)
- the transmembrane segment S6 has a role in determining cation versus anion selectivity of TRPM2 and TRPM8 (PMID:17604279)
- TRPM2 agonist-binding ADPRase domain and the ion gate in the transmembrane region are separately located in the molecule. (PMID:17940282)
- TRPM2 mediates H2O2-induced increase in endothelial permeability through the activation of Ca2+ entry via TRPM2. (PMID:18048770)
- TRPM2-mediated Ca2+influx induces chemokine production in monocytes that aggravates inflammatory neutrophil infiltration. (PMID:18542050)
- The regulation of TRPM2 activation in human neutrophils, is characterized. (PMID:18572241)
- during conditions of oxidative stress in lymphocytes, TRPM2 acts as a downstream effector of the PARP/poly(ADP-ribose) glycohydrolase pathway through PARP-dependent formation of ADP-ribose. (PMID:18599483)
- that Glu-960, Gln-981, Asp-987, and Glu-1022 residues are engaged in determining divalent cationic permeation properties of the TRPM2 channel. (PMID:18687688)
- Study describes the computational identification of a melanoma-enriched antisense transcript, TRPM2-AS, mapped within the locus of TRPM2, an ion channel capable of mediating susceptibility to cell death (PMID:18957938)
- A variant of the transient receptor potential melastatin 2 (TRPM2) gene may confer susceptibility to parkinsonism-dementia and amyotrophic lateral sclerosis. (PMID:19004782)
- This study supports a role for TRPM2 in the pathogenesis of bipolar disorder and the G allele of rs1556314 at exon 11 of TRPM2 in BD-I but not bipolar disorder type II (BD-II). (PMID:19133961)
- functional TRPM2 channels mediate H(2)O(2)-induced Ca(2+) entry in beta-cells, a process potently inhibited by N-(p-amylcinnamoyl)anthranilic acid (PMID:19382906)
- Data show that TRPM2 and ADPR represent multimodal signaling elements regulating Ca2+ mobilization in beta cells through membrane depolarization, Ca2+ influx, and release of Ca2+ from intracellular stores. (PMID:19454650)
- These results collectively suggest the requirement for the N-terminal CC domain for protein expression and function, but not subunit interaction, of the TRPM2 channel. (PMID:19652898)
- Its activation by oxidative stress leads to chemokine production in macrophage, which causes chronic inflammation. (review) (PMID:19749482)
- [REVIEW] TRPM1 and TRPM2, are localized in intracellular compartments and are involved in melanin synthesis and oxidative stress-induced cell death (PMID:19887679)
- TRPM2 is essential for prostate cancer cell proliferation and may be a potential target for the selective treatment of prostate cancer. (PMID:20029400)
- Data demonstrate that TRPM2 is required for the LPS-induced production of IL-6, IL-8, IL-10, and TNF-alpha. (PMID:20107186)
- The calcium-permeable non-selective cation channel TRPM2 is modulated by cellular acidification. (PMID:20194125)
Cross-species orthologs
7 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | trpm2 | ENSDARG00000101641 |
| mus_musculus | Trpm2 | ENSMUSG00000009292 |
| rattus_norvegicus | Trpm2 | ENSRNOG00000001216 |
| caenorhabditis_elegans | WBGENE00004149 | |
| caenorhabditis_elegans | WBGENE00020972 | |
| caenorhabditis_elegans | WBGENE00021404 | |
| caenorhabditis_elegans | WBGENE00021408 |
Paralogs (7): TRPM5 (ENSG00000070985), TRPM3 (ENSG00000083067), TRPM7 (ENSG00000092439), TRPM6 (ENSG00000119121), TRPM4 (ENSG00000130529), TRPM1 (ENSG00000134160), TRPM8 (ENSG00000144481)
Protein
Protein identifiers
Transient receptor potential cation channel subfamily M member 2 — O94759 (reviewed: O94759)
Alternative names: Estrogen-responsive element-associated gene 1 protein, Long transient receptor potential channel 2, Transient receptor potential channel 7, Transient receptor potential melastatin 2
All UniProt accessions (3): O94759, C9JZQ8, E9PGK7
UniProt curated annotations — full annotation on UniProt →
Function. Nonselective, voltage-independent cation channel that mediates Na(+) and Ca(2+) influx, leading to increased cytoplasmic Ca(2+) levels. Functions as a ligand-gated ion channel, gated by intracellular adenosine diphosphate ribose (ADP-ribose), Ca(2+), warm temperature, and oxidative stress. The precise physiological activators are under debate; the true, physiological activators may be ADP-ribose and ADP-ribose-2’-phosphate. Binding of ADP-ribose to the cytoplasmic Nudix domain causes a conformation change; the channel is primed but still requires Ca(2+) binding to trigger channel opening. Extracellular Ca(2+) passes through the channel and increases channel activity. Contributes to Ca(2+) release from intracellular stores in response to ADP-ribose. Plays a role in numerous processes that involve signaling via intracellular Ca(2+) levels. Besides, mediates the release of lysosomal Zn(2+) stores in response to reactive oxygen species, leading to increased cytosolic Zn(2+) levels. Plays a role in mediating behavorial and physiological responses to moderate heat and thereby contributes to body temperature homeostasis. Plays a role in insulin secretion, a process that requires increased cytoplasmic Ca(2+) levels. Required for normal IFNG and cytokine secretion and normal innate immune immunity in response to bacterial infection. Required for normal phagocytosis and cytokine release by macrophages exposed to zymosan (in vitro). Plays a role in dendritic cell differentiation and maturation, and in dendritic cell chemotaxis via its role in regulating cytoplasmic Ca(2+) levels. Plays a role in the regulation of the reorganization of the actin cytoskeleton and filopodia formation in response to reactive oxygen species via its role in increasing cytoplasmic Ca(2+) and Zn(2+) levels. Confers susceptibility to cell death following oxidative stress. Lacks cation channel activity. Does not mediate cation transport in response to oxidative stress or ADP-ribose. Lacks cation channel activity and negatively regulates the channel activity of isoform 1. Negatively regulates susceptibility to cell death in reposponse to oxidative stress.
Subunit / interactions. Homotetramer. Isoform 1 can interact with isoform 3. This interaction decreases Ca(2+) influx through isoform 1 and suppresses susceptibility to oxidative stress-induced cell death.
Subcellular location. Cell membrane. Perikaryon. Cell projection. Cytoplasmic vesicle. Lysosome Cell membrane Cell membrane Cell membrane.
Tissue specificity. Highly expressed in brain and peripheral blood cells, such as neutrophils. Also detected in bone marrow, spleen, heart, liver and lung. Isoform 2 is found in neutrophil granulocytes.
Post-translational modifications. Phosphorylation of TRPM2 at Thr-740 by protein kinase C (PKC) counteracts the effect of cytosolic Ca(2+) and elevates the temperature threshold.
Activity regulation. Activated by intracellular ADP-ribose, beta-NAD (NAD(+)) and similar compounds, and by oxidative stress caused by reactive oxygen or nitrogen species. Ca(2+) and PI(4,5)P2 are required for channel opening by ADP-ribose. Activation by ADP-ribose and beta-NAD is strongly increased by moderate heat (35 to 40 degrees Celsius). Likewise, reactive oxygen species lower the threshold for activation by moderate heat (37 degrees Celsius). Activated by moderate heat (35 to 40 degrees Celsius). Inactivated by exposure to extracellular pH between 4.0 and 6.5; irreversibly inactivated when open channels are exposed to extracellular pH between 4.0 and 6.5, while pre-exposure of closed channels to extracellular pH 5.5 gives rise to currents that rapidly inactivate, but protects against irreversible inactivation. Inactivated by intracellular ATP. Activated by arachidonic acid. Inhibited by 2-aminoethyl diphenylborinate (2-APB).
Domain organisation. Contains two binding sites for ADP-ribose, one in the N-terminal part of the channel and the other in the C-terminal nudix hydrolase domain. Both sites seem to have a role in channel opening, but the interaction of ADP-ribose with the N-terminal site is absolutely required for channel activation.
Similarity. Belongs to the transient receptor (TC 1.A.4) family. LTrpC subfamily. TRPM2 sub-subfamily.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| O94759-1 | 1, TRPM2-L | yes |
| O94759-2 | 2 | |
| O94759-3 | 3, TRPM2-S |
RefSeq proteins (4): NP_001307279, NP_001307280, NP_001420445, NP_003298* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000086 | NUDIX_hydrolase_dom | Domain |
| IPR005821 | Ion_trans_dom | Domain |
| IPR015797 | NUDIX_hydrolase-like_dom_sf | Homologous_superfamily |
| IPR041491 | TRPM_SLOG | Domain |
| IPR050927 | TRPM | Family |
| IPR057366 | TRPM-like | Domain |
Pfam: PF00520, PF18139, PF25508, PF25969
Catalyzed reactions (Rhea), 2 shown:
- Ca(2+)(in) = Ca(2+)(out) (RHEA:29671)
- Na(+)(in) = Na(+)(out) (RHEA:34963)
UniProt features (226 total): helix 59, strand 51, mutagenesis site 32, turn 25, binding site 15, sequence variant 13, topological domain 10, transmembrane region 6, intramembrane region 3, splice variant 3, region of interest 2, short sequence motif 2, chain 1, domain 1, modified residue 1, disulfide bond 1, sequence conflict 1
Structure
Experimental structures (PDB)
15 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 8E6U | ELECTRON MICROSCOPY | 3.2 |
| 6PUO | ELECTRON MICROSCOPY | 3.3 |
| 8E6V | ELECTRON MICROSCOPY | 3.3 |
| 8E6Q | ELECTRON MICROSCOPY | 3.4 |
| 6MIX | ELECTRON MICROSCOPY | 3.6 |
| 7VQ2 | ELECTRON MICROSCOPY | 3.68 |
| 6PUS | ELECTRON MICROSCOPY | 3.7 |
| 6PUU | ELECTRON MICROSCOPY | 3.7 |
| 8E6T | ELECTRON MICROSCOPY | 3.7 |
| 7VQ1 | ELECTRON MICROSCOPY | 3.76 |
| 6PUR | ELECTRON MICROSCOPY | 4.4 |
| 8E6S | ELECTRON MICROSCOPY | 4.6 |
| 8E6R | ELECTRON MICROSCOPY | 5.6 |
| 6MIZ | ELECTRON MICROSCOPY | 6.1 |
| 6MJ2 | ELECTRON MICROSCOPY | 6.36 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-O94759-F1 | 78.51 | 0.21 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (15): 174; 179; 302; 333; 336; 843; 846; 869; 1073; 1381; 1382; 1431 …
Post-translational modifications (1): 740
Disulfide bonds (1): 996–1008
Mutagenesis-validated functional residues (32):
| Position | Phenotype |
|---|---|
| 215 | abolishes lowering of temperature threshold for activation in response to reactive oxygen species. abolishes channel act |
| 295 | abolishes channel activation in response to adp-ribose/ca(2+). |
| 302 | no significant effect on channel activity; when associated with a-358. abolishes channel activation in response to adp-r |
| 358 | no significant effect on channel activity; when associated with a-302. |
| 918 | decreases in sensitivity to pip2. |
| 952 | strongly reduces channel activity at ph 7.3. increased residual channel activity after exposure to ph 5.5. |
| 958 | no effect on channel activity. |
| 961 | mildly decreases channel activity. |
| 962 | abolishes channel activity. |
| 968 | abolishes channel activity. |
| 973 | no effect on channel activity. |
| 980 | decreases permeability of ca(2+) over na(+). |
| 981 | increases the permeability of ca(2+) over na(+). |
| 982 | alters the reversal potential. increases the permeability of ca(2+) over na(+). |
| 982 | no change in the reversal potential. no change in the ion selectivity to ca(2+) over na(+). |
| 984–985 | prevents fast inactivation of the channel. |
| 984 | no change in the reversal potential. no change in the ion selectivity to ca(2+) over na(+). |
| 985 | no change in the reversal potential. no change in the ion selectivity to ca(2+) over na(+). |
| 995 | moderately decreases channel activity. |
| 1002 | strongly increased residual channel activity after exposure to ph 5.5. |
| 1005 | decreases channel activity. |
| 1007 | nearly abolishes channel activity. |
| 1077 | decreases in sensitivity to pip2. |
| 1228–1503 | loss of channel activity. |
| 1397 | only slight effect on activity. |
Function
Pathways and Gene Ontology
Reactome pathways
2 pathways
| ID | Pathway |
|---|---|
| R-HSA-3295583 | TRP channels |
| R-HSA-6798695 | Neutrophil degranulation |
MSigDB gene sets: 87 (showing top):
GOBP_SINGLE_FERTILIZATION, GOBP_TRANSITION_METAL_ION_TRANSPORT, REACTOME_PLATELET_ACTIVATION_SIGNALING_AND_AGGREGATION, GGGTGGRR_PAX4_03, GOBP_MONOATOMIC_CATION_TRANSPORT, REACTOME_EFFECTS_OF_PIP2_HYDROLYSIS, GOBP_REGULATION_OF_CYTOSOLIC_CALCIUM_ION_CONCENTRATION, GOBP_MONOATOMIC_ION_HOMEOSTASIS, GOBP_FERTILIZATION, GOBP_CALCIUM_ION_TRANSMEMBRANE_TRANSPORT, ACEVEDO_METHYLATED_IN_LIVER_CANCER_DN, GOBP_TRANSMEMBRANE_TRANSPORT, GOCC_NUCLEAR_ENVELOPE, chr5q31, GOBP_HOMEOSTATIC_PROCESS
GO Biological Process (26): temperature homeostasis (GO:0001659), dendritic cell chemotaxis (GO:0002407), calcium ion transport (GO:0006816), response to heat (GO:0009408), response to purine-containing compound (GO:0014074), regulation of actin cytoskeleton organization (GO:0032956), response to hydroperoxide (GO:0033194), release of sequestered calcium ion into cytosol (GO:0051209), protein homotetramerization (GO:0051289), regulation of filopodium assembly (GO:0051489), cellular response to hydrogen peroxide (GO:0070301), calcium ion transmembrane transport (GO:0070588), cellular response to calcium ion (GO:0071277), cellular response to temperature stimulus (GO:0071502), zinc ion transmembrane transport (GO:0071577), dendritic cell differentiation (GO:0097028), calcium ion transmembrane import into cytosol (GO:0097553), calcium ion import across plasma membrane (GO:0098703), monoatomic ion transport (GO:0006811), sodium ion transport (GO:0006814), manganese ion transport (GO:0006828), calcium-mediated signaling (GO:0019722), monoatomic ion transmembrane transport (GO:0034220), sodium ion transmembrane transport (GO:0035725), transmembrane transport (GO:0055085), manganese ion transmembrane transport (GO:0071421)
GO Molecular Function (11): monoatomic cation channel activity (GO:0005261), calcium channel activity (GO:0005262), sodium channel activity (GO:0005272), manganese ion transmembrane transporter activity (GO:0005384), calcium ion binding (GO:0005509), intracellularly gated calcium channel activity (GO:0015278), mono-ADP-D-ribose binding (GO:0072571), ligand-gated calcium channel activity (GO:0099604), monoatomic ion channel activity (GO:0005216), metal ion binding (GO:0046872), metal ion transmembrane transporter activity (GO:0046873)
GO Cellular Component (11): lysosome (GO:0005764), lysosomal membrane (GO:0005765), plasma membrane (GO:0005886), cytoplasmic vesicle membrane (GO:0030659), specific granule membrane (GO:0035579), cell projection (GO:0042995), perikaryon (GO:0043204), tertiary granule membrane (GO:0070821), ficolin-1-rich granule membrane (GO:0101003), membrane (GO:0016020), cytoplasmic vesicle (GO:0031410)
Reactome top-level categories
Rollup of top-2 pathways:
| Category | Pathways |
|---|---|
| Stimuli-sensing channels | 1 |
| Innate Immune System | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| metal ion transport | 3 |
| secretory granule membrane | 3 |
| cellular anatomical structure | 3 |
| response to temperature stimulus | 2 |
| calcium ion transmembrane import into cytosol | 2 |
| monoatomic cation transmembrane transport | 2 |
| monoatomic cation transmembrane transporter activity | 2 |
| monoatomic cation channel activity | 2 |
| tertiary granule | 2 |
| multicellular organismal-level homeostasis | 1 |
| leukocyte chemotaxis | 1 |
| dendritic cell migration | 1 |
| response to stress | 1 |
| response to nitrogen compound | 1 |
| actin cytoskeleton organization | 1 |
| regulation of actin filament-based process | 1 |
| regulation of cytoskeleton organization | 1 |
| response to oxidative stress | 1 |
| response to oxygen-containing compound | 1 |
| intercellular transport | 1 |
| protein homooligomerization | 1 |
| protein tetramerization | 1 |
| filopodium assembly | 1 |
| regulation of plasma membrane bounded cell projection assembly | 1 |
| cellular response to reactive oxygen species | 1 |
| response to hydrogen peroxide | 1 |
| calcium ion transport | 1 |
| response to calcium ion | 1 |
| cellular response to metal ion | 1 |
| zinc ion transport | 1 |
| mononuclear cell differentiation | 1 |
| calcium ion transmembrane transport | 1 |
| calcium ion import | 1 |
| inorganic cation import across plasma membrane | 1 |
| calcium ion import into cytosol | 1 |
| transport | 1 |
| monoatomic ion channel activity | 1 |
| calcium ion transmembrane transporter activity | 1 |
| sodium ion transmembrane transporter activity | 1 |
| transition metal ion transmembrane transporter activity | 1 |
Protein interactions and networks
STRING
656 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| TRPM2 | TRPV1 | Q8NER1 | 782 |
| TRPM2 | STIM1 | Q13586 | 729 |
| TRPM2 | ORAI1 | Q96D31 | 701 |
| TRPM2 | STIM2 | Q9P246 | 671 |
| TRPM2 | PARG | Q86W56 | 669 |
| TRPM2 | ORAI3 | Q9BRQ5 | 665 |
| TRPM2 | ORAI2 | Q96SN7 | 663 |
| TRPM2 | TRPC6 | Q9Y210 | 656 |
| TRPM2 | RNF24 | Q9Y225 | 650 |
| TRPM2 | TRPV2 | Q9Y5S1 | 640 |
| TRPM2 | ANK1 | P16157 | 626 |
| TRPM2 | PKD2L2 | Q9NZM6 | 612 |
| TRPM2 | TRPA1 | O75762 | 610 |
| TRPM2 | ANK3 | Q12955 | 610 |
| TRPM2 | ANK2 | Q01484 | 610 |
IntAct
3 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| TRPM2 | TRPM2 | psi-mi:“MI:0407”(direct interaction) | 0.360 |
| PPP1R12A | TRPM2 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (15): TRPM2 (Affinity Capture-RNA), TRPM2 (Affinity Capture-MS), EFHC1 (Affinity Capture-Western), TRPM2 (Reconstituted Complex), TRPM2 (Affinity Capture-Western), TRIM21 (Affinity Capture-Western), TRPM2 (Affinity Capture-MS), TRPM2 (Affinity Capture-MS), EPPK1 (Cross-Linking-MS (XL-MS)), TRPM2 (Cross-Linking-MS (XL-MS)), TRPM2 (Co-fractionation), TRPM2 (Co-fractionation), TRPM2 (Co-fractionation), TRPM2 (Co-fractionation), TRPM2 (Affinity Capture-RNA)
ESM2 similar proteins: A0A5B9, A6NDV4, A6QLK4, B1AWJ5, E9PTA2, O75051, O94759, P01850, P01851, P01852, P01857, P01859, P01860, P01861, P01869, P01870, P01906, P01909, P03987, P06333, P0DSE2, P0DTU4, P11364, P15151, P15981, P20759, P20762, P32506, P54900, Q1WIM1, Q1WIM3, Q3TMX7, Q6P767, Q6ZRP7, Q7TQ33, Q812F8, Q8N126, Q8NFZ8, Q8R143, Q8R464
Diamond homologs: A0A0R4IMY7, A7T1N0, A8DYE2, E9PTA2, J9SQF3, O94759, Q2TV84, Q2WEA5, Q5XIG0, Q7TN37, Q7Z2W7, Q7Z4N2, Q8BVU5, Q8R455, Q8R4D5, Q8TD43, Q91YD4, Q9BW91, Q9ESQ5, Q9HCF6, Q9JJH7, Q9NZQ8, S5UH55, Q09297, Q8CIR4, Q923J1, Q925B3, Q96QT4, Q9BX84, Q93971
SIGNOR signaling
1 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| PRKCA | “up-regulates activity” | TRPM2 | phosphorylation |
Disease & clinical
Clinical variants and AI predictions
ClinVar
483 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 349 |
| Likely benign | 37 |
| Benign | 47 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
9846 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 21:44350274:AGGTA:A | donor_loss | 1.0000 |
| 21:44354646:A:AG | acceptor_gain | 1.0000 |
| 21:44354647:G:GG | acceptor_gain | 1.0000 |
| 21:44364110:GCA:G | acceptor_loss | 1.0000 |
| 21:44364111:CAG:C | acceptor_loss | 1.0000 |
| 21:44366094:G:T | donor_gain | 1.0000 |
| 21:44366095:A:T | donor_gain | 1.0000 |
| 21:44366749:C:A | acceptor_gain | 1.0000 |
| 21:44366751:CAG:C | acceptor_loss | 1.0000 |
| 21:44366752:A:AG | acceptor_gain | 1.0000 |
| 21:44366752:A:C | acceptor_loss | 1.0000 |
| 21:44366752:AGTAC:A | acceptor_gain | 1.0000 |
| 21:44366753:G:GT | acceptor_gain | 1.0000 |
| 21:44366753:GT:G | acceptor_gain | 1.0000 |
| 21:44366753:GTAC:G | acceptor_gain | 1.0000 |
| 21:44366753:GTACG:G | acceptor_gain | 1.0000 |
| 21:44366931:ACAG:A | donor_loss | 1.0000 |
| 21:44366932:CAG:C | donor_loss | 1.0000 |
| 21:44366933:AG:A | donor_loss | 1.0000 |
| 21:44366936:T:A | donor_loss | 1.0000 |
| 21:44376005:A:T | donor_gain | 1.0000 |
| 21:44376011:G:GT | donor_gain | 1.0000 |
| 21:44377709:TAG:T | acceptor_loss | 1.0000 |
| 21:44377710:AGG:A | acceptor_loss | 1.0000 |
| 21:44377711:G:T | acceptor_loss | 1.0000 |
| 21:44377711:GGT:G | acceptor_gain | 1.0000 |
| 21:44377770:GCAC:G | donor_gain | 1.0000 |
| 21:44377773:CG:C | donor_loss | 1.0000 |
| 21:44377774:G:GG | donor_gain | 1.0000 |
| 21:44377775:T:A | donor_loss | 1.0000 |
AlphaMissense
9917 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 21:44414056:T:C | L1043P | 0.999 |
| 21:44369182:T:A | W204R | 0.998 |
| 21:44369182:T:C | W204R | 0.998 |
| 21:44414054:C:A | N1042K | 0.998 |
| 21:44414054:C:G | N1042K | 0.998 |
| 21:44417967:T:A | W1063R | 0.998 |
| 21:44417967:T:C | W1063R | 0.998 |
| 21:44406037:G:A | M930I | 0.997 |
| 21:44406037:G:C | M930I | 0.997 |
| 21:44406037:G:T | M930I | 0.997 |
| 21:44406633:T:A | W944R | 0.997 |
| 21:44406633:T:C | W944R | 0.997 |
| 21:44406663:G:C | A954P | 0.997 |
| 21:44417934:T:C | F1052L | 0.997 |
| 21:44417936:C:A | F1052L | 0.997 |
| 21:44417936:C:G | F1052L | 0.997 |
| 21:44417969:G:C | W1063C | 0.997 |
| 21:44417969:G:T | W1063C | 0.997 |
| 21:44390969:T:A | W462R | 0.996 |
| 21:44390969:T:C | W462R | 0.996 |
| 21:44390988:C:A | A468D | 0.996 |
| 21:44395501:T:A | W628R | 0.996 |
| 21:44395501:T:C | W628R | 0.996 |
| 21:44406738:T:C | F979L | 0.996 |
| 21:44406740:C:A | F979L | 0.996 |
| 21:44406740:C:G | F979L | 0.996 |
| 21:44413914:T:A | C996S | 0.996 |
| 21:44413915:G:C | C996S | 0.996 |
| 21:44417980:G:C | R1067P | 0.996 |
| 21:44390976:G:C | R464P | 0.995 |
dbSNP variants (sampled 300 via entrez): RS1000000320 (21:44435234 C>T), RS1000028365 (21:44362057 G>A,T), RS1000082273 (21:44434317 G>A), RS1000133480 (21:44428058 C>G), RS1000176336 (21:44415956 G>A), RS1000224832 (21:44381804 G>A), RS1000263579 (21:44413656 C>T), RS1000278629 (21:44381624 G>A), RS1000285585 (21:44380102 C>T), RS1000331617 (21:44418953 C>T), RS1000334874 (21:44377384 G>A), RS1000378641 (21:44413456 T>C), RS1000421945 (21:44428235 T>A), RS1000448634 (21:44409517 C>T), RS1000475714 (21:44363498 C>T)
Disease associations
OMIM: gene MIM:603749 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
7 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST003672_11 | Docetaxel-induced peripheral neuropathy in metastatic castrate-resistant prostate cancer | 9.000000e-06 |
| GCST007559_10 | Sleep duration (short sleep) | 8.000000e-10 |
| GCST009267_16 | Dental caries (decayed, missing and filled teeth) | 4.000000e-06 |
| GCST009531_11 | Body fat percentage | 4.000000e-08 |
| GCST010206_3 | Anorectal malformation | 6.000000e-17 |
| GCST010991_49 | Parkinson’s disease | 9.000000e-08 |
| GCST012438_1 | Interleukin-6 levels in non-alcoholic fatty liver disease x mastiha supplementation interaction | 8.000000e-09 |
EFO canonical traits (3, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0007800 | body fat percentage |
| EFO:0004810 | interleukin-6 measurement |
| EFO:0600067 | mastiha supplement exposure measurement |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL1250402 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
5 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 281,251 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL104 | CLOTRIMAZOLE | 4 | 56,325 |
| CHEMBL55643 | COPPER | 4 | |
| CHEMBL752 | ADENOSINE PHOSPHATE | 4 | 165,316 |
| CHEMBL808 | ECONAZOLE | 4 | 24,813 |
| CHEMBL23588 | FLUFENAMIC ACID | 2 | 34,797 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: vgic — Transient Receptor Potential channels (TRP)
Most potent curated ligand interactions (8 total), top 8:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| tatM2NX | Antagonist | 6.4 | pIC50 |
| 2-APB | Antagonist | 6.1 | pIC50 |
| Zn2+ | Channel blocker | 6.0 | pIC50 |
| ACAA | Antagonist | 5.8 | pIC50 |
| cADPR | Agonist | 5.0 | pEC50 |
| ADP ribose | Agonist | 4.4 | pEC50 |
| OAADPR | Activation | 4.0 | pKd |
| NAADP | Agonist | 3.1 | pEC50 |
ChEMBL bioactivities
39 potent at pChembl≥5 of 53 total, top 32 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 7.89 | IC50 | 13 | nM | CHEMBL4878260 |
| 7.60 | IC50 | 25 | nM | CHEMBL4161122 |
| 6.68 | IC50 | 210 | nM | SCALARADIAL |
| 6.50 | IC50 | 320 | nM | CHEMBL173443 |
| 6.40 | IC50 | 398 | nM | CHEMBL4863360 |
| 6.39 | IC50 | 410 | nM | CHEMBL4864346 |
| 6.33 | IC50 | 467 | nM | CHEMBL4856222 |
| 6.22 | IC50 | 600 | nM | CHEMBL127336 |
| 6.10 | IC50 | 788 | nM | CHEMBL4863549 |
| 6.08 | IC50 | 830 | nM | CHEMBL4849043 |
| 6.01 | IC50 | 987 | nM | CHEMBL4856093 |
| 6.00 | IC50 | 1000 | nM | CHEMBL169233 |
| 5.92 | IC50 | 1200 | nM | CHEMBL169233 |
| 5.77 | IC50 | 1700 | nM | CHEMBL173443 |
| 5.64 | IC50 | 2290 | nM | CHEMBL6151257 |
| 5.59 | IC50 | 2560 | nM | CHEMBL176974 |
| 5.58 | IC50 | 2600 | nM | COPPER |
| 5.55 | IC50 | 2800 | nM | CHEMBL6174866 |
| 5.54 | IC50 | 2890 | nM | CHEMBL6148339 |
| 5.52 | IC50 | 3000 | nM | CHEMBL3110206 |
| 5.52 | IC50 | 3000 | nM | ECONAZOLE |
| 5.52 | IC50 | 3000 | nM | CLOTRIMAZOLE |
| 5.51 | IC50 | 3080 | nM | CHEMBL6174567 |
| 5.48 | IC50 | 3280 | nM | CHEMBL6164834 |
| 5.43 | IC50 | 3700 | nM | CHEMBL4176916 |
| 5.40 | IC50 | 4000 | nM | CHEMBL4159037 |
| 5.35 | IC50 | 4500 | nM | CHEMBL173443 |
| 5.34 | IC50 | 4600 | nM | CHEMBL4174768 |
| 5.30 | IC50 | 5000 | nM | CHEMBL169233 |
| 5.29 | IC50 | 5100 | nM | CHEMBL4167784 |
| 5.21 | IC50 | 6200 | nM | CHEMBL4872096 |
| 5.09 | IC50 | 8100 | nM | CHEMBL4873412 |
PubChem BioAssay actives
35 with measured affinity, of 365 total; 22 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| ethyl 2-[3-[4-(trifluoromethyl)phenyl]-5,6,7,8-tetrahydro-4H-cyclohepta[d]pyrazol-1-yl]acetate | 1775860: Inhibition of human TRPM2 expressed in HEK293T cells assessed as blocked of ADPR-activated current by whole cell patch clamp electrophysiology | ic50 | 0.0130 | uM |
| 2-(dimethylamino)-N-(6-oxo-5H-phenanthridin-2-yl)acetamide;hydrate;hydrochloride | 1503196: Inhibition of human FLAG-tagged TRPM2 expressed in HEK293 cells assessed as reduction in H2O2-induced intracellular calcium flux pretreated for 30 secs followed by H2O2 addition measured for 120 secs by Fluo4-AM dye based fluorescence assay | ic50 | 0.0250 | uM |
| [(4aS,4bR,6S,6aS,7R,10aS,10bR,12aS)-7,8-diformyl-1,1,4a,6a,10b-pentamethyl-2,3,4,4b,5,6,7,10,10a,11,12,12a-dodecahydrochrysen-6-yl] acetate | 1503188: Inhibition of human FLAG-tagged TRPM2 expressed in HEK293 cells assessed as reduction in ADPR-induced intracellular calcium flux after 30 to 60 mins by whole cell patch clamp electrophysiology method | ic50 | 0.2100 | uM |
| 2-[[(E)-3-(4-pentylphenyl)prop-2-enoyl]amino]benzoic acid | 1359285: Inhibition of human TRPM2 expressed in HEK293 cells assessed as reduction in ADPR-induced channel currents treated extracellularly after 60 secs by whole cell patch clamp electrophysiology method | ic50 | 0.3200 | uM |
| 2-[[(E)-3-[4-(3-nitrophenyl)phenyl]prop-2-enoyl]amino]benzoic acid | 1775860: Inhibition of human TRPM2 expressed in HEK293T cells assessed as blocked of ADPR-activated current by whole cell patch clamp electrophysiology | ic50 | 0.3980 | uM |
| 5-bromo-2-[[(E)-3-(4-phenylphenyl)prop-2-enoyl]amino]benzoic acid | 1775860: Inhibition of human TRPM2 expressed in HEK293T cells assessed as blocked of ADPR-activated current by whole cell patch clamp electrophysiology | ic50 | 0.4100 | uM |
| 4-methyl-2-[[(E)-3-(4-pentylphenyl)prop-2-enoyl]amino]benzoic acid | 1775860: Inhibition of human TRPM2 expressed in HEK293T cells assessed as blocked of ADPR-activated current by whole cell patch clamp electrophysiology | ic50 | 0.4670 | uM |
| 5-(4-piperidin-1-ylbutoxy)-3,4-dihydro-2H-isoquinolin-1-one | 1503196: Inhibition of human FLAG-tagged TRPM2 expressed in HEK293 cells assessed as reduction in H2O2-induced intracellular calcium flux pretreated for 30 secs followed by H2O2 addition measured for 120 secs by Fluo4-AM dye based fluorescence assay | ic50 | 0.6000 | uM |
| 2-[[(E)-3-[4-[3-(trifluoromethyl)phenyl]phenyl]prop-2-enoyl]amino]benzoic acid | 1775860: Inhibition of human TRPM2 expressed in HEK293T cells assessed as blocked of ADPR-activated current by whole cell patch clamp electrophysiology | ic50 | 0.7880 | uM |
| 2-[[(E)-3-[4-(3-fluorophenyl)phenyl]prop-2-enoyl]amino]benzoic acid | 1775860: Inhibition of human TRPM2 expressed in HEK293T cells assessed as blocked of ADPR-activated current by whole cell patch clamp electrophysiology | ic50 | 0.8300 | uM |
| 5-methyl-2-[[(E)-3-(4-pentylphenyl)prop-2-enoyl]amino]benzoic acid | 1775860: Inhibition of human TRPM2 expressed in HEK293T cells assessed as blocked of ADPR-activated current by whole cell patch clamp electrophysiology | ic50 | 0.9870 | uM |
| 2-diphenylboranyloxyethanamine | 1065919: Inhibition of human TRPM2 expressed in HEK293 cells | ic50 | 1.0000 | uM |
| 2-[[(E)-3-(4-phenylphenyl)prop-2-enoyl]amino]benzoic acid | 1775860: Inhibition of human TRPM2 expressed in HEK293T cells assessed as blocked of ADPR-activated current by whole cell patch clamp electrophysiology | ic50 | 2.5600 | uM |
| Clotrimazole | 1065914: Inhibition of TRPM2 (unknown origin) | ic50 | 3.0000 | uM |
| Econazole | 1065914: Inhibition of TRPM2 (unknown origin) | ic50 | 3.0000 | uM |
| [[(2R,3S,5R)-5-(6-amino-8-phenylpurin-9-yl)-3-hydroxyoxolan-2-yl]methoxy-hydroxyphosphoryl] [(2R,3S,4R)-3,4,5-trihydroxyoxolan-2-yl]methyl hydrogen phosphate | 1065917: Antagonist activity at human TRPM2 expressed in HEK293 cells assessed as inhibition of ADPR-induced maximum outward potassium current at +15 mV by whole-cell patch-clamp electrophysiology | ic50 | 3.0000 | uM |
| 6-bromo-8-methyl-2-(5-naphthalen-1-yl-1H-pyrazol-4-yl)-2,3-dihydro-1H-quinazolin-4-one | 1359285: Inhibition of human TRPM2 expressed in HEK293 cells assessed as reduction in ADPR-induced channel currents treated extracellularly after 60 secs by whole cell patch clamp electrophysiology method | ic50 | 3.7000 | uM |
| 6-chloro-8-methyl-2-(5-naphthalen-1-yl-1H-pyrazol-4-yl)-2,3-dihydro-1H-quinazolin-4-one | 1359285: Inhibition of human TRPM2 expressed in HEK293 cells assessed as reduction in ADPR-induced channel currents treated extracellularly after 60 secs by whole cell patch clamp electrophysiology method | ic50 | 4.0000 | uM |
| 6-bromo-8-methyl-2-(5-phenyl-1H-pyrazol-4-yl)-2,3-dihydro-1H-quinazolin-4-one | 1359285: Inhibition of human TRPM2 expressed in HEK293 cells assessed as reduction in ADPR-induced channel currents treated extracellularly after 60 secs by whole cell patch clamp electrophysiology method | ic50 | 4.6000 | uM |
| 6-chloro-8-methyl-2-(5-phenyl-1H-pyrazol-4-yl)-2,3-dihydro-1H-quinazolin-4-one | 1359285: Inhibition of human TRPM2 expressed in HEK293 cells assessed as reduction in ADPR-induced channel currents treated extracellularly after 60 secs by whole cell patch clamp electrophysiology method | ic50 | 5.1000 | uM |
| [4-[2-(diethylamino)ethyl]-2-methylimidazo[1,2-a]benzimidazol-1-yl]-(4-phenylphenyl)methanone | 1784468: Inhibition of human TRPM2 expressed in HEK293T cells cotransfected with GFP assessed as reduction in ADPR-induced current by whole cell patch-clamp method | ic50 | 6.2000 | uM |
| 1-benzofuran-2-yl-[4-[2-(diethylamino)ethyl]-2-methylimidazo[1,2-a]benzimidazol-1-yl]methanone | 1784468: Inhibition of human TRPM2 expressed in HEK293T cells cotransfected with GFP assessed as reduction in ADPR-induced current by whole cell patch-clamp method | ic50 | 8.1000 | uM |
CTD chemical–gene interactions
33 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| 4-amylcinnamoylanthranilic acid | decreases reaction, increases activity, increases reaction, decreases activity | 3 |
| Adenosine Diphosphate Ribose | decreases reaction, increases activity, increases reaction | 3 |
| Hydrogen Peroxide | increases activity, increases response to substance | 3 |
| 2-aminoethoxydiphenyl borate | decreases reaction, increases activity, decreases activity | 2 |
| Calcium | decreases activity, decreases reaction, increases abundance, affects reaction, increases transport | 2 |
| aristolochic acid I | increases expression | 1 |
| diphenoquinone | decreases activity | 1 |
| ethyl-p-hydroxybenzoate | increases expression | 1 |
| lead nitrate | decreases reaction, increases activity | 1 |
| zinc chromate | decreases expression, increases abundance | 1 |
| ferrous chloride | decreases reaction, increases activity | 1 |
| chromium hexavalent ion | decreases expression, increases abundance | 1 |
| pinostrobin | increases expression | 1 |
| N-(oxo-5,6-dihydrophenanthridin-2-yl)-N,N-dimethylacetamide hydrochloride | decreases activity | 1 |
| abrine | increases expression | 1 |
| Decitabine | decreases expression | 1 |
| Air Pollutants | affects expression, increases abundance | 1 |
| Arsenic | affects methylation | 1 |
| Benzo(a)pyrene | affects methylation | 1 |
| Cisplatin | decreases reaction, increases activity, increases reaction | 1 |
| Clotrimazole | decreases activity, decreases reaction, increases abundance | 1 |
| Econazole | decreases activity, decreases reaction, increases abundance | 1 |
| Lithium | decreases reaction, increases expression | 1 |
| Mercuric Chloride | decreases reaction, increases activity | 1 |
| Miconazole | decreases reaction, increases activity | 1 |
| Monensin | decreases reaction, increases expression, decreases expression | 1 |
| Mustard Gas | affects response to substance, decreases activity, decreases reaction, increases abundance, affects reaction | 1 |
| Ozone | increases abundance, affects expression | 1 |
| Valproic Acid | increases methylation | 1 |
| Eicosapentaenoic Acid | increases reaction, decreases reaction, increases activity | 1 |
ChEMBL screening assays
59 unique, capped per target: 58 binding, 1 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1252890 | Binding | Induction of TRPM2 S-nitrosylation in HEK cells assessed as increase in Ca2+ level from extracellular space at 30 uM | Nitric oxide activates TRP channels by cysteine S-nitrosylation. — Nat Chem Biol |
| CHEMBL3734573 | Functional | Inhibition of TRPM2 (unknown origin) expressed in HEK293 cells assessed as effect on agonist-induced Ca2+ changes | Agents and methods for treating ischemic and other diseases |
Cellosaurus cell lines
6 cell lines: 6 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_D1LC | Abcam Jurkat TRPM2 KO | Cancer cell line | Male |
| CVCL_D1R5 | Abcam K-562 TRPM2 KO | Cancer cell line | Female |
| CVCL_D2MS | Abcam Raji TRPM2 KO | Cancer cell line | Male |
| CVCL_E2MP | HAP1 TRPM2 (-) 1 | Cancer cell line | Male |
| CVCL_E2MQ | HAP1 TRPM2 (-) 2 | Cancer cell line | Male |
| CVCL_E2MR | HAP1 TRPM2 (-) 3 | Cancer cell line | Male |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
- Targeted by drugs: Calcium, Clotrimazole, Econazole, Hydrogen Peroxide, Miconazole, Zinc Ion
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): anorectal malformation, dental caries, Parkinson disease, peripheral neuropathy