TRPM7
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Also known as CHAK1LTRPC7TRP-PLIK
Summary
TRPM7 (transient receptor potential cation channel subfamily M member 7, HGNC:17994) is a protein-coding gene on chromosome 15q21.2, encoding Transient receptor potential cation channel subfamily M member 7 (Q96QT4). Bifunctional protein that combines an ion channel with an intrinsic kinase domain, enabling it to modulate cellular functions either by conducting ions through the pore or by phosphorylating downstream proteins via its kinase domain. It is a selective cancer dependency (DepMap: 62.2% of cell lines).
This gene belongs to the melastatin subfamily of transient receptor potential family of ion channels. The protein encoded by this gene is both an ion channel and a serine/threonine protein kinase. The kinase activity is essential for the ion channel function, which serves to increase intracellular calcium levels and to help regulate magnesium ion homeostasis. The encoded protein is involved in cytoskeletal organization, cell adhesion, cell migration and organogenesis. Defects in this gene are a cause of amyotrophic lateral sclerosis-parkinsonism/dementia complex of Guam. The gene may also be associated with defects of cardiac function.
Source: NCBI Gene 54822 — RefSeq curated summary.
At a glance
- Gene–disease (curated): familial primary hypomagnesemia (Strong, GenCC) — +5 more curated relationships
- GWAS associations: 13
- Clinical variants (ClinVar): 326 total — 3 pathogenic
- Phenotypes (HPO): 21
- Druggable target: yes
- Cancer dependency (DepMap): dependent in 62.2% of screened cell lines
- MANE Select transcript:
NM_017672
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:17994 |
| Approved symbol | TRPM7 |
| Name | transient receptor potential cation channel subfamily M member 7 |
| Location | 15q21.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | CHAK1, LTRPC7, TRP-PLIK |
| Ensembl gene | ENSG00000092439 |
| Ensembl biotype | protein_coding |
| OMIM | 605692 |
| Entrez | 54822 |
Gene structure
Transcript identifiers
Ensembl transcripts: 10 — 5 retained_intron, 4 protein_coding, 1 protein_coding_CDS_not_defined
ENST00000558444, ENST00000560284, ENST00000560516, ENST00000560638, ENST00000560849, ENST00000560955, ENST00000561267, ENST00000561443, ENST00000645282, ENST00000646667
RefSeq mRNA: 2 — MANE Select: NM_017672
NM_001301212, NM_017672
CCDS: CCDS42035, CCDS73725
Canonical transcript exons
ENST00000646667 — 39 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000884659 | 50614123 | 50614263 |
| ENSE00000884661 | 50619745 | 50619798 |
| ENSE00000884663 | 50624166 | 50624300 |
| ENSE00000884665 | 50628149 | 50628249 |
| ENSE00000884666 | 50631417 | 50631489 |
| ENSE00000884669 | 50632869 | 50632992 |
| ENSE00000884670 | 50634382 | 50634556 |
| ENSE00000884674 | 50639424 | 50639548 |
| ENSE00000884675 | 50643340 | 50643553 |
| ENSE00000884677 | 50648687 | 50648885 |
| ENSE00000884679 | 50657781 | 50657819 |
| ENSE00000942189 | 50637422 | 50637593 |
| ENSE00000942190 | 50613707 | 50613841 |
| ENSE00001015026 | 50607200 | 50607328 |
| ENSE00001015028 | 50593617 | 50593749 |
| ENSE00001015029 | 50609806 | 50609961 |
| ENSE00001015031 | 50609581 | 50609724 |
| ENSE00001015035 | 50583089 | 50583159 |
| ENSE00001015037 | 50604866 | 50605144 |
| ENSE00001015039 | 50599122 | 50599296 |
| ENSE00001015041 | 50589592 | 50589656 |
| ENSE00001015042 | 50591911 | 50592626 |
| ENSE00001015048 | 50611093 | 50611321 |
| ENSE00001015052 | 50612549 | 50612829 |
| ENSE00001015056 | 50586392 | 50586488 |
| ENSE00001316070 | 50662967 | 50663046 |
| ENSE00002573869 | 50557158 | 50561808 |
| ENSE00003460516 | 50574637 | 50574719 |
| ENSE00003461129 | 50596255 | 50596381 |
| ENSE00003490803 | 50575869 | 50575919 |
| ENSE00003525258 | 50574852 | 50575135 |
| ENSE00003536554 | 50570104 | 50570155 |
| ENSE00003543849 | 50575724 | 50575789 |
| ENSE00003559439 | 50574274 | 50574479 |
| ENSE00003559788 | 50580874 | 50580908 |
| ENSE00003564664 | 50569887 | 50569993 |
| ENSE00003566028 | 50594429 | 50594613 |
| ENSE00003640191 | 50578639 | 50578664 |
| ENSE00003814321 | 50686531 | 50686797 |
Expression profiles
Bgee: expression breadth ubiquitous, 247 present calls, max score 96.15.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 18.1925 / max 187.9243, expressed in 1805 samples.
FANTOM5 promoters (2 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 149872 | 13.4469 | 1793 |
| 149871 | 4.7456 | 1587 |
Top tissues by expression
253 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| left ventricle myocardium | UBERON:0006566 | 96.15 | gold quality |
| calcaneal tendon | UBERON:0003701 | 95.45 | gold quality |
| cardiac muscle of right atrium | UBERON:0003379 | 94.35 | gold quality |
| adrenal tissue | UBERON:0018303 | 91.74 | gold quality |
| colonic epithelium | UBERON:0000397 | 91.56 | gold quality |
| sural nerve | UBERON:0015488 | 91.33 | gold quality |
| tendon | UBERON:0000043 | 91.17 | gold quality |
| cartilage tissue | UBERON:0002418 | 90.13 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 89.70 | gold quality |
| myocardium | UBERON:0002349 | 89.45 | gold quality |
| mucosa of stomach | UBERON:0001199 | 88.80 | gold quality |
| right lobe of liver | UBERON:0001114 | 88.70 | gold quality |
| buccal mucosa cell | CL:0002336 | 88.55 | silver quality |
| stromal cell of endometrium | CL:0002255 | 88.49 | gold quality |
| bone marrow cell | CL:0002092 | 88.20 | gold quality |
| islet of Langerhans | UBERON:0000006 | 88.19 | gold quality |
| monocyte | CL:0000576 | 87.91 | gold quality |
| leukocyte | CL:0000738 | 87.77 | gold quality |
| kidney epithelium | UBERON:0004819 | 87.49 | gold quality |
| rectum | UBERON:0001052 | 87.34 | gold quality |
| liver | UBERON:0002107 | 87.34 | gold quality |
| left ovary | UBERON:0002119 | 87.31 | gold quality |
| heart left ventricle | UBERON:0002084 | 86.83 | gold quality |
| vermiform appendix | UBERON:0001154 | 86.75 | gold quality |
| right ovary | UBERON:0002118 | 86.72 | gold quality |
| ovary | UBERON:0000992 | 86.69 | gold quality |
| cardiac ventricle | UBERON:0002082 | 86.68 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 86.63 | gold quality |
| cortex of kidney | UBERON:0001225 | 86.50 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 86.30 | gold quality |
Single-cell (SCXA)
Detected in 4 experiment(s), a significant marker in 3.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-GEOD-131882 | yes | 3492.00 |
| E-CURD-119 | yes | 3271.27 |
| E-ANND-3 | yes | 5.90 |
| E-MTAB-7606 | no | 127.48 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
161 targeting TRPM7, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3163 | 100.00 | 77.23 | 8605 |
| HSA-MIR-5011-5P | 100.00 | 83.46 | 5820 |
| HSA-MIR-1277-5P | 100.00 | 73.95 | 5056 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-LET-7A-3P | 100.00 | 74.03 | 3932 |
| HSA-LET-7B-3P | 100.00 | 74.08 | 3913 |
| HSA-LET-7F-1-3P | 100.00 | 74.02 | 3928 |
| HSA-MIR-98-3P | 100.00 | 74.08 | 3907 |
| HSA-MIR-30A-5P | 100.00 | 76.31 | 3233 |
| HSA-MIR-30B-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30C-5P | 100.00 | 76.29 | 3248 |
| HSA-MIR-30D-5P | 100.00 | 76.32 | 3233 |
| HSA-MIR-30E-5P | 100.00 | 76.32 | 3242 |
| HSA-MIR-3646 | 100.00 | 73.56 | 5283 |
| HSA-MIR-9-5P | 100.00 | 72.28 | 2361 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-190A-3P | 100.00 | 80.35 | 5520 |
| HSA-MIR-4795-3P | 100.00 | 74.62 | 4024 |
| HSA-MIR-4673 | 100.00 | 66.64 | 1490 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-371B-5P | 99.99 | 75.34 | 4759 |
| HSA-MIR-186-5P | 99.99 | 70.83 | 3707 |
| HSA-MIR-150-5P | 99.99 | 66.69 | 1976 |
| HSA-MIR-3662 | 99.99 | 73.82 | 5684 |
| HSA-MIR-373-5P | 99.98 | 75.36 | 4753 |
| HSA-MIR-616-5P | 99.98 | 75.58 | 4775 |
| HSA-MIR-12136 | 99.98 | 72.81 | 5713 |
| HSA-MIR-4775 | 99.98 | 75.00 | 6394 |
| HSA-MIR-5696 | 99.98 | 72.36 | 4487 |
Functional genomics
DepMap (CRISPR cell-line fitness): dependent in 62.2% of screened cell lines.
Literature-anchored findings (GeneRIF, showing 40)
- only Mg(2+) can directly modulate TRPM7/ChaK1 kinase activity in vivo (PMID:14594813)
- TRPM7 activity is up- and down-regulated through its endogenous kinase in a cAMP- and protein kinase A-dependent manner (PMID:15069188)
- TRPM7 is a functionally important regulator of Mg2+ homeostasis and growth in vascular smooth muscle cells. (PMID:15591230)
- A TRPM7 variant shows altered sensitivity to magnesium that may contribute to the pathogenesis of two Guamanian neurodegenerative disorders. (PMID:16051700)
- TRPM7-deficient cells become Mg(2+) deficient & are not viable.TRPM7 is characterized functionally as constitutively active ion channel permeable for variety of cations including Ca & Mg & regulated by intracellular Mg &/or Mg-nucleotide complexes[review] (PMID:16075242)
- Although TRPM6 and TRPM7 are closely related and deficiency in either one of these molecules severely affects Mg(2+) homeostasis regulation, TRPM6 and TRPM7 do not appear to be functionally redundant. (PMID:16150690)
- Both endogenous and heterologously expressed TRPM7 was found in tubulovesicular structures that were translocated to the region of the plasma membrane on induction of shear stress. (PMID:16357306)
- Regulation of cell adhesion by TRPM7 is the combined effect of kinase-dependent and -independent pathways on actomyosin contractility. (PMID:16407977)
- the ion channel TRPM7 regulates cell adhesion through m-calpain by mediating the local influx of calcium into peripheral adhesion complexes (PMID:16436382)
- We conclude that the nucleotide-dependent regulation of TRPM7 is mediated by the nucleotide binding site on the channel’s endogenous kinase domain and interacts synergistically with a Mg(2+) binding site extrinsic to that domain. (PMID:16533898)
- heterologous expression of TRPM6 but not the mutant TRPM6(S141L) produces functional channels with divalent cation permeability profile and pH sensitivity distinctive from those of TRPM7 channels and TRPM6/7 complexes (PMID:16636202)
- TRPM7 is stretch- and swelling-activated cation channel endogenously expressed in HeLa cells. By serving as swelling-induced Ca(2+) influx pathway, it has important role in cell volume regulation. (PMID:16943238)
- under physiological ionic conditions, TRPM7 currents are activated rather than inhibited by PLC-activating receptor agonists (PMID:17095511)
- the channel may serve as a regulated transport mechanism for these ions that could affect cell adhesion, cell growth and proliferation, and even cell death under pathological stress such as anoxia–{REVIEW} (PMID:17217066)
- We thus conclude that the TRPM7 channel can be directly activated by mechano-stress in a manner independent of exocytosis-mediated incorporation of this channel protein into the plasma membrane. (PMID:17310095)
- TRPM7 senses osmotically induced changes primarily through molecular crowding of solutes that affect channel activity. (PMID:17510191)
- The inner membrane potential (as regulated by proton ionophores) and the F1/FO-ATP synthase of mitochondria are important in regulating TRPM7 channels. (PMID:17646711)
- Human mast cells express functional TRPM7 channels that are a critical requirement for cell survival. (PMID:17785843)
- The subjects who carried >or=1 1482Ile allele and who consumed diets with a high Ca:Mg intake were at a higher risk of adenoma and hyperplastic polyps than were the subjects who did not carry the polymorphism (PMID:17823441)
- Transient receptor potential melastatin 7-like current has a role in cell proliferation in human head and neck carcinoma cells (PMID:18006838)
- restoration of only two “ancient” pore residues in human TRPM2 (Q981E/P983Y) significantly increased (approximately 4-fold) its permeability for Ca(2+). (PMID:18073331)
- This review discusses the importance of magnesium in vascular biology and implications in hypertension and highlights the transport systems, particularly TRPM7–REVIEW (PMID:18192217)
- The predominant Mg transporters include TRPM6 and TRPM7 (PMID:18301276)
- findings support a model where massive autophosphorylation outside the catalytic domain of TRPM6 and TRPM7 may facilitate kinase-substrate interactions leading to enhanced phosphorylation of those substrates (PMID:18365021)
- proton conductivity of endogenous human TRPM7 plays a role in physiologically/pathologically acidic situations. (PMID:18390554)
- TRPM6 and TRPM7 phosphorylate the assembly domain of myosin IIA, IIB and IIC on identical residues. (PMID:18675813)
- in human TRPM7, both Asp-1054 and Glu-1052, may provide binding sites for Mg(2+) and Ca(2+); Asp-1054 is an essential determinant of Mg(2+)and Ca(2+) conductivity; Glu-1052 and Asp-1059 facilitate conduction of divalent cations (PMID:18719395)
- TRPM7 is present in human head and neck squamous carcinoma cells. siRNA silencing of TRPM7 inhibited the growth and proliferation of these cells. (PMID:18826101)
- Suppression of TRPM7 induces cell death in gastric cancer. (PMID:19032368)
- bradykinin regulates TRPM7 and its downstream target annexin-1 through phospholipase C-dependent, protein kinase C-dependent and c-Src-dependent and cAMP-independent pathways. (PMID:19145781)
- there was no evidence of association between common TRPM7 haplotypes and diabetes risk (PMID:19149903)
- results indicate that TRPM7 is not associated with ALS/PDC in the Kii peninsula of Japan (PMID:19405049)
- Silencing TRPM7 promotes growth/proliferation and nitric oxide production of vascular endothelial cells via the ERK pathway. (PMID:19454490)
- These findings strongly suggest that TRPM7 is involved in the proliferative potentiality of breast cancer cells, probably by regulating Ca(2+) influx. (PMID:19515901)
- no evidence of a role for the TRPM7 gene in the risk of incident ischemic stroke. (PMID:19644062)
- These results suggest that the human GI tract generates slow waves and that TRPM7 channels expressed in the interstitial cells of Cajal may be involved in the generation of the slow waves. (PMID:19998500)
- excessive TRPM7 channel activity causes oxidative and nitrosative stresses, producing cell rounding mediated by p38 MAPK/JNK-dependent activation of m-calpain (PMID:20070945)
- Results establish that TRPM7 is the major Ca(2+)-permeable channel in human atrial fibroblasts and likely plays an essential role in TGF-beta1-elicited fibrogenesis in human atrial fibrillation. (PMID:20075334)
- The present investigation further suggests that TRPM6 and TRPM7 gene variation may not be useful predictors for type 2 diabetes mellitus risk assessment. (PMID:20875900)
- TRPM7’s structural duality ensures ideal positioning of its kinase in close proximity to channel-mediated Mg(2+) uptake, allowing for the adjustment of protein translational rates to the availability of Mg(2+). (PMID:21112387)
Cross-species orthologs
9 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | trpm7 | ENSDARG00000036232 |
| mus_musculus | Trpm7 | ENSMUSG00000027365 |
| rattus_norvegicus | Trpm7 | ENSRNOG00000057806 |
| drosophila_melanogaster | Trpm | FBGN0265194 |
| caenorhabditis_elegans | gon-2 | WBGENE00001651 |
| caenorhabditis_elegans | WBGENE00004149 | |
| caenorhabditis_elegans | WBGENE00020972 | |
| caenorhabditis_elegans | WBGENE00021404 | |
| caenorhabditis_elegans | WBGENE00021408 |
Paralogs (7): TRPM5 (ENSG00000070985), TRPM3 (ENSG00000083067), TRPM6 (ENSG00000119121), TRPM4 (ENSG00000130529), TRPM1 (ENSG00000134160), TRPM2 (ENSG00000142185), TRPM8 (ENSG00000144481)
Protein
Protein identifiers
Transient receptor potential cation channel subfamily M member 7 — Q96QT4 (reviewed: Q96QT4)
Alternative names: Channel-kinase 1, Long transient receptor potential channel 7
All UniProt accessions (4): Q96QT4, A0A0C4DGL2, H0YLN8, H0YNM0
UniProt curated annotations — full annotation on UniProt →
Function. Bifunctional protein that combines an ion channel with an intrinsic kinase domain, enabling it to modulate cellular functions either by conducting ions through the pore or by phosphorylating downstream proteins via its kinase domain. The channel is highly permeable to divalent cations, specifically calcium (Ca2+), magnesium (Mg2+) and zinc (Zn2+) and mediates their influx. Controls a wide range of biological processes such as Ca2(+), Mg(2+) and Zn(2+) homeostasis, vesicular Zn(2+) release channel and intracellular Ca(2+) signaling, embryonic development, immune responses, cell motility, proliferation and differentiation. The C-terminal alpha-kinase domain autophosphorylates cytoplasmic residues of TRPM7. In vivo, TRPM7 phosphorylates SMAD2, suggesting that TRPM7 kinase may play a role in activating SMAD signaling pathways. In vitro, TRPM7 kinase phosphorylates ANXA1 (annexin A1), myosin II isoforms and a variety of proteins with diverse cellular functions. The cleaved channel exhibits substantially higher current and potentiates Fas receptor signaling. The C-terminal kinase domain can be cleaved from the channel segment in a cell-type-specific fashion. In immune cells, the TRPM7 kinase domain is clipped from the channel domain by caspases in response to Fas-receptor stimulation. The cleaved kinase fragments can translocate to the nucleus, and bind chromatin-remodeling complex proteins in a Zn(2+)-dependent manner to ultimately phosphorylate specific Ser/Thr residues of histones known to be functionally important for cell differentiation and embryonic development.
Subunit / interactions. Homotetramer. Interacts with PLCB1. Forms heteromers with TRPM6; heteromeric channels are functionally different from the homomeric channels.
Subcellular location. Cell membrane. Cytoplasmic vesicle membrane Nucleus.
Post-translational modifications. Palmitoylated; palmitoylation at Cys-1143, Cys-1144 and Cys-1146 promotes TRPM7 trafficking from the Golgi to the surface membrane. Autophosphorylated; autophosphorylation of C-terminus regulates TRPM7 kinase activity towards its substrates. The C-terminal kinase domain can be cleaved from the channel segment in a cell-type-specific fashion. TRPM7 is cleaved by caspase-8, dissociating the kinase from the ion-conducting pore. The cleaved kinase fragments (M7CKs) can translocate to the cell nucleus and binds chromatin-remodeling complex proteins in a Zn(2+)-dependent manner to ultimately phosphorylate specific Ser/Thr residues of histones.
Disease relevance. Amyotrophic lateral sclerosis-parkinsonism/dementia complex 1 (ALS-PDC1) [MIM:105500] A neurodegenerative disorder characterized by chronic, progressive and uniformly fatal amyotrophic lateral sclerosis and parkinsonism-dementia. Both diseases are known to occur in the same kindred, the same sibship and even the same individual. Disease susceptibility is associated with variants affecting the gene represented in this entry. TRPM7 variants have been identified as a potential cause of disease in patients suffering from seizures and muscle cramps due to magnesium deficiency and episodes of hypocalcemia.
Activity regulation. Channel displays constitutive activity. Channel activity is negatively regulated by cytosolic Mg(2+) and Mg-ATP. Channel activity is negatively regulated by low intracellular pH. Resting free cytosolic Mg(2+) and Mg-ATP concentrations seem to be sufficient to block native TRPM7 channel activity. TRPM7 channel activity is highly dependent on membrane levels of phosphatidylinositol 4,5 bisphosphate (PIP2). PIP2 hydrolysis negatively regulates TRPM7 channel activity. TRPM7 kinase activity does not affect channel activity. The kinase activity is controlled through the autophosphorylation of a serine/threonine-rich region located N-terminal to the catalytic domain.
Cofactor. Binds 1 zinc ion per subunit.
Similarity. In the C-terminal section; belongs to the protein kinase superfamily. Alpha-type protein kinase family. ALPK subfamily. In the N-terminal section; belongs to the transient receptor (TC 1.A.4) family. LTrpC subfamily. TRPM7 sub-subfamily.
RefSeq proteins (2): NP_001288141, NP_060142* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR004166 | a-kinase_dom | Domain |
| IPR011009 | Kinase-like_dom_sf | Homologous_superfamily |
| IPR029601 | TRPM7_a-kinase_dom | Domain |
| IPR032415 | TRPM_tetra | Domain |
| IPR037162 | TRPM_tetra_sf | Homologous_superfamily |
| IPR041491 | TRPM_SLOG | Domain |
| IPR050927 | TRPM | Family |
| IPR057366 | TRPM-like | Domain |
Pfam: PF02816, PF16519, PF18139, PF25508
Catalyzed reactions (Rhea), 5 shown:
- L-seryl-[protein] + ATP = O-phospho-L-seryl-[protein] + ADP + H(+) (RHEA:17989)
- Zn(2+)(in) = Zn(2+)(out) (RHEA:29351)
- Ca(2+)(in) = Ca(2+)(out) (RHEA:29671)
- Mg(2+)(in) = Mg(2+)(out) (RHEA:29827)
- L-threonyl-[protein] + ATP = O-phospho-L-threonyl-[protein] + ADP + H(+) (RHEA:46608)
UniProt features (123 total): modified residue 54, sequence variant 16, binding site 13, topological domain 8, transmembrane region 6, region of interest 5, compositionally biased region 5, sequence conflict 4, chain 3, lipid moiety-binding region 3, mutagenesis site 2, intramembrane region 1, domain 1, coiled-coil region 1, active site 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q96QT4-F1 | 69.90 | 0.19 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 1767 (proton acceptor)
Ligand- & substrate-binding residues (13): 1621; 1622; 1623; 1624; 1648; 1720; 1721; 1723; 1753; 1777; 1810; 1812 …
Post-translational modifications (57): 1146, 1, 101, 1163, 1191, 1193, 1224, 1255, 1258, 1265, 1287, 1301, 1358, 1361, 1386, 1387, 1390, 1395, 1396, 1404 …
Mutagenesis-validated functional residues (2):
| Position | Phenotype |
|---|---|
| 1648 | loss of kinase activity. |
| 1799 | loss of kinase activity. |
Function
Pathways and Gene Ontology
Reactome pathways
1 pathways
| ID | Pathway |
|---|---|
| R-HSA-3295583 | TRP channels |
MSigDB gene sets: 214 (showing top):
GOBP_PROTEIN_HOMOTETRAMERIZATION, NKX25_02, GOBP_TRANSITION_METAL_ION_TRANSPORT, AAGCCAT_MIR135A_MIR135B, GRAESSMANN_APOPTOSIS_BY_DOXORUBICIN_DN, AREB6_01, GOCC_RUFFLE, GOBP_MAGNESIUM_ION_TRANSPORT, GOBP_MONOATOMIC_CATION_TRANSPORT, GOBP_ACTOMYOSIN_STRUCTURE_ORGANIZATION, CHIANG_LIVER_CANCER_SUBCLASS_INTERFERON_DN, DODD_NASOPHARYNGEAL_CARCINOMA_UP, TGTTTAC_MIR30A5P_MIR30C_MIR30D_MIR30B_MIR30E5P, GOBP_MONOATOMIC_ION_HOMEOSTASIS, GOMF_ACTIN_BINDING
GO Biological Process (20): protein phosphorylation (GO:0006468), calcium ion transport (GO:0006816), zinc ion transport (GO:0006829), magnesium ion homeostasis (GO:0010960), intracellular magnesium ion homeostasis (GO:0010961), magnesium ion transport (GO:0015693), calcium-dependent cell-matrix adhesion (GO:0016340), actomyosin structure organization (GO:0031032), protein autophosphorylation (GO:0046777), protein homotetramerization (GO:0051289), necroptotic process (GO:0070266), calcium ion transmembrane transport (GO:0070588), monoatomic cation transmembrane transport (GO:0098655), monoatomic ion transport (GO:0006811), programmed cell death (GO:0012501), monoatomic ion transmembrane transport (GO:0034220), protein tetramerization (GO:0051262), transmembrane transport (GO:0055085), zinc ion transmembrane transport (GO:0071577), magnesium ion transmembrane transport (GO:1903830)
GO Molecular Function (16): actin binding (GO:0003779), protein kinase activity (GO:0004672), protein serine/threonine kinase activity (GO:0004674), calcium channel activity (GO:0005262), zinc ion transmembrane transporter activity (GO:0005385), ATP binding (GO:0005524), magnesium ion transmembrane transporter activity (GO:0015095), myosin binding (GO:0017022), metal ion binding (GO:0046872), protein serine kinase activity (GO:0106310), nucleotide binding (GO:0000166), monoatomic ion channel activity (GO:0005216), monoatomic cation channel activity (GO:0005261), protein binding (GO:0005515), kinase activity (GO:0016301), transferase activity (GO:0016740)
GO Cellular Component (6): ruffle (GO:0001726), nucleus (GO:0005634), plasma membrane (GO:0005886), cytoplasmic vesicle membrane (GO:0030659), cytoplasmic vesicle (GO:0031410), membrane (GO:0016020)
Reactome top-level categories
Rollup of top-1 pathways:
| Category | Pathways |
|---|---|
| Stimuli-sensing channels | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| monoatomic cation transmembrane transport | 3 |
| metal ion transport | 2 |
| transport | 2 |
| cytoskeletal protein binding | 2 |
| protein kinase activity | 2 |
| phosphorylation | 1 |
| protein modification process | 1 |
| transition metal ion transport | 1 |
| monoatomic cation homeostasis | 1 |
| inorganic ion homeostasis | 1 |
| magnesium ion homeostasis | 1 |
| intracellular monoatomic cation homeostasis | 1 |
| cell-matrix adhesion | 1 |
| actin cytoskeleton organization | 1 |
| protein phosphorylation | 1 |
| protein homooligomerization | 1 |
| protein tetramerization | 1 |
| programmed necrotic cell death | 1 |
| calcium ion transport | 1 |
| monoatomic cation transport | 1 |
| monoatomic ion transmembrane transport | 1 |
| signal transduction | 1 |
| cell death | 1 |
| monoatomic ion transport | 1 |
| transmembrane transport | 1 |
| protein complex oligomerization | 1 |
| cellular process | 1 |
| zinc ion transport | 1 |
| magnesium ion transport | 1 |
| kinase activity | 1 |
| phosphotransferase activity, alcohol group as acceptor | 1 |
| catalytic activity, acting on a protein | 1 |
| monoatomic cation channel activity | 1 |
| calcium ion transmembrane transporter activity | 1 |
| transition metal ion transmembrane transporter activity | 1 |
| zinc ion transmembrane transport | 1 |
| adenyl ribonucleotide binding | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| metal ion transmembrane transporter activity | 1 |
| magnesium ion transmembrane transport | 1 |
Protein interactions and networks
STRING
1760 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| TRPM7 | TRPC1 | P48995 | 808 |
| TRPM7 | TRPV2 | Q9Y5S1 | 791 |
| TRPM7 | SLC41A1 | Q8IVJ1 | 781 |
| TRPM7 | TRPA1 | O75762 | 751 |
| TRPM7 | TRPV4 | Q9HBA0 | 751 |
| TRPM7 | TRPV6 | Q9H1D0 | 743 |
| TRPM7 | TRPV1 | Q8NER1 | 742 |
| TRPM7 | TRPM6 | Q9BX84 | 741 |
| TRPM7 | SLC41A2 | Q96JW4 | 737 |
| TRPM7 | TRPV3 | Q8NET8 | 726 |
| TRPM7 | TRPV5 | Q9NQA5 | 720 |
| TRPM7 | PLCB1 | Q9NQ66 | 714 |
| TRPM7 | SLC41A3 | Q96GZ6 | 679 |
| TRPM7 | MAGT1 | Q9H0U3 | 675 |
| TRPM7 | STIM1 | Q13586 | 657 |
IntAct
56 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| NEURL4 | APBB1 | psi-mi:“MI:0914”(association) | 0.530 |
| ZACN | GPAA1 | psi-mi:“MI:0914”(association) | 0.530 |
| ARL15 | SLC25A20 | psi-mi:“MI:0914”(association) | 0.530 |
| PTP4A1 | ATE1 | psi-mi:“MI:0914”(association) | 0.530 |
| PKD2L2 | PKD2 | psi-mi:“MI:0914”(association) | 0.530 |
| TRPM7 | MYH9 | psi-mi:“MI:0217”(phosphorylation reaction) | 0.440 |
| TRPM7 | MYH10 | psi-mi:“MI:0217”(phosphorylation reaction) | 0.440 |
| TRPM7 | MYH14 | psi-mi:“MI:0217”(phosphorylation reaction) | 0.440 |
| TRPM7 | RPL27 | psi-mi:“MI:0915”(physical association) | 0.400 |
| GPC1 | SNAP23 | psi-mi:“MI:0915”(physical association) | 0.400 |
| GPC1 | GANAB | psi-mi:“MI:0915”(physical association) | 0.400 |
| K8.1 | EXOC5 | psi-mi:“MI:0914”(association) | 0.350 |
| NEURL4 | CCDC85C | psi-mi:“MI:0914”(association) | 0.350 |
| TEX28 | NBAS | psi-mi:“MI:0914”(association) | 0.350 |
| SNAP29 | RNF40 | psi-mi:“MI:0914”(association) | 0.350 |
| PNLDC1 | C1QL1 | psi-mi:“MI:0914”(association) | 0.350 |
| TTMP | TMEM223 | psi-mi:“MI:0914”(association) | 0.350 |
| TTYH1 | TMEM223 | psi-mi:“MI:0914”(association) | 0.350 |
| ZACN | FAM234B | psi-mi:“MI:0914”(association) | 0.350 |
| PSCA | METTL15 | psi-mi:“MI:0914”(association) | 0.350 |
| NKAIN1 | GPR89A | psi-mi:“MI:0914”(association) | 0.350 |
| RABEP2 | HECTD4 | psi-mi:“MI:0914”(association) | 0.350 |
| EIF2B5 | GOLIM4 | psi-mi:“MI:0914”(association) | 0.350 |
| RYK | TNFRSF10B | psi-mi:“MI:0914”(association) | 0.350 |
| CD3D | CLGN | psi-mi:“MI:0914”(association) | 0.350 |
| CCDC107 | TMEM131L | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (179): TRPM7 (Affinity Capture-MS), TRPM7 (Affinity Capture-MS), TRPM7 (Proximity Label-MS), TRPM7 (Affinity Capture-MS), TRPM7 (Affinity Capture-MS), TRPM7 (Affinity Capture-MS), TRPM7 (Affinity Capture-MS), TRPM7 (Affinity Capture-MS), TRPM7 (Affinity Capture-MS), TRPM7 (Affinity Capture-MS), TRPM7 (Affinity Capture-MS), TRPM7 (Affinity Capture-MS), TRPM7 (Affinity Capture-MS), TRPM7 (Affinity Capture-MS), TRPM7 (Affinity Capture-MS)
ESM2 similar proteins: A0A0R4IMY7, A0JPA0, A2AP18, A8DYE2, J9SQF3, O00329, O35904, O75038, P0C1Q3, P0C588, P19687, P33402, P48736, P97557, Q02108, Q09M05, Q148L1, Q1LWG4, Q2TV84, Q2WEA5, Q3USB7, Q4ZHS0, Q502J0, Q5EBA1, Q60565, Q62688, Q69ZF7, Q6P4Q7, Q6PA06, Q7L5N7, Q7TN37, Q7Z2W7, Q7Z4N2, Q80YD1, Q8BTI9, Q8BYI6, Q8BZN2, Q8CIR4, Q8NHH9, Q8R455
Diamond homologs: A0A0R4IMY7, A7T1N0, A8DYE2, E9PTA2, J9SQF3, O94759, Q09297, Q2TV84, Q2WEA5, Q5XIG0, Q7TN37, Q7Z2W7, Q7Z4N2, Q8BVU5, Q8CIR4, Q8R455, Q8R4D5, Q8TD43, Q91YD4, Q923J1, Q925B3, Q96QT4, Q9BW91, Q9BX84, Q9ESQ5, Q9HCF6, S5UH55, Q93971, O00418, O01991, O08796, P42527, P70531, P90648, Q54DK4, Q54SF9, Q6B9X6, Q8MY12, Q9CXB8, Q9JJH7
SIGNOR signaling
5 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| TRPM7 | up-regulates | ANXA1 | phosphorylation |
| TRPM7 | “up-regulates activity” | EEF2K | phosphorylation |
| TRPM7 | “up-regulates activity” | PLCG2 | phosphorylation |
| TRPM6 | “down-regulates quantity” | TRPM7 | phosphorylation |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 78 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Activation of BAD and translocation to mitochondria | 7 | 113.4× | 6e-12 |
| Chk1/Chk2(Cds1) mediated inactivation of Cyclin B:Cdk1 complex | 7 | 100.0× | 1e-11 |
| SARS-CoV-1 targets host intracellular signalling and regulatory pathways | 7 | 100.0× | 1e-11 |
| Activation of BH3-only proteins | 7 | 74.0× | 1e-10 |
| RHO GTPases activate PKNs | 10 | 67.5× | 4e-14 |
| Intrinsic Pathway for Apoptosis | 7 | 43.6× | 5e-09 |
| Translocation of SLC2A4 (GLUT4) to the plasma membrane | 11 | 36.1× | 9e-13 |
| FOXO-mediated transcription | 5 | 35.7× | 3e-06 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| protein targeting | 5 | 27.8× | 2e-04 |
| intracellular protein localization | 8 | 12.7× | 1e-04 |
| exocytosis | 5 | 11.5× | 9e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
326 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 3 |
| Likely pathogenic | 0 |
| Uncertain significance | 213 |
| Likely benign | 21 |
| Benign | 34 |
Top pathogenic / likely-pathogenic (3)
| Variant ID | HGVS | Classification |
|---|---|---|
| 2664953 | NM_017672.6(TRPM7):c.2999T>C (p.Met1000Thr) | Pathogenic |
| 2664954 | NM_017672.6(TRPM7):c.3242T>G (p.Leu1081Arg) | Pathogenic |
| 974783 | NM_017672.6(TRPM7):c.3137G>A (p.Gly1046Asp) | Pathogenic |
SpliceAI
6192 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 15:50570162:A:C | acceptor_gain | 1.0000 |
| 15:50570164:G:C | acceptor_gain | 1.0000 |
| 15:50570164:G:GC | acceptor_gain | 1.0000 |
| 15:50570166:G:C | acceptor_gain | 1.0000 |
| 15:50570166:G:GC | acceptor_gain | 1.0000 |
| 15:50570168:A:C | acceptor_gain | 1.0000 |
| 15:50570170:A:C | acceptor_gain | 1.0000 |
| 15:50574298:C:CA | donor_gain | 1.0000 |
| 15:50574299:C:A | donor_gain | 1.0000 |
| 15:50574481:T:C | acceptor_gain | 1.0000 |
| 15:50574850:A:AC | donor_gain | 1.0000 |
| 15:50574851:C:CC | donor_gain | 1.0000 |
| 15:50574851:CT:C | donor_gain | 1.0000 |
| 15:50574851:CTCT:C | donor_gain | 1.0000 |
| 15:50575787:CAG:C | acceptor_gain | 1.0000 |
| 15:50575790:C:CC | acceptor_gain | 1.0000 |
| 15:50575794:A:C | acceptor_gain | 1.0000 |
| 15:50586489:C:CC | acceptor_gain | 1.0000 |
| 15:50589584:TTAC:T | donor_loss | 1.0000 |
| 15:50589585:TAC:T | donor_loss | 1.0000 |
| 15:50589586:AC:A | donor_loss | 1.0000 |
| 15:50589588:TTACG:T | donor_loss | 1.0000 |
| 15:50589589:T:TG | donor_loss | 1.0000 |
| 15:50589590:A:AC | donor_gain | 1.0000 |
| 15:50589590:A:C | donor_loss | 1.0000 |
| 15:50589591:C:CA | donor_loss | 1.0000 |
| 15:50589591:C:CT | donor_gain | 1.0000 |
| 15:50589591:CG:C | donor_gain | 1.0000 |
| 15:50589591:CGG:C | donor_gain | 1.0000 |
| 15:50589591:CGGA:C | donor_gain | 1.0000 |
AlphaMissense
12379 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 15:50574436:A:G | W1716R | 1.000 |
| 15:50574436:A:T | W1716R | 1.000 |
| 15:50592522:A:G | L1238P | 1.000 |
| 15:50593706:A:C | F1173L | 1.000 |
| 15:50593706:A:T | F1173L | 1.000 |
| 15:50593707:A:G | F1173S | 1.000 |
| 15:50593708:A:G | F1173L | 1.000 |
| 15:50593716:A:G | L1170P | 1.000 |
| 15:50594571:C:A | W1111C | 1.000 |
| 15:50594571:C:G | W1111C | 1.000 |
| 15:50594573:A:G | W1111R | 1.000 |
| 15:50594573:A:T | W1111R | 1.000 |
| 15:50596270:A:G | L1092P | 1.000 |
| 15:50596270:A:T | L1092H | 1.000 |
| 15:50596273:A:G | L1091P | 1.000 |
| 15:50596275:A:C | N1090K | 1.000 |
| 15:50596275:A:T | N1090K | 1.000 |
| 15:50596303:A:G | L1081P | 1.000 |
| 15:50599148:C:A | G1046V | 1.000 |
| 15:50599149:C:A | G1046C | 1.000 |
| 15:50599149:C:G | G1046R | 1.000 |
| 15:50599175:A:T | V1037D | 1.000 |
| 15:50599241:C:T | G1015D | 1.000 |
| 15:50599242:C:G | G1015R | 1.000 |
| 15:50599246:A:C | S1013R | 1.000 |
| 15:50599246:A:T | S1013R | 1.000 |
| 15:50599248:T:G | S1013R | 1.000 |
| 15:50599265:A:C | M1007R | 1.000 |
| 15:50599265:A:T | M1007K | 1.000 |
| 15:50604895:C:G | G987R | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000038635 (15:50616468 C>T), RS1000057210 (15:50677707 C>A), RS1000066824 (15:50577557 C>T), RS1000080903 (15:50641107 G>A), RS1000100744 (15:50602873 G>A), RS1000106757 (15:50569595 C>T), RS1000134546 (15:50654314 G>T), RS1000160383 (15:50608503 T>C), RS1000168810 (15:50581955 T>C,G), RS1000179886 (15:50611727 A>T), RS1000180877 (15:50579581 T>TA), RS1000187615 (15:50647113 C>T), RS1000211793 (15:50608059 AAAAAAAAAAAAG>A), RS1000221819 (15:50621302 G>A,T), RS1000230665 (15:50572865 A>G)
Disease associations
OMIM: gene MIM:605692 | disease phenotypes: MIM:105500, MIM:602014
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| familial primary hypomagnesemia | Strong | Autosomal dominant |
| hypomagnesemia, seizures, and intellectual disability | Moderate | Autosomal dominant |
| sudden arrhythmia death syndrome | Moderate | Autosomal dominant |
| autosomal dominant macrothrombocytopenia | Supportive | Autosomal dominant |
| macrothrombocytopenia, isolated | Limited | Autosomal dominant |
| amyotrophic lateral sclerosis-parkinsonism-dementia complex | Limited | Unknown |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| macrothrombocytopenia, isolated | Moderate | AD |
Mondo (8): amyotrophic lateral sclerosis-parkinsonism-dementia complex (MONDO:0007104), juvenile amyotrophic lateral sclerosis (MONDO:0017593), intestinal hypomagnesemia 1 (MONDO:0011176), hypomagnesemia, seizures, and intellectual disability (MONDO:0014631), macrothrombocytopenia, isolated (MONDO:0031447), autosomal dominant macrothrombocytopenia (MONDO:0015372), familial primary hypomagnesemia (MONDO:0018100), sudden arrhythmia death syndrome (MONDO:0054866)
Orphanet (3): Parkinson-dementia complex of Guam (Orphanet:90020), Juvenile amyotrophic lateral sclerosis (Orphanet:300605), Primary hypomagnesemia with secondary hypocalcemia (Orphanet:30924)
HPO phenotypes
21 total (21 of 21 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000421 | Epistaxis |
| HP:0000726 | Dementia |
| HP:0000978 | Bruising susceptibility |
| HP:0001283 | Bulbar palsy |
| HP:0001300 | Parkinsonism |
| HP:0001324 | Muscle weakness |
| HP:0001873 | Thrombocytopenia |
| HP:0002059 | Cerebral atrophy |
| HP:0002366 | Abnormal lower motor neuron morphology |
| HP:0003394 | Muscle spasm |
| HP:0003470 | Paralysis |
| HP:0003584 | Late onset |
| HP:0003596 | Middle age onset |
| HP:0004846 | Prolonged bleeding after surgery |
| HP:0006298 | Prolonged bleeding after dental extraction |
| HP:0007354 | Amyotrophic lateral sclerosis |
| HP:0011877 | Increased mean platelet volume |
| HP:0032438 | Platelet anisocytosis |
| HP:0040185 | Macrothrombocytopenia |
| HP:0100608 | Metrorrhagia |
GWAS associations
13 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST002500_74 | QT interval | 3.000000e-12 |
| GCST005982_8 | Calcium levels | 3.000000e-12 |
| GCST007096_123 | Pulse pressure | 1.000000e-09 |
| GCST007097_80 | Pulse pressure | 3.000000e-06 |
| GCST007099_166 | Systolic blood pressure | 6.000000e-07 |
| GCST007692_33 | Chronic obstructive pulmonary disease | 9.000000e-07 |
| GCST009524_95 | Household income (MTAG) | 2.000000e-08 |
| GCST011010_63 | Electrocardiographic traits (multivariate) | 2.000000e-06 |
| GCST012676_6 | Body composition traits | 5.000000e-06 |
| GCST012676_7 | Body composition traits | 6.000000e-08 |
| GCST012676_8 | Body composition traits | 1.000000e-08 |
| GCST90013663_56 | Alanine aminotransferase levels | 1.000000e-08 |
| GCST90013664_86 | Aspartate aminotransferase levels | 5.000000e-12 |
EFO canonical traits (8, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004682 | QT interval |
| EFO:0004838 | calcium measurement |
| EFO:0005763 | pulse pressure measurement |
| EFO:0006335 | systolic blood pressure |
| EFO:0009695 | household income |
| EFO:0004327 | electrocardiography |
| EFO:0004340 | body mass index |
| EFO:0004736 | aspartate aminotransferase measurement |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| C566593 | Hypomagnesemia 1, Intestinal (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL1250412 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: enzyme — ChaK subfamily
Most potent curated ligand interactions (9 total), top 9:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| sphingosine | Inhibition | 6.23 | pIC50 |
| fingolimod | Inhibition | 6.14 | pIC50 |
| NS8593 | Inhibition | 5.8 | pIC50 |
| spermine | Inhibition | 5.64 | pKi |
| waixenicin A | Inhibition | 5.15 | pIC50 |
| H+ | Potentiation | 4.5 | pEC50 |
| carvacrol | Inhibition | 3.52 | pIC50 |
| nafamostat | Inhibition | 3.21 | pIC50 |
| Mg2+ | Antagonist | 2.49 | pIC50 |
ChEMBL bioactivities
2 potent at pChembl≥5 of 2 total, top 2 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 7.05 | IC50 | 90 | nM | CHEMBL5423236 |
| 5.57 | IC50 | 2700 | nM | CANNABIGEROLIC ACID |
PubChem BioAssay actives
2 with measured affinity, of 25 total; 2 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| [(E,5S)-5-[(1R,4aS,7E,10R,11aR)-1-acetyloxy-10-hydroxy-7-methyl-11-methylidene-4a,5,6,9,10,11a-hexahydro-1H-cyclonona[c]pyran-4-yl]-5-acetyloxy-2-methylpent-2-enyl] acetate | 2035477: Inhibition of human TRPM7 transfected in Tet-inducible HEK293-T-REx cells assessed as inhibition of channel current in presence of 780 uM intracellular Mg2+ by whole cell patch clamp analysis | ic50 | 0.0900 | uM |
| 3-[(2E)-3,7-dimethylocta-2,6-dienyl]-2,4-dihydroxy-6-pentylbenzoic acid | 2035471: Inhibition of human TRPM7 transfected in HEK293 cells assessed as inhibition of channel current by whole cell patch clamp analysis | ic50 | 2.7000 | uM |
CTD chemical–gene interactions
44 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Magnesium | decreases reaction, increases abundance, decreases abundance, affects cotreatment, affects response to substance | 3 |
| bisphenol A | decreases expression, increases expression, affects cotreatment | 2 |
| Air Pollutants | affects cotreatment, increases abundance, increases oxidation, decreases expression | 2 |
| bisphenol F | affects cotreatment, decreases expression | 1 |
| methylmercuric chloride | increases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| alpha-pinene | increases abundance, affects cotreatment, increases oxidation | 1 |
| methylparaben | increases expression | 1 |
| potassium chromate(VI) | decreases expression | 1 |
| 1-nitropyrene | increases expression | 1 |
| methacrylaldehyde | affects cotreatment, increases oxidation, increases abundance | 1 |
| glycidamide | increases expression | 1 |
| perfluorooctane sulfonic acid | decreases expression | 1 |
| U 0126 | decreases reaction, affects reaction, decreases expression | 1 |
| K 7174 | increases expression | 1 |
| (R)-N-(benzimidazol-2-yl)-1,2,3,4-tetrahydro-1-naphthylamine | affects reaction, increases activity | 1 |
| bisphenol S | affects cotreatment, decreases expression | 1 |
| jinfukang | decreases expression | 1 |
| Sunitinib | increases expression | 1 |
| Acrolein | affects cotreatment, increases oxidation, increases abundance | 1 |
| Cadmium | increases activity, increases expression, affects uptake | 1 |
| Calcium | decreases reaction, increases abundance | 1 |
| Calcium, Dietary | affects cotreatment, affects response to substance | 1 |
| Dexamethasone | affects cotreatment, decreases expression | 1 |
| Diuron | decreases expression | 1 |
| Doxorubicin | decreases expression | 1 |
| Ethyl Methanesulfonate | increases expression | 1 |
| Glucose | increases activity, increases expression, affects reaction, decreases expression, decreases reaction | 1 |
| Hydrogen Peroxide | affects cotreatment, increases expression | 1 |
| Indomethacin | affects cotreatment, decreases expression | 1 |
ChEMBL screening assays
34 unique, capped per target: 34 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1252891 | Binding | Induction of TRPM7 S-nitrosylation in HEK cells assessed as increase in Ca2+ level from extracellular space at 30 uM | Nitric oxide activates TRP channels by cysteine S-nitrosylation. — Nat Chem Biol |
Cellosaurus cell lines
4 cell lines: 4 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B2JS | Abcam HeLa TRPM7 KO | Cancer cell line | Female |
| CVCL_D8D6 | Ubigene A-549 TRPM7 KO | Cancer cell line | Male |
| CVCL_E0SB | Ubigene HeLa TRPM7 KO | Cancer cell line | Female |
| CVCL_TU87 | HAP1 TRPM7 (-) | Cancer cell line | Male |
Clinical trials (associated diseases)
33 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00282620 | PHASE4 | UNKNOWN | Magnesium to Reduce Implantable Cardioverter Defibrillator (ICD) Shocks and Improve Patient’s Quality of Life. |
| NCT00603499 | PHASE4 | COMPLETED | Magnesium and Metabolic Syndrome |
| NCT00994006 | PHASE4 | COMPLETED | The Absorption of Magnesium Oxide Compared to Citrate in Healthy Subjects |
| NCT03088852 | PHASE4 | RECRUITING | Magnesium Deficiency In Patients Hospitalized in Internal Medicine Wards |
| NCT03812380 | PHASE3 | TERMINATED | Averting Complications of Proton Pump Inhibitor Therapy by Effervescent Calcium Magnesium Citrate |
| NCT05998863 | PHASE3 | RECRUITING | EffCaMgCit to Prevent Mineral Metabolism and Renal Complications of Chronic PPI Therapy |
| NCT04675073 | PHASE3 | UNKNOWN | Preventive VT Substrate Ablation in Ischemic Heart Disease |
| NCT02216877 | PHASE1/PHASE2 | COMPLETED | Magnesium Supplementation for Hypomagnesemia in Chronic Kidney Disease |
| NCT04382157 | PHASE1/PHASE2 | UNKNOWN | Magnesium Replacement and Hyperglycemia After Kidney Transplantation |
| NCT01700998 | Not specified | COMPLETED | Magnesium Replacement Therapy to Prevent Acute Renal Failure in Critically Ill Patients |
| NCT02690012 | Not specified | COMPLETED | Feasibility of Using an Integrated Consent Model to Compare Two Standard of Care Regimens for the Management of Hypomagnesemia From Anti-Cancer Therapies |
| NCT03976440 | Not specified | UNKNOWN | Simplified Regional Citrate Anticoagulation Protocols for CVVH, CVVHDF and SLED: a Pilot Study |
| NCT04351451 | Not specified | COMPLETED | Hypomagnesemia and Hypocalcemia Association Following Thyroidectomy |
| NCT04426994 | Not specified | COMPLETED | Hypomagnesemia Associated With Proton-Pump Inhibitor Use |
| NCT06353750 | Not specified | UNKNOWN | Intracellular Magnesium and Heart Failure |
| NCT06855550 | Not specified | COMPLETED | Postoperative Incidence of Atrial Fibrillation Following Cardiac Surgery |
| NCT07056283 | Not specified | RECRUITING | The Study of Urinary Biomarkers in Patients With Hypomagnesemia |
| NCT07089004 | Not specified | COMPLETED | Hypomagnesemia and Its Clinical Outcome |
| NCT07380542 | Not specified | COMPLETED | Dynamic Magnesium Replacement Strategies and 28-Day Mortality in Non-Cardiac Critically Ill Patients With Hypomagnesemia: A Target Trial Emulation |
| NCT07576621 | Not specified | COMPLETED | Association Between Hypomagnesemia and Coagulopathy in Sepsis |
| NCT04189822 | Not specified | ENROLLING_BY_INVITATION | Hearts in Rhythm Organization (HiRO)National Registry and Bio Bank |
| NCT04246450 | Not specified | UNKNOWN | Arrhythmic Risk Stratification in Nonischemic Dilated Cardiomyopathy |
| NCT04548804 | Not specified | UNKNOWN | Better Mechanistic Understanding of and Risk Stratification for Ventricular Tachyarrhythmias Through ECGI |
| NCT04599439 | Not specified | UNKNOWN | CMR Based Prediction of Ventricular Tachycardia Events in Healed Myocardial Infarction (DEVELOP-VT) |
| NCT05799833 | Not specified | UNKNOWN | Low QRS Voltages in Young Healthy Individuals and Athletes |
| NCT06321900 | Not specified | UNKNOWN | Personalized Risk Prediction of Sudden Cardiac Death |
| NCT06739239 | Not specified | RECRUITING | French COhoRte Extra-Vascular Implantable CardiovErter DefibrillatoR |
| NCT06763549 | Not specified | ENROLLING_BY_INVITATION | COR-INSIGHT: Optimizing Cardiovascular and Cardiopulmonary Outcomes with AI-Driven Multiplexed Indications Using COR ECG Wearable |
| NCT06804499 | Not specified | RECRUITING | Tampere Coronary Artery Disease and Sudden Cardiac Arrest Study |
| NCT06888271 | Not specified | NOT_YET_RECRUITING | DNA Methylation in Brugada Syndrome and Risk of Sudden Cardiac Death |
| NCT07436962 | Not specified | RECRUITING | Loop Recorder Implantation in Patients With Mitral Annular Disjunction |
| NCT07545512 | Not specified | NOT_YET_RECRUITING | ODSSEY-SCD_Identification Of Markers to preDict the rISk of Sudden Cardiac Death in Moderated LVEF in ischEmic cardiomyopathY |
| NCT06065852 | Not specified | RECRUITING | National Registry of Rare Kidney Diseases |
Related Atlas pages
- Associated diseases: hypomagnesemia, seizures, and intellectual disability, macrothrombocytopenia, isolated, amyotrophic lateral sclerosis-parkinsonism-dementia complex, autosomal dominant macrothrombocytopenia, familial primary hypomagnesemia, sudden arrhythmia death syndrome
- Targeted by drugs: Fingolimod, Magnesium, Nafamostat
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): amyotrophic lateral sclerosis-parkinsonism-dementia complex, autosomal dominant macrothrombocytopenia, familial primary hypomagnesemia, hypomagnesemia, seizures, and intellectual disability, intestinal hypomagnesemia 1, juvenile amyotrophic lateral sclerosis, macrothrombocytopenia, isolated, sudden arrhythmia death syndrome