TSPAN5-AS1

Summary

TSPAN5-AS1 (TSPAN5 antisense RNA 1, HGNC:40817) is a long non-coding RNA gene on chromosome 4q23.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40817
Approved symbol	TSPAN5-AS1
Name	TSPAN5 antisense RNA 1
Location	4q23
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000251523
Ensembl biotype	lncRNA
Entrez	144093421

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000505408

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000505408 — 4 exons

Exon	Start	End
ENSE00002019520	98500178	98500271
ENSE00002040308	98496364	98496451
ENSE00002061298	98496525	98496697
ENSE00002063579	98509802	98509935

Expression profiles

Bgee: expression breadth ubiquitous, 111 present calls, max score 78.44.

Top tissues by expression

111 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	78.44	silver quality
corpus callosum	UBERON:0002336	75.72	gold quality
skeletal muscle tissue	UBERON:0001134	74.76	gold quality
cortical plate	UBERON:0005343	70.78	gold quality
bone marrow cell	CL:0002092	69.81	silver quality
ventricular zone	UBERON:0003053	67.83	gold quality
ganglionic eminence	UBERON:0004023	65.80	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	62.50	gold quality
colonic epithelium	UBERON:0000397	61.94	silver quality
lymph node	UBERON:0000029	60.95	gold quality
tonsil	UBERON:0002372	60.28	gold quality
bone marrow	UBERON:0002371	59.66	gold quality
islet of Langerhans	UBERON:0000006	58.41	gold quality
monocyte	CL:0000576	56.92	gold quality
gall bladder	UBERON:0002110	56.64	gold quality
right ovary	UBERON:0002118	56.47	gold quality
stromal cell of endometrium	CL:0002255	55.96	gold quality
ovary	UBERON:0000992	55.53	gold quality
right hemisphere of cerebellum	UBERON:0014890	55.43	gold quality
calcaneal tendon	UBERON:0003701	55.36	gold quality
adrenal tissue	UBERON:0018303	55.13	gold quality
cerebellum	UBERON:0002037	55.10	gold quality
cerebellar cortex	UBERON:0002129	55.01	gold quality
cerebellar hemisphere	UBERON:0002245	54.91	gold quality
left ovary	UBERON:0002119	54.66	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	54.64	gold quality
kidney	UBERON:0002113	54.38	gold quality
prefrontal cortex	UBERON:0000451	53.49	gold quality
primary visual cortex	UBERON:0002436	53.41	gold quality
blood	UBERON:0000178	52.70	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.61

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.