TTL
gene geneOn this page
Also known as MGC46235
Summary
TTL (tubulin tyrosine ligase, HGNC:21586) is a protein-coding gene on chromosome 2q14.1, encoding Tubulin–tyrosine ligase (Q8NG68). Catalyzes the post-translational addition of a tyrosine to the C-terminal end of detyrosinated alpha-tubulin.
TTL is a cytosolic enzyme involved in the posttranslational modification of alpha-tubulin (see MIM 602529). Alpha-tubulin within assembled microtubules is detyrosinated over time at the C terminus. After microtubule disassembly, TTL restores the tyrosine residues and consequently participates in a cycle of tubulin detyrosination and tyrosination (Erck et al., 2003 [PubMed 14571137]).
Source: NCBI Gene 150465 — RefSeq curated summary.
At a glance
- Gene–disease (curated): complex neurodevelopmental disorder (Moderate, GenCC) — +1 more curated relationship
- Clinical variants (ClinVar): 51 total — 1 likely-pathogenic
- GTEx eGene: eQTL in 25 tissues, sQTL in 14 (q < 0.05)
- Constraint (gnomAD): pLI 1.00 (loss-of-function intolerant), LOEUF 0.42 (moderately constrained)
- MANE Select transcript:
NM_153712 - Notable: 51 clinical variants but no curated precision-oncology (CIViC) evidence yet
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:21586 |
| Approved symbol | TTL |
| Name | tubulin tyrosine ligase |
| Location | 2q14.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | MGC46235 |
| Ensembl gene | ENSG00000114999 |
| Ensembl biotype | protein_coding |
| OMIM | 608291 |
| Entrez | 150465 |
Gene structure
Transcript identifiers
Ensembl transcripts: 23 — 11 protein_coding, 9 nonsense_mediated_decay, 2 protein_coding_CDS_not_defined, 1 retained_intron
MANE Select: ENST00000233336
Transcript support level (Ensembl TSL; 1 = fully mRNA-supported): TSL 1: 1, TSL 2: 1, TSL 3: 2
ENST00000233336, ENST00000460450, ENST00000476615, ENST00000485537, ENST00000901134, ENST00000920102, ENST00000961587, ENST00000961588, ENST00001014341, ENST00001014342, ENST00001014343, ENST00001014344, ENST00001014345, ENST00001014346, ENST00001068540, ENST00001127858, ENST00001127859, ENST00001127860, ENST00001127861, ENST00001127862, ENST00001127863, ENST00001127864, ENST00001142757
RefSeq mRNA: 2 — MANE Select: NM_153712
NM_001371712, NM_153712
CCDS: CCDS2096
Canonical transcript exons
ENST00000233336 — 7 exons
| Exon | Start | End |
|---|---|---|
| ENSE00000773823 | 112501206 | 112501341 |
| ENSE00001128757 | 112520282 | 112520425 |
| ENSE00001181380 | 112494143 | 112494375 |
| ENSE00001181382 | 112485917 | 112485995 |
| ENSE00001249738 | 112482156 | 112482501 |
| ENSE00001366598 | 112528681 | 112541739 |
| ENSE00003583817 | 112502912 | 112503181 |
Expression profiles
Bgee: expression breadth ubiquitous, 255 present calls, max score 96.82.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 20.0598 / max 135.6369, expressed in 1812 samples.
Highest expression (Bgee): dorsal root ganglion, cortical plate, ventricle myocardium, trigeminal ganglion, ganglionic eminence.
Genetic regulation across tissues (GTEx eQTL / sQTL)
TTL is an eGene in GTEx v10 — its expression is genetically regulated (eQTL) in 25 tissues and its splicing (sQTL) in 14 (q < 0.05). Strongest associations first; slope = normalized effect of the lead variant’s alternative allele.
showing 20 of 39 significant tissue × QTL associations:
| Tissue | QTL | q-value | Slope | Lead variant |
|---|---|---|---|---|
| Skin Sun Exposed Lower leg | eqtl | 2.8e-23 | -0.32 | 2:112513832:C:A |
| Skin Not Sun Exposed Suprapubic | eqtl | 1.0e-17 | -0.26 | 2:112497637:T:G |
| Muscle Skeletal | eqtl | 1.6e-15 | -0.19 | 2:112482606:T:C |
| Cells Cultured fibroblasts | sqtl | 8.5e-12 | -0.53 | 2:112520372:T:C |
| Muscle Skeletal | sqtl | 6.4e-11 | -0.58 | 2:112520372:T:C |
| Esophagus Muscularis | sqtl | 8.5e-09 | -0.48 | 2:112536721:C:T |
| Heart Atrial Appendage | eqtl | 1.7e-08 | -0.23 | 2:112482606:T:C |
| Esophagus Gastroesophageal Junction | eqtl | 4.4e-08 | -0.22 | 2:112501339:C:T |
| Nerve Tibial | eqtl | 1.0e-07 | -0.70 | 2:112526988:G:T |
| Esophagus Muscularis | eqtl | 3.3e-07 | -0.19 | 2:112513832:C:A |
| Heart Left Ventricle | eqtl | 1.5e-06 | -0.17 | 2:112476739:C:T |
| Brain Spinal cord cervical c-1 | eqtl | 3.9e-05 | -0.23 | 2:112520613:T:TTGTA |
| Brain Caudate basal ganglia | eqtl | 6.6e-05 | +0.16 | 2:112526767:T:A |
| Brain Cortex | sqtl | 8.5e-05 | -0.63 | 2:112520734:C:A |
| Thyroid | sqtl | 8.7e-05 | -0.36 | 2:112536721:C:T |
| Brain Hippocampus | eqtl | 9.0e-05 | +0.18 | 2:112564323:T:C |
| Brain Putamen basal ganglia | eqtl | 9.3e-05 | -0.19 | 2:112495675:G:A |
| Thyroid | eqtl | 1.3e-04 | -0.17 | 2:112531455:A:G |
| Artery Tibial | eqtl | 4.8e-04 | -0.10 | 2:112513832:C:A |
| Colon Transverse | eqtl | 1.1e-03 | -0.14 | 2:112476739:C:T |
FANTOM5 promoters
5 alternative TSS:
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 21982 | 14.4992 | 1805 |
| 21983 | 3.2875 | 1519 |
| 21981 | 1.9987 | 1281 |
| 202348 | 0.2529 | 90 |
| 21984 | 0.0216 | 7 |
Top tissues by expression
showing 100 of 256 tissues by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| dorsal root ganglion | UBERON:0000044 | 96.82 | gold quality |
| cortical plate | UBERON:0005343 | 95.69 | gold quality |
| left ventricle myocardium | UBERON:0006566 | 95.50 | gold quality |
| trigeminal ganglion | UBERON:0001675 | 94.93 | gold quality |
| ganglionic eminence | UBERON:0004023 | 94.49 | gold quality |
| medial globus pallidus | UBERON:0002477 | 94.41 | gold quality |
| globus pallidus | UBERON:0001875 | 93.46 | gold quality |
| middle temporal gyrus | UBERON:0002771 | 93.41 | gold quality |
| ventricular zone | UBERON:0003053 | 92.97 | gold quality |
| deltoid | UBERON:0001476 | 92.89 | gold quality |
| cardiac muscle of right atrium | UBERON:0003379 | 92.51 | silver quality |
| tendon of biceps brachii | UBERON:0008188 | 92.42 | gold quality |
| vastus lateralis | UBERON:0001379 | 92.26 | gold quality |
| tibialis anterior | UBERON:0001385 | 92.26 | silver quality |
| quadriceps femoris | UBERON:0001377 | 92.24 | gold quality |
| Brodmann (1909) area 46 | UBERON:0006483 | 92.16 | gold quality |
| gastrocnemius | UBERON:0001388 | 92.03 | gold quality |
| upper arm skin | UBERON:0004263 | 91.96 | gold quality |
| muscle of leg | UBERON:0001383 | 91.80 | gold quality |
| body of tongue | UBERON:0011876 | 91.55 | gold quality |
| stromal cell of endometrium | CL:0002255 | 91.45 | gold quality |
| prefrontal cortex | UBERON:0000451 | 91.35 | gold quality |
| skeletal muscle tissue | UBERON:0001134 | 91.25 | gold quality |
| corpus callosum | UBERON:0002336 | 91.19 | gold quality |
| putamen | UBERON:0001874 | 91.04 | gold quality |
| cartilage tissue | UBERON:0002418 | 91.02 | gold quality |
| muscle tissue | UBERON:0002385 | 90.63 | gold quality |
| skeletal muscle tissue of rectus abdominis | UBERON:0004511 | 90.15 | gold quality |
| superior vestibular nucleus | UBERON:0007227 | 90.08 | gold quality |
| myocardium | UBERON:0002349 | 90.04 | gold quality |
| biceps brachii | UBERON:0001507 | 89.95 | gold quality |
| frontal cortex | UBERON:0001870 | 89.92 | gold quality |
| secondary oocyte | CL:0000655 | 89.80 | gold quality |
| tongue | UBERON:0001723 | 89.70 | gold quality |
| Ammon’s horn | UBERON:0001954 | 89.67 | gold quality |
| amygdala | UBERON:0001876 | 89.61 | gold quality |
| caudate nucleus | UBERON:0001873 | 89.57 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 89.57 | gold quality |
| neocortex | UBERON:0001950 | 89.51 | gold quality |
| medulla oblongata | UBERON:0001896 | 89.48 | gold quality |
| temporal lobe | UBERON:0001871 | 89.46 | gold quality |
| cerebral cortex | UBERON:0000956 | 89.43 | gold quality |
| Brodmann (1909) area 23 | UBERON:0013554 | 89.34 | gold quality |
| dorsal plus ventral thalamus | UBERON:0001897 | 89.23 | gold quality |
| lateral globus pallidus | UBERON:0002476 | 89.11 | gold quality |
| nucleus accumbens | UBERON:0001882 | 89.09 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 88.92 | gold quality |
| gingival epithelium | UBERON:0001949 | 88.82 | gold quality |
| superior frontal gyrus | UBERON:0002661 | 88.76 | gold quality |
| inferior vagus X ganglion | UBERON:0005363 | 88.75 | gold quality |
| parietal lobe | UBERON:0001872 | 88.58 | gold quality |
| entorhinal cortex | UBERON:0002728 | 88.54 | gold quality |
| visceral pleura | UBERON:0002401 | 88.37 | gold quality |
| occipital lobe | UBERON:0002021 | 88.34 | gold quality |
| substantia nigra | UBERON:0002038 | 88.26 | gold quality |
| saphenous vein | UBERON:0007318 | 88.26 | gold quality |
| skeletal muscle tissue of biceps brachii | UBERON:0004502 | 88.20 | gold quality |
| forebrain | UBERON:0001890 | 88.19 | gold quality |
| midbrain | UBERON:0001891 | 88.08 | gold quality |
| right frontal lobe | UBERON:0002810 | 88.06 | gold quality |
| gingiva | UBERON:0001828 | 88.01 | gold quality |
| epithelial cell of pancreas | CL:0000083 | 88.00 | gold quality |
| substantia nigra pars reticulata | UBERON:0001966 | 87.99 | gold quality |
| islet of Langerhans | UBERON:0000006 | 87.93 | gold quality |
| postcentral gyrus | UBERON:0002581 | 87.87 | gold quality |
| parietal pleura | UBERON:0002400 | 87.74 | gold quality |
| subthalamic nucleus | UBERON:0001906 | 87.68 | gold quality |
| superior surface of tongue | UBERON:0007371 | 87.67 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 87.65 | gold quality |
| synovial joint | UBERON:0002217 | 87.63 | gold quality |
| substantia nigra pars compacta | UBERON:0001965 | 87.59 | gold quality |
| cardiac ventricle | UBERON:0002082 | 87.49 | gold quality |
| heart left ventricle | UBERON:0002084 | 87.46 | gold quality |
| layer of synovial tissue | UBERON:0007616 | 87.45 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 87.41 | gold quality |
| heart right ventricle | UBERON:0002080 | 87.38 | gold quality |
| primary visual cortex | UBERON:0002436 | 87.34 | gold quality |
| brain | UBERON:0000955 | 87.30 | gold quality |
| monocyte | CL:0000576 | 87.28 | gold quality |
| ventral tegmental area | UBERON:0002691 | 87.16 | gold quality |
| leukocyte | CL:0000738 | 86.99 | gold quality |
| lateral nuclear group of thalamus | UBERON:0002736 | 86.88 | gold quality |
| pharyngeal mucosa | UBERON:0000355 | 86.80 | gold quality |
| heart | UBERON:0000948 | 86.69 | gold quality |
| tendon | UBERON:0000043 | 86.54 | gold quality |
| kidney epithelium | UBERON:0004819 | 86.54 | silver quality |
| thymus | UBERON:0002370 | 86.11 | gold quality |
| skin of hip | UBERON:0001554 | 86.08 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 86.02 | gold quality |
| apex of heart | UBERON:0002098 | 86.01 | gold quality |
| germinal epithelium of ovary | UBERON:0001304 | 85.92 | gold quality |
| hypothalamus | UBERON:0001898 | 85.84 | gold quality |
| lung | UBERON:0002048 | 85.72 | gold quality |
| right lung | UBERON:0002167 | 85.47 | gold quality |
| cardiac atrium | UBERON:0002081 | 85.46 | gold quality |
| upper lobe of lung | UBERON:0008948 | 85.40 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 85.39 | gold quality |
| esophagus squamous epithelium | UBERON:0006920 | 85.30 | gold quality |
| right coronary artery | UBERON:0001625 | 85.15 | gold quality |
| endometrium | UBERON:0001295 | 85.11 | gold quality |
Single-cell (SCXA)
Detected in 3 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | yes | 5.40 |
| E-MTAB-6911 | no | 119.84 |
| E-GEOD-76312 | no | 97.53 |
HPA expression
RNA tissue specificity: Low tissue specificity
showing 60 of 70 HPA tissues / cells by nTPM:
| Tissue / cell | Axis | nTPM |
|---|---|---|
| Cerebral cortex | tissue | 42.5 |
| Somatosensory cortex | tissue | 42.5 |
| Occipital cortex | tissue | 41.3 |
| Frontal cortex | tissue | 38.0 |
| Basal ganglia | tissue | 37.4 |
| Caudate putamen | tissue | 37.4 |
| Retrosplenial and cingulate cortex | tissue | 31.5 |
| Ventral forebrain | tissue | 29.5 |
| Amygdala | tissue | 28.0 |
| Entorhinal cortex | tissue | 27.5 |
| Hippocampal formation | tissue | 22.6 |
| Corpus callosum | tissue | 17.8 |
| Pons | tissue | 17.3 |
| Thalamus | tissue | 16.5 |
| Septum | tissue | 16.2 |
| Midbrain | tissue | 16.1 |
| Hypothalamus | tissue | 15.6 |
| Olfactory bulb | tissue | 14.9 |
| Cerebellum | tissue | 13.3 |
| Putamen | tissue | 13.0 |
| Postcentral gyrus | tissue | 12.6 |
| Nucleus accumbens | tissue | 12.1 |
| Retrosplenial cortex | tissue | 12.0 |
| Hippocampus | tissue | 11.0 |
| Substantia nigra | tissue | 10.9 |
| Medulla oblongata | tissue | 10.8 |
| Locus coeruleus | tissue | 10.7 |
| Spinal cord | tissue | 9.4 |
| Choroid plexus | tissue | 7.8 |
| Skeletal muscle | tissue | 3.5 |
| Tongue | tissue | 3.5 |
| Bone marrow | tissue | 1.6 |
| Heart muscle | tissue | 1.5 |
| Skin 1 | tissue | 1.3 |
| Lung | tissue | 1.3 |
| Retina | tissue | 1.2 |
| Smooth muscle | tissue | 1.2 |
| Placenta | tissue | 1.1 |
| Esophagus | tissue | 1.0 |
| Gallbladder | tissue | 1.0 |
| Lymph node | tissue | 0.9 |
| Adipose tissue | tissue | 0.9 |
| Urinary bladder | tissue | 0.9 |
| Endometrium 1 | tissue | 0.9 |
| Thymus | tissue | 0.9 |
| Appendix | tissue | 0.9 |
| Parathyroid gland | tissue | 0.8 |
| Epididymis | tissue | 0.8 |
| Thyroid gland | tissue | 0.8 |
| Spleen | tissue | 0.8 |
| Rectum | tissue | 0.7 |
| Pancreas | tissue | 0.7 |
| Kidney | tissue | 0.7 |
| Adrenal gland | tissue | 0.7 |
| Tonsil | tissue | 0.7 |
| Seminal vesicle | tissue | 0.6 |
| Colon | tissue | 0.6 |
| Small intestine | tissue | 0.6 |
| Duodenum | tissue | 0.6 |
| Cervix | tissue | 0.5 |
Brain sub-regions (HPA Brain Atlas): detected in 185; highest nTPM — White matter (17.8), Temporal white matter (14.4), Somatosensory cortex, postcentral gyrus, ventral (white matter) (13.7), Claustrum (13.4), Area striata (white matter) (13.3).
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
Targeting TTL by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific).
showing 30 of 144 miRNAs:
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4673 | 100.00 | 66.64 | 1490 |
| HSA-MIR-6873-3P | 100.00 | 71.42 | 2626 |
| HSA-MIR-7110-3P | 100.00 | 73.18 | 2486 |
| HSA-MIR-6833-3P | 100.00 | 70.63 | 3197 |
| HSA-MIR-4768-5P | 100.00 | 69.49 | 2861 |
| HSA-MIR-3925-3P | 100.00 | 69.95 | 1237 |
| HSA-MIR-4692 | 100.00 | 67.32 | 2066 |
| HSA-MIR-4795-3P | 100.00 | 74.62 | 4024 |
| HSA-MIR-4476 | 100.00 | 68.18 | 2030 |
| HSA-MIR-4533 | 100.00 | 69.48 | 2758 |
| HSA-MIR-4282 | 99.99 | 75.36 | 6408 |
| HSA-MIR-4500 | 99.99 | 72.72 | 2367 |
| HSA-MIR-4514 | 99.99 | 67.10 | 1870 |
| HSA-MIR-1184 | 99.99 | 68.19 | 1458 |
| HSA-MIR-4645-5P | 99.98 | 65.81 | 1284 |
| HSA-LET-7A-5P | 99.98 | 72.29 | 1790 |
| HSA-LET-7B-5P | 99.98 | 72.31 | 1790 |
| HSA-LET-7C-5P | 99.98 | 72.29 | 1790 |
| HSA-LET-7E-5P | 99.98 | 72.29 | 1790 |
| HSA-LET-7F-5P | 99.98 | 72.56 | 1784 |
| HSA-LET-7G-5P | 99.98 | 72.37 | 1784 |
| HSA-LET-7I-5P | 99.98 | 72.37 | 1788 |
| HSA-MIR-98-5P | 99.98 | 72.33 | 1787 |
| HSA-MIR-548N | 99.98 | 71.94 | 4170 |
| HSA-MIR-12136 | 99.98 | 72.81 | 5713 |
| HSA-LET-7D-5P | 99.96 | 71.76 | 1632 |
| HSA-MIR-4458 | 99.96 | 71.64 | 1650 |
| HSA-MIR-590-3P | 99.96 | 74.34 | 6478 |
| HSA-MIR-2110 | 99.96 | 66.68 | 1930 |
| HSA-MIR-4725-3P | 99.96 | 69.53 | 2520 |
Functional genomics
gnomAD constraint: pLI 0.999, LOEUF 0.423, missense Z 1.78 — population loss-of-function intolerance (pLI ≥ 0.9 = LoF-intolerant; lower LOEUF = more constrained). gnomAD
Regional missense constraint (gnomAD RMC): no regional variation along ENST00000233336 — one region, missense o/e 0.80.
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | ttl | ENSDARG00000062418 |
| mus_musculus | Ttl | ENSMUSG00000027394 |
| rattus_norvegicus | Ttl | ENSRNOG00000018205 |
Mouse-model phenotypes
Observed phenotypes of the mouse ortholog (MGI:1916987) from MGI (Alliance of Genome Resources) — knockout/mutant phenotypes, ranked by annotation count. 12 distinct phenotype terms.
| Mouse phenotype (MP) | Records |
|---|---|
| abnormal telencephalon development | 1 |
| ataxia | 1 |
| decreased exploration in new environment | 1 |
| edema | 1 |
| abnormal breathing pattern | 1 |
| abnormal forebrain development | 1 |
| abnormal bone structure | 1 |
| absent brain internal capsule | 1 |
| abnormal neuron differentiation | 1 |
| neonatal lethality, complete penetrance | 1 |
| preweaning lethality, complete penetrance | 1 |
| disorganized cerebral cortex lamination | 1 |
Additional cross-species homologs
Sequence homologs in species beyond Ensembl Compara’s model organisms, by Diamond local protein alignment (% sequence identity; best hit per species). Lower-identity rows are more distant homologs. The matched accessions’ gene symbols aren’t in biobtree yet, so each row shows the UniProt accession.
| Organism | UniProt | Identity | Method |
|---|---|---|---|
| Bos taurus | Q0VC71 | 97.2% | Diamond |
| Pongo abelii | Q5R978 | 96.8% | Diamond |
| Chlorocebus aethiops | Q6EEF3 | 94.1% | Diamond |
| Sus scrofa | P38160 | 93.1% | Diamond |
| Xenopus tropicalis | B2GUB3 | 58.6% | Diamond |
| Tetrahymena thermophila SB210 | Q23K29 | 47.8% | Diamond |
| Schizosaccharomyces pombe 972h- | Q10438 | 46.9% | Diamond |
| Drosophila melanogaster | Q9VM91 | 37.0% | Diamond |
Genomic neighbors (locus context)
Genes flanking this one on the chromosome (NCBI/Entrez gene neighborhood). Positional context only — some neighbors share regulatory elements (bidirectional promoters, antisense/overlapping transcripts), but chromosomal adjacency is not itself a functional relationship (see Interactions for that).
| Symbol | Type | Entrez |
|---|---|---|
| POLR1B | protein-coding | 84172 |
| CHCHD5 | protein-coding | 84269 |
| RGPD8 | protein-coding | 727851 |
| ZC3H6 | protein-coding | 376940 |
Protein
Protein identifiers
Tubulin–tyrosine ligase — Q8NG68 (reviewed: Q8NG68)
All UniProt accessions (1): Q8NG68
UniProt curated annotations — full annotation on UniProt →
Function. Catalyzes the post-translational addition of a tyrosine to the C-terminal end of detyrosinated alpha-tubulin.
Subunit / interactions. Monomer.
Similarity. Belongs to the tubulin–tyrosine ligase family.
RefSeq proteins (2): NP_001358641, NP_714923* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR004344 | TTL/TTLL_fam | Family |
| IPR052492 | Tubulin-tyrosine_ligase | Family |
Pfam: PF03133
Enzyme classification (BRENDA)
- EC 6.3.2.25 — tubulin-tyrosine ligase (BRENDA: 11 organisms, 35 substrates, 25 inhibitors, 12 Km, 0 kcat entries)
Substrate kinetics (BRENDA)
9 substrates with measured Km, best-characterized 9. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| L-TYR | 0.017–0.045 | 3 |
| L-PHE | 0.432–2.9 | 2 |
| ALPHA-TUBULIN | 0.002 | 1 |
| ATP | 0.014 | 1 |
| L-DOPA | 0.186 | 1 |
| L-HYDROXYPHENYLALANINE | 0.16 | 1 |
| L-TYROSINE | 0.0068 | 1 |
| TYRAMINE | 8 | 1 |
| UNTYROSINATED TUBULIN | 0.0019 | 1 |
Catalyzed reactions (Rhea)
- C-terminal L-alpha-aminoacyl-L-glutamyl-L-glutamyl-[tubulin] + L-tyrosine + ATP = C-terminal L-alpha-aminoacyl-L-glutamyl-L-glutamyl-L-tyrosyl-[tubulin] + ADP + phosphate + H(+) (RHEA:17605)
UniProt features (42 total): strand 20, helix 15, turn 4, chain 1, domain 1, sequence conflict 1
Structure
Experimental structures (PDB)
1 structures by resolution:
| PDB | Title | Method | Resolution (Å) |
|---|---|---|---|
| 8ASN | Crystal structure of the apo human TTL in complex with tubulin-stathmin | X-RAY DIFFRACTION | 2.57 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q8NG68-F1 | 93.13 | 0.85 |
Human Protein Atlas
Protein class: Enzymes, ENZYME proteins, Ligase, Metabolic proteins, Predicted intracellular proteins
Protein evidence: Evidence at protein level
Subcellular location (HPA, imaging): vesicles; nucleoplasm
Antibody reliability (HPA): IF approved
Function
Pathways and Gene Ontology
Reactome pathways
0 curated (TAS) of 3; 0 disease pathways. Curated-first; evidence = TAS (manually curated) vs IEA (electronic inference).
3 pathways:
| ID | Pathway | Evidence |
|---|---|---|
| R-HSA-8955332 | Carboxyterminal post-translational modifications of tubulin | electronic |
| R-HSA-392499 | Metabolism of proteins | — |
| R-HSA-597592 | Post-translational protein modification | — |
MSigDB gene sets: 184 (showing top):
FXR_IR1_Q6, GCM_MAP4K4, GCM_PTPRD, RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_UP, GOBP_NEURON_PROJECTION_EXTENSION, RORA1_01, GOBP_REGULATION_OF_DEVELOPMENTAL_GROWTH, GOBP_CHROMOSOME_LOCALIZATION, GOBP_POSITIVE_REGULATION_OF_MITOTIC_CELL_CYCLE, GOBP_GROWTH, GOBP_NEUROGENESIS, TGACCTY_ERR1_Q2, GTGCCTT_MIR506, WEI_MYCN_TARGETS_WITH_E_BOX, GOBP_REGULATION_OF_ANATOMICAL_STRUCTURE_SIZE
GO Biological Process (5): microtubule cytoskeleton organization (GO:0000226), post-translational protein modification (GO:0043687), positive regulation of mitotic cell cycle (GO:0045931), regulation of metaphase plate congression (GO:0090235), protein modification process (GO:0036211)
GO Molecular Function (4): tubulin-tyrosine ligase activity (GO:0004835), ATP binding (GO:0005524), nucleotide binding (GO:0000166), ligase activity (GO:0016874)
GO Cellular Component (2): spindle microtubule (GO:0005876), microtubule (GO:0005874)
Reactome top-level categories
2 top-level categories:
| Category | Pathways |
|---|---|
| Post-translational protein modification | 1 |
| Metabolism of proteins | 1 |
GO top-level categories
22 GO namespaces:
| Category | Terms |
|---|---|
| cytoskeleton organization | 1 |
| microtubule-based process | 1 |
| protein modification process | 1 |
| mitotic cell cycle | 1 |
| regulation of mitotic cell cycle | 1 |
| positive regulation of cell cycle | 1 |
| regulation of localization | 1 |
| metaphase chromosome alignment | 1 |
| protein metabolic process | 1 |
| macromolecule modification | 1 |
| acid-amino acid ligase activity | 1 |
| catalytic activity, acting on a protein | 1 |
| adenyl ribonucleotide binding | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| anion binding | 1 |
| nucleoside phosphate binding | 1 |
| heterocyclic compound binding | 1 |
| catalytic activity | 1 |
| spindle | 1 |
| microtubule | 1 |
| microtubule cytoskeleton | 1 |
| polymeric cytoskeletal fiber | 1 |
Experimentally-supported GO annotations
GO terms backed by direct experimental evidence (ECO experimental codes) — 5 of 11 annotations. The rest are phylogenetic / computational / electronic (IEA).
5 experimentally-supported GO terms:
| GO term | NS | Evidence |
|---|---|---|
| positive regulation of mitotic cell cycle | BP | mutant phenotype |
| post-translational protein modification | BP | mutant phenotype |
| regulation of metaphase plate congression | BP | mutant phenotype |
| spindle microtubule | CC | direct assay |
| tubulin-tyrosine ligase activity | MF | mutant phenotype |
Protein interactions and networks
STRING
showing 15 of 480 interactions by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| TTL | CLIP1 | P30622 | 850 |
| TTL | SVBP | Q8N300 | 836 |
| TTL | VASH1 | Q7L8A9 | 742 |
| TTL | VASH2 | Q86V25 | 711 |
| TTL | TTLL12 | Q14166 | 656 |
| TTL | AGBL4 | Q5VU57 | 614 |
| TTL | AGTPBP1 | Q9UPW5 | 610 |
| TTL | ATAT1 | Q5SQI0 | 609 |
| TTL | AGBL5 | Q8NDL9 | 585 |
| TTL | TTLL5 | Q6EMB2 | 536 |
| TTL | TTLL4 | Q14679 | 498 |
| TTL | CPXM2 | Q8N436 | 497 |
| TTL | CCSAP | Q6IQ19 | 477 |
| TTL | CCDC81 | Q6ZN84 | 456 |
| TTL | ZNF142 | P52746 | 444 |
IntAct
Human interaction partners of TTL in IntAct, one row per partner (best MIscore; records = supporting IntAct interaction records).
2 partners by confidence:
| Partner | Interaction type | MIscore | Records |
|---|---|---|---|
| SLC2A1 | physical association | 0.400 | 1 |
| CST4 | association | 0.350 | 1 |
BioGRID (25 interactions; top human partners by supporting records): TSC22D4 (Affinity Capture-MS; 3 records), LCP1 (Affinity Capture-MS; 2 records), MARVELD2 (Affinity Capture-MS; 2 records), POMC (Affinity Capture-MS; 2 records), ALOX15B (Co-fractionation), AMY1C (Affinity Capture-MS), CST4 (Affinity Capture-MS), ELAVL1 (Affinity Capture-RNA), GNA11 (Co-fractionation), IL17B (Affinity Capture-MS), NUDT21 (Affinity Capture-RNA), NXF1 (Affinity Capture-RNA), RCL1 (Affinity Capture-MS), RPA1 (Proximity Label-MS), RPA2 (Proximity Label-MS)
SIGNOR signaling
9 signaling interactions:
| A | Effect | B | Mechanism |
|---|---|---|---|
| TTL | down-regulates | TUBA1A | tyrosination |
| TTL | down-regulates | TUBA1B | tyrosination |
| TTL | down-regulates | TUBA1C | tyrosination |
| TTL | down-regulates | “TUBAC Family” | tyrosination |
| TTL | down-regulates | TUBA3E | tyrosination |
| TTL | down-regulates | TUBA4A | tyrosination |
| TTL | down-regulates | TUBA8 | tyrosination |
| STMN1 | down-regulates | TTL | binding |
| TTL | down-regulates | Tubulin | tyrosination |
Disease & clinical
Genetic variants
Variant evidence for TTL: 51 ClinVar records (1 pathogenic / likely pathogenic). Per-variant detail is on Sugi Variant.
ClinVar
51 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 1 |
| Uncertain significance | 32 |
| Likely benign | 1 |
| Benign | 4 |
Top pathogenic / likely-pathogenic (1)
Showing all 1 pathogenic / likely-pathogenic ClinVar records, ranked by ClinVar review status (expert panel → multiple submitters → single submitter), then by number of submitting labs.
| Variant ID | HGVS | Classification | Review | Submitters |
|---|---|---|---|---|
| 226183 | GRCh37/hg19 2q13(chr2:111186302-113273657) | Likely pathogenic | criteria provided, single submitter | 1 |
Per-variant reference — Sugi Variant
Explore TTL’s pathogenic and likely-pathogenic variants individually — each with its ClinVar classification and conditions, applied ACMG criteria (ClinGen expert panel, where curated), the calibrated in-silico predictors (AlphaMissense, REVEL, SaProt, conservation), gnomAD frequency, and the predictor-disagreement QC signal — on Sugi Variant.
SpliceAI
Top 10 splice-impact sites by Δscore (adjacent positions with the same effect merged into one range; 36 predictions of 961):
| Position(s) | Effect | Δscore | Sites |
|---|---|---|---|
| 2:112482502–112482503 | donor_loss | 1.0000 | 5 |
| 2:112520280–112520281 | acceptor_loss | 1.0000 | 6 |
| 2:112482503 | donor_loss | 0.9900 | |
| 2:112501204–112501205 | acceptor_loss | 0.9900 | 6 |
| 2:112501342–112501344 | donor_loss | 0.9900 | 8 |
| 2:112503068 | donor_gain | 0.9900 | |
| 2:112503145 | donor_gain | 0.9900 | |
| 2:112483075 | donor_gain | 0.9800 | |
| 2:112483087 | donor_gain | 0.9800 | |
| 2:112485996–112485997 | donor_loss | 0.9800 | 6 |
AlphaMissense
1,190 missense substitutions predicted likely pathogenic (of 2,480 scored), across 255 residues. Top 20 hotspot residues, ranked by the number of likely-pathogenic substitutions (of those reachable by a single-nucleotide change), then by mean score:
| Residue | Likely-pathogenic substitutions | Mean am_pathogenicity | Max am_pathogenicity |
|---|---|---|---|
| D200 | 8 | 0.999 | 0.999 |
| D318 | 8 | 0.999 | 1.000 |
| N242 | 8 | 0.996 | 1.000 |
| N333 | 8 | 0.991 | 0.999 |
| N63 | 8 | 0.985 | 1.000 |
| H239 | 8 | 0.984 | 0.998 |
| F199 | 8 | 0.975 | 0.999 |
| H243 | 8 | 0.975 | 0.997 |
| N260 | 8 | 0.971 | 0.998 |
| F312 | 8 | 0.970 | 0.998 |
| D126 | 8 | 0.954 | 0.992 |
| F37 | 8 | 0.948 | 0.999 |
| F49 | 8 | 0.944 | 0.999 |
| D208 | 8 | 0.943 | 0.996 |
| F317 | 8 | 0.942 | 0.998 |
| F319 | 8 | 0.937 | 0.998 |
| F131 | 8 | 0.935 | 0.998 |
| D8 | 8 | 0.934 | 0.986 |
| F315 | 8 | 0.931 | 0.997 |
| F359 | 8 | 0.923 | 0.995 |
HPA cancer prognostics
RNA cancer specificity: Low cancer specificity
Disease associations
OMIM: gene MIM:608291 | disease phenotypes:
GenCC curated gene-disease
2 curated gene-disease records:
| Disease | Classification | Inheritance | Records |
|---|---|---|---|
| complex neurodevelopmental disorder | Moderate | Autosomal recessive | |
| hypertrophic cardiomyopathy | Limited | Autosomal dominant |
Mondo (2): hypertrophic cardiomyopathy (MONDO:0005045), complex neurodevelopmental disorder (MONDO:0100038)
MeSH disease descriptors
1 disease descriptors:
| Descriptor | Name | Tree numbers |
|---|---|---|
| D002312 | Cardiomyopathy, Hypertrophic | C14.280.238.100; C14.280.484.048.750.070.160 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL5549 (SINGLE PROTEIN)
PharmGKB: 1 entry (CPIC guideline: no)
Binding affinities (BindingDB)
22 measured of 24 human assays (24 total across all organisms); most potent 22 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| 6alpha,8alpha-dihydroxy-23-carbossi-labd-13(14),17-dien-16,19-olide | KD | 7 nM | |
| 6alpha,8alpha,23-trihydroxy-labd-13(14),17-dien-16(R),19-olide | KD | 72 nM | |
| 8alpha-hydroxy,23alpha-O-ethyl-23,6alpha-epoxy-labd-13(14),17-dien-16(R),19-olide | KD | 73 nM | |
| 6alpha,8alpha-dihydroxy-23-carbossi-labd-13(14),15,17-trien-16,19-olide | KD | 93 nM | |
| 6alpha,8alpha,23-trihydroxy-labd-13(14),15,17-trien-16,19-olide | KD | 110 nM | |
| 8alpha-hydroxylabd-13(14),15,17-trien-6alpha,23-16,19-diolide | KD | 150 nM | |
| 6alpha,8alpha-dihydroxy-23-oxo-13(14),15,17-trien-16,19-olide | KD | 200 nM | |
| 8alpha-23-dihydroxy-23,6alpha-epoxy-labd-13(14),15,17-trien-16,19-olide | KD | 480 nM | |
| 6alpha,8alpha-dihydroxy-23-oxo-labd-13(14),17-dien-16(R),19-olide | KD | 810 nM | |
| 8alpha,15(S)-dihydroxy,23alpha-O-ethyl-23,6alpha-epoxy-labd-13(14),17-dien-16(S),19-olide | KD | 960 nM | |
| 6alpha,15(S),23-trihydroxy-labd-8(22),13(14),17-trien-16(S),19-olide | KD | 2000 nM | |
| 6alpha,8alpha,15(S)-trihydroxy-23-oxo-labd-13(14),17-dien-16(S),19-olide | KD | 3000 nM | |
| 6alpha,8alpha,15(S)-trihydroxy-23-carbossi-labd-13(14),17-dien-16(S),19-olide | KD | 3000 nM | |
| 6alpha,15(S)-dihydroxy-23-oxo-labd-8(22),13(14),17-trien-16(S),19-olide | KD | 3300 nM | |
| 6alpha,8alpha,15(S),23-tetrahydroxy-labd-13(14),17-dien-16(S),19-olide | KD | 4700 nM | |
| 6alpha,8alpha,15(S)-trihydroxy-23-carbossimethyllabd-13(14),17-dien-16(S),19-olide | KD | 6200 nM | |
| 23,6alpha-epoxy-labd-8,13(14),17-trien-16(R),19-olide | KD | 8700 nM | |
| (2S)-2-amino-3-(4-hydroxyphenyl)propanoic acid | IC50 | 100000 nM | US-20240415800 |
| 3-Aminotyrosine | KI | 200000 nM | |
| 3-Azidotyrosine | KI | 200000 nM | |
| 3-Formyltyrosine | KI | 300000 nM | |
| 3-Nitrotyrosine | KI | 400000 nM |
ChEMBL bioactivities
17 potent at pChembl≥5 of 17 total, top 17 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 8.15 | Kd | 7 | nM | CHEMBL525164 |
| 7.14 | Kd | 72 | nM | CHEMBL497827 |
| 7.14 | Kd | 73 | nM | CHEMBL483883 |
| 7.03 | Kd | 93 | nM | CHEMBL496193 |
| 6.96 | Kd | 110 | nM | CHEMBL524070 |
| 6.82 | Kd | 150 | nM | CHEMBL496195 |
| 6.70 | Kd | 200 | nM | CHEMBL496194 |
| 6.32 | Kd | 480 | nM | CHEMBL495805 |
| 6.09 | Kd | 810 | nM | CHEMBL497036 |
| 6.02 | Kd | 960 | nM | CHEMBL519500 |
| 5.70 | Kd | 2000 | nM | CHEMBL523078 |
| 5.52 | Kd | 3000 | nM | CHEMBL497233 |
| 5.52 | Kd | 3000 | nM | CHEMBL497633 |
| 5.48 | Kd | 3300 | nM | CHEMBL497037 |
| 5.33 | Kd | 4700 | nM | CHEMBL484080 |
| 5.21 | Kd | 6200 | nM | CHEMBL497636 |
| 5.06 | Kd | 8700 | nM | CHEMBL496050 |
PubChem BioAssay actives
17 with measured affinity, of 31 total; 17 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| (1R,4aS,5R,6R,8S,8aR)-6,8-dihydroxy-1,4a,6-trimethyl-5-[(E)-3-methyl-5-(3-methyl-5-oxo-2H-furan-2-yl)pent-3-enyl]-3,4,5,7,8,8a-hexahydro-2H-naphthalene-1-carboxylic acid | 371851: Binding affinity to TTL by surface plasmon resonance | kd | 0.0070 | uM |
| (2R)-2-[(E)-5-[(1R,2R,4S,4aR,5R,8aS)-2,4-dihydroxy-5-(hydroxymethyl)-2,5,8a-trimethyl-3,4,4a,6,7,8-hexahydro-1H-naphthalen-1-yl]-3-methylpent-2-enyl]-3-methyl-2H-furan-5-one | 371851: Binding affinity to TTL by surface plasmon resonance | kd | 0.0720 | uM |
| (2R)-2-[(E)-5-[(1S,3S,4R,8S,9R,10R,12R)-3-ethoxy-10-hydroxy-4,8,10-trimethyl-2-oxatricyclo[6.3.1.04,12]dodecan-9-yl]-3-methylpent-2-enyl]-3-methyl-2H-furan-5-one | 371851: Binding affinity to TTL by surface plasmon resonance | kd | 0.0730 | uM |
| (1R,4aS,5R,6R,8S,8aR)-6,8-dihydroxy-1,4a,6-trimethyl-5-[(E,5Z)-3-methyl-5-(3-methyl-5-oxofuran-2-ylidene)pent-3-enyl]-3,4,5,7,8,8a-hexahydro-2H-naphthalene-1-carboxylic acid | 371851: Binding affinity to TTL by surface plasmon resonance | kd | 0.0930 | uM |
| (5Z)-5-[(E)-5-[(1R,2R,4S,4aR,5R,8aS)-2,4-dihydroxy-5-(hydroxymethyl)-2,5,8a-trimethyl-3,4,4a,6,7,8-hexahydro-1H-naphthalen-1-yl]-3-methylpent-2-enylidene]-4-methylfuran-2-one | 371851: Binding affinity to TTL by surface plasmon resonance | kd | 0.1100 | uM |
| (1S,4R,8S,9R,10R,12R)-10-hydroxy-4,8,10-trimethyl-9-[(E,5Z)-3-methyl-5-(3-methyl-5-oxofuran-2-ylidene)pent-3-enyl]-2-oxatricyclo[6.3.1.04,12]dodecan-3-one | 371851: Binding affinity to TTL by surface plasmon resonance | kd | 0.1500 | uM |
| (1R,4aS,5R,6R,8S,8aR)-6,8-dihydroxy-1,4a,6-trimethyl-5-[(E,5Z)-3-methyl-5-(3-methyl-5-oxofuran-2-ylidene)pent-3-enyl]-3,4,5,7,8,8a-hexahydro-2H-naphthalene-1-carbaldehyde | 371851: Binding affinity to TTL by surface plasmon resonance | kd | 0.2000 | uM |
| (5Z)-5-[(E)-5-[(1S,4R,8S,9R,10R,12R)-3,10-dihydroxy-4,8,10-trimethyl-2-oxatricyclo[6.3.1.04,12]dodecan-9-yl]-3-methylpent-2-enylidene]-4-methylfuran-2-one | 371851: Binding affinity to TTL by surface plasmon resonance | kd | 0.4800 | uM |
| (1R,4aS,5R,6R,8S,8aR)-6,8-dihydroxy-1,4a,6-trimethyl-5-[(E)-3-methyl-5-[(2R)-3-methyl-5-oxo-2H-furan-2-yl]pent-3-enyl]-3,4,5,7,8,8a-hexahydro-2H-naphthalene-1-carbaldehyde | 371851: Binding affinity to TTL by surface plasmon resonance | kd | 0.8100 | uM |
| (2S)-2-[(E,1S)-5-[(1S,3S,4R,8S,9R,10R,12R)-3-ethoxy-10-hydroxy-4,8,10-trimethyl-2-oxatricyclo[6.3.1.04,12]dodecan-9-yl]-1-hydroxy-3-methylpent-2-enyl]-3-methyl-2H-furan-5-one | 371851: Binding affinity to TTL by surface plasmon resonance | kd | 0.9600 | uM |
| (2S)-2-[(E,1S)-5-[(1S,4S,4aR,5R,8aR)-4-hydroxy-5-(hydroxymethyl)-5,8a-dimethyl-2-methylidene-3,4,4a,6,7,8-hexahydro-1H-naphthalen-1-yl]-1-hydroxy-3-methylpent-2-enyl]-3-methyl-2H-furan-5-one | 371851: Binding affinity to TTL by surface plasmon resonance | kd | 2.0000 | uM |
| (1R,4aS,5R,6R,8S,8aR)-6,8-dihydroxy-5-[(E,5S)-5-hydroxy-3-methyl-5-[(2S)-3-methyl-5-oxo-2H-furan-2-yl]pent-3-enyl]-1,4a,6-trimethyl-3,4,5,7,8,8a-hexahydro-2H-naphthalene-1-carboxylic acid | 371851: Binding affinity to TTL by surface plasmon resonance | kd | 3.0000 | uM |
| (1R,4aS,5R,6R,8S,8aR)-6,8-dihydroxy-5-[(E,5S)-5-hydroxy-3-methyl-5-[(2S)-3-methyl-5-oxo-2H-furan-2-yl]pent-3-enyl]-1,4a,6-trimethyl-3,4,5,7,8,8a-hexahydro-2H-naphthalene-1-carbaldehyde | 371851: Binding affinity to TTL by surface plasmon resonance | kd | 3.0000 | uM |
| (1R,4aR,5S,8S,8aR)-8-hydroxy-5-[(E,5S)-5-hydroxy-3-methyl-5-[(2S)-3-methyl-5-oxo-2H-furan-2-yl]pent-3-enyl]-1,4a-dimethyl-6-methylidene-3,4,5,7,8,8a-hexahydro-2H-naphthalene-1-carbaldehyde | 371851: Binding affinity to TTL by surface plasmon resonance | kd | 3.3000 | uM |
| (2S)-2-[(E,1S)-5-[(1R,2R,4S,4aR,5R,8aS)-2,4-dihydroxy-5-(hydroxymethyl)-2,5,8a-trimethyl-3,4,4a,6,7,8-hexahydro-1H-naphthalen-1-yl]-1-hydroxy-3-methylpent-2-enyl]-3-methyl-2H-furan-5-one | 371851: Binding affinity to TTL by surface plasmon resonance | kd | 4.7000 | uM |
| methyl (1R,4aS,5R,6R,8S,8aR)-6,8-dihydroxy-5-[(E,5S)-5-hydroxy-3-methyl-5-[(2S)-3-methyl-5-oxo-2H-furan-2-yl]pent-3-enyl]-1,4a,6-trimethyl-3,4,5,7,8,8a-hexahydro-2H-naphthalene-1-carboxylate | 371851: Binding affinity to TTL by surface plasmon resonance | kd | 6.2000 | uM |
| (2R)-2-[(E)-5-[(1S,4R,8R,9S,12R)-4,8-dimethyl-10-methylidene-2-oxatricyclo[6.3.1.04,12]dodecan-9-yl]-3-methylpent-2-enyl]-3-methyl-2H-furan-5-one | 371851: Binding affinity to TTL by surface plasmon resonance | kd | 8.7000 | uM |
CTD chemical–gene interactions
24 total (human), top 24 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Acetaminophen | increases expression | 3 |
| Benzo(a)pyrene | affects methylation, increases expression | 3 |
| bisphenol F | increases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| bisphenol A | affects expression | 1 |
| cobaltous chloride | decreases expression | 1 |
| perfluorooctanoic acid | decreases expression | 1 |
| 2-amino-1-methyl-6-phenylimidazo(4,5-b)pyridine | increases expression | 1 |
| perfluoro-n-nonanoic acid | decreases expression | 1 |
| 2-palmitoylglycerol | increases expression | 1 |
| perfluorohexanesulfonic acid | decreases expression | 1 |
| ICG 001 | increases expression | 1 |
| abrine | decreases expression | 1 |
| 4-(4-((5-(4,5-dimethyl-2-nitrophenyl)-2-furanyl)methylene)-4,5-dihydro-3-methyl-5-oxo-1H-pyrazol-1-yl)benzoic acid | increases expression | 1 |
| Bortezomib | decreases expression | 1 |
| Diazinon | increases methylation | 1 |
| Doxorubicin | decreases expression | 1 |
| Estradiol | affects expression | 1 |
| Lead | affects splicing | 1 |
| Smoke | decreases expression | 1 |
| Tretinoin | decreases expression | 1 |
| Valproic Acid | increases expression | 1 |
| Okadaic Acid | increases expression | 1 |
| Copper Sulfate | increases expression | 1 |
ChEMBL screening assays
3 unique, capped per target: 3 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL2406639 | Binding | Inhibition of TTL (unknown origin) | Phosphinic acid-based inhibitors of tubulin polyglutamylases. — *Bioorg Med Chem Lett* |
Cellosaurus cell lines
2 cell lines: 2 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_E0SF | Ubigene HeLa TTL KO | Cancer cell line | Female |
| CVCL_XU82 | HAP1 TTL (-) | Cancer cell line | Male |
Clinical trials (associated diseases)
Via MONDO — disease-level, not drug-specific.
showing 60 of 235 trials:
| NCT | Phase | Status | Title |
|---|---|---|---|
| NCT00879060 | Phase 4 | COMPLETED | Clinical and Therapeutic Implications of Fibrosis in Hypertrophic Cardiomyopathy |
| NCT01721967 | Phase 4 | COMPLETED | Ranolazine for the Treatment of Chest Pain in HCM Patients |
| NCT02948998 | Phase 4 | UNKNOWN | Evaluating the Effect of Spironolactone on Hypertrophic Cardiomyopathy |
| NCT03249272 | Phase 4 | TERMINATED | Microvascular Dysfunction in Nonischemic Cardiomyopathy: Insights From CMR Assessment of Coronary Flow Reserve |
| NCT04133532 | Phase 4 | COMPLETED | Effect of Metoprolol in Post Alcohol Septal Ablation Patients With Hypertrophic Cardiomyopathy |
| NCT06401343 | Phase 4 | UNKNOWN | Use of SGLT2i in noHCM With HFpEF |
| NCT07103655 | Phase 4 | ENROLLING_BY_INVITATION | The Therapeutic Value of Mavacamten in Hypertrophic Cardiomyopathy With Mid-to-Apical Left Ventricular Obstruction |
| NCT07600177 | Phase 4 | RECRUITING | Mavacamten to Aficamten Transition in Patients With Obstructive Hypertrophic Cardiomyopathy |
| NCT07807384 | Phase 4 | NOT_YET_RECRUITING | Efficacy and Safety of an LVEF-Guided Mavacamten Dose Up-Titration Strategy in Chinese Patients With Symptomatic Obstructive Hypertrophic Cardiomyopathy |
| NCT00317967 | Phase 3 | COMPLETED | Study to Determine if Atorvastatin Reduces Size and Stiffness of Muscle in the Left Ventricle of the Heart |
| NCT00698074 | Phase 3 | UNKNOWN | Diastolic Ventricular Interaction and the Effects of Biventricular Pacing in Hypertrophic Cardiomyopathy |
| NCT00821353 | Phase 3 | COMPLETED | Antiarrhythmic Therapy Versus Catheter Ablation for Atrial Fibrillation in Hypertrophic Cardiomyopathy |
| NCT02431221 | Phase 3 | WITHDRAWN | Efficacy, Safety, and Tolerability of Perhexiline in Subjects With Hypertrophic Cardiomyopathy and Heart Failure |
| NCT03470545 | Phase 3 | COMPLETED | Clinical Study to Evaluate Mavacamten (MYK-461) in Adults With Symptomatic Obstructive Hypertrophic Cardiomyopathy |
| NCT05174416 | Phase 3 | COMPLETED | A Study to Evaluate the Efficacy and Safety of Mavacamten in Chinese Adults With Symptomatic Obstructive HCM |
| NCT05182658 | Phase 3 | ACTIVE_NOT_RECRUITING | Empagliflozin in Hypertrophic Cardiomyopathy |
| NCT05186818 | Phase 3 | COMPLETED | Phase 3 Trial to Evaluate the Efficacy and Safety of Aficamten Compared to Placebo in Adults With Symptomatic oHCM |
| NCT05767346 | Phase 3 | COMPLETED | Phase 3 Trial to Evaluate the Efficacy and Safety of Aficamten Compared to Metoprolol Succinate in Adults With Symptomatic oHCM |
| NCT06116968 | Phase 3 | COMPLETED | An Open-Label Study of Aficamten for Chinese Patients With Symptomatic oHCM |
| NCT06873828 | Phase 3 | NOT_YET_RECRUITING | Evaluation of the Efficacy and Safety of Wearable ECG (AT-Patch) in Patients With Hypertrophic Cardiomyopathy Requiring 48-Hour Holter MonitoringEvaluation of the Efficacy and Safety of Wearable ECG (AT-Patch) in Patients With Hypertrophic Cardiomyopathy Requiring 48-Hour Holter Monitoring |
| NCT07021976 | Phase 3 | ACTIVE_NOT_RECRUITING | A Phase III Trial of HRS-1893 in Patients With Obstructive Hypertrophic Cardiomyopathy |
| NCT07023341 | Phase 3 | ACTIVE_NOT_RECRUITING | A Study to Learn More About How Well Aficamten Works in Japanese Participants With Symptomatic Obstructive Hypertrophic Cardiomyopathy |
| NCT07202897 | Phase 3 | RECRUITING | LA-HCM Study : Rivaroxaban for Antithrombotic Prevention in Hypertrophic Cardiomyopathy Patients With Abnormal Left Atrial Strain. |
| NCT00001631 | Phase 2 | COMPLETED | Study of Blood Flow in Heart Muscle |
| NCT00001894 | Phase 2 | COMPLETED | A Comparison of Two Treatments: Pacemaker and Percutaneous Transluminal Septal Ablation for Hypertrophic Cardiomyopathy |
| NCT00001960 | Phase 2 | COMPLETED | Studying the Effectiveness of Pacemaker Therapy in Children Who Have Thickened Heart Muscle |
| NCT00011076 | Phase 2 | COMPLETED | Pirfenidone to Treat Hypertrophic Cardiomyopathy |
| NCT00035386 | Phase 2 | COMPLETED | Alcohol Septal Ablation in Obstructive Hypertrophic Cardiomyopathy: A Pilot Study |
| NCT00430833 | Phase 2 | UNKNOWN | CHANCE - Candesartan in Hypertrophic Cardiomyopathy |
| NCT00500552 | Phase 2 | COMPLETED | Perhexiline Therapy in Patients With Hypertrophic Cardiomyopathy |
| NCT01150461 | Phase 2 | COMPLETED | Effect of Losartan in Patients With Nonobstructive Hypertrophic Cardiomyopathy |
| NCT01230918 | Phase 2 | TERMINATED | Study to Develop a Non-invasive Marker for Monitoring Myocardial Fibrosis |
| NCT01447654 | Phase 2 | COMPLETED | Inhibition of the Renin Angiotensin System With Losartan in Patients With Hypertrophic Cardiomyopathy |
| NCT01696370 | Phase 2 | UNKNOWN | Trimetazidine Therapy in Hypertrophic Cardiomyopathy |
| NCT01912534 | Phase 2 | COMPLETED | Valsartan for Attenuating Disease Evolution In Early Sarcomeric HCM |
| NCT02590809 | Phase 2 | COMPLETED | Hypertrophic Cardiomyopathy Symptom Release by BX1514M |
| NCT03496168 | Phase 2 | COMPLETED | Extension Study of Mavacamten (MYK-461) in Adults With Symptomatic Obstructive Hypertrophic Cardiomyopathy Previously Enrolled in PIONEER |
| NCT03532802 | Phase 2 | COMPLETED | The Effect of Metoprolol in Patients With Hypertrophic Obstructive Cardiomyopathy. |
| NCT03832660 | Phase 2 | COMPLETED | Sacubitril/Valsartan vs Lifestyle in Hypertrophic Cardiomyopathy |
| NCT04219826 | Phase 2 | COMPLETED | Dose-finding Study to Evaluate the Safety, Tolerability, Pharmacokinetics, and Pharmacodynamics of CK-3773274 in Adults With Hypertrophic Cardiomyopathy |
| NCT04426578 | Phase 2 | UNKNOWN | Role of Perhexiline in Hypertrophic Cardiomyopathy |
| NCT04706429 | Phase 2 | COMPLETED | The Efficacy and Mechanism of Trientine in Patients With Hypertrophic Cardiomyopathy |
| NCT06347159 | Phase 2 | ACTIVE_NOT_RECRUITING | A Study of EDG-7500 in Adults With Hypertrophic Cardiomyopathy (CIRRUS-HCM) |
| NCT06516068 | Phase 2 | ACTIVE_NOT_RECRUITING | A Trial of HRS-1893 in Patients With Obstructive Hypertrophic Cardiomyopathy |
| NCT07021963 | Phase 2 | RECRUITING | A Clinical Study to Evaluate the Long-term Safety of HRS-1893 in Hypertrophic Cardiomyopathy |
| NCT07367724 | Phase 2 | RECRUITING | Ademetionine in Obstructive Hypertrophic Cardiomyopathy |
| NCT07675668 | Phase 2 | NOT_YET_RECRUITING | Aom0304 in Adult Patients With Symptomatic Hypertrophic Cardiomyopathy |
| NCT00001396 | Phase 1 | COMPLETED | Natural History and Results of Dual Chamber (DDD) Pacemaker Therapy of Children With Obstructive Hypertrophic Cardiomyop… |
| NCT00504647 | Phase 1 | UNKNOWN | Biventricular Pacing in Hypertrophic Cardiomyopathy |
| NCT01537926 | Phase 1 | COMPLETED | Hypertrophic Regression With N-Acetylcysteine in HCM |
| NCT02329184 | Phase 1 | COMPLETED | Study Evaluating the Safety, Tolerability and Preliminary Pharmacokinetics and Pharmacodynamics of MYK-461 |
| NCT04783766 | Phase 1 | COMPLETED | Safety, Tolerability and Pharmacokinetics Study of CK-3773274 |
| NCT05135871 | Phase 1 | COMPLETED | Study Evaluating the Pharmacokinetics of Mavacamten in Healthy Adult Chinese Subjects |
| NCT05879523 | Phase 1 | COMPLETED | A Trial of HRS-1893 in Healthy Volunteers and Patients With Obstructive Hypertrophic Cardiomyopathy |
| NCT06210607 | Phase 1 | UNKNOWN | A Trial of HS-10511 in Healthy Subjects |
| NCT06354556 | Phase 1 | COMPLETED | Effect of Verapamil Tablets on the Pharmacokinetic of HRS-1893 Tablets in Healthy Subjects |
| NCT06775834 | Phase 1 | COMPLETED | Safety and Pharmacokinetics Study of HRS-1893 Tablets in Healthy Subjects and Those With Impaired Kidney Function |
| NCT00319982 | Phase 2/3 | COMPLETED | Treatment of Preclinical Hypertrophic Cardiomyopathy With Diltiazem |
| NCT02291237 | Phase 2/3 | TERMINATED | Effect of Eleclazine (GS-6615) on Exercise Capacity in Subjects With Symptomatic Hypertrophic Cardiomyopathy |
| NCT03723655 | Phase 2/3 | COMPLETED | A Long-Term Safety Extension Study of Mavacamten in Adults Who Have Completed MAVERICK-HCM or EXPLORER-HCM |
Predicted chemistry — Sugi Predict
The predicted patent-compound landscape for TTL across ~30M SureChEMBL compounds — explore on Sugi Predict.
Related Atlas pages
- Associated diseases: hypertrophic cardiomyopathy, complex neurodevelopmental disorder
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): complex neurodevelopmental disorder, hypertrophic cardiomyopathy