TUB-AS1

Summary

TUB-AS1 (TUB antisense RNA 1, HGNC:51120) is a long non-coding RNA gene on chromosome 11p15.4.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:51120
Approved symbol	TUB-AS1
Name	TUB antisense RNA 1
Location	11p15.4
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000248332
Ensembl biotype	lncRNA
Entrez	101927917
RNAcentral	URS00003B1BE5 — lncRNA, 2021 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 2 — 2 lncRNA

ENST00000506601, ENST00000530466

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000506601 — 4 exons

Exon	Start	End
ENSE00002027893	8062073	8062231
ENSE00002028845	8067610	8069373
ENSE00002049737	8060038	8060078
ENSE00002080290	8067423	8067479

Expression profiles

Bgee: expression breadth broad, 77 present calls, max score 61.19.

Top tissues by expression

77 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	61.19	gold quality
adult mammalian kidney	UBERON:0000082	57.55	gold quality
urinary bladder	UBERON:0001255	56.74	silver quality
kidney	UBERON:0002113	56.62	gold quality
placenta	UBERON:0001987	55.49	gold quality
prostate gland	UBERON:0002367	54.09	gold quality
prefrontal cortex	UBERON:0000451	51.39	gold quality
cortex of kidney	UBERON:0001225	51.31	gold quality
primary visual cortex	UBERON:0002436	51.04	gold quality
small intestine	UBERON:0002108	50.55	silver quality
olfactory segment of nasal mucosa	UBERON:0005386	49.88	gold quality
blood	UBERON:0000178	49.20	gold quality
heart left ventricle	UBERON:0002084	49.12	gold quality
monocyte	CL:0000576	48.68	silver quality
muscle of leg	UBERON:0001383	48.29	gold quality
uterine cervix	UBERON:0000002	48.00	gold quality
ectocervix	UBERON:0012249	47.11	gold quality
body of pancreas	UBERON:0001150	46.95	silver quality
heart	UBERON:0000948	46.88	gold quality
gastrocnemius	UBERON:0001388	46.34	silver quality
left ovary	UBERON:0002119	46.15	gold quality
left adrenal gland cortex	UBERON:0035825	46.12	silver quality
metanephros cortex	UBERON:0010533	45.68	gold quality
body of uterus	UBERON:0009853	45.35	gold quality
tibial artery	UBERON:0007610	45.16	gold quality
thoracic mammary gland	UBERON:0005200	44.87	gold quality
skin of abdomen	UBERON:0001416	44.45	gold quality
Brodmann (1909) area 9	UBERON:0013540	44.40	gold quality
cerebellum	UBERON:0002037	43.82	silver quality
body of stomach	UBERON:0001161	43.72	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.95

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.