TUBB4A
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Also known as beta-5
Summary
TUBB4A (tubulin beta 4A class IVa, HGNC:20774) is a protein-coding gene on chromosome 19p13.3, encoding Tubulin beta-4A chain (P04350). Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers.
This gene encodes a member of the beta tubulin family. Beta tubulins are one of two core protein families (alpha and beta tubulins) that heterodimerize and assemble to form microtubules. Mutations in this gene cause hypomyelinating leukodystrophy-6 and autosomal dominant torsion dystonia-4. Alternate splicing results in multiple transcript variants encoding different isoforms. A pseudogene of this gene is found on chromosome X.
Source: NCBI Gene 10382 — RefSeq curated summary.
At a glance
- Gene–disease (curated): TUBB4A-related neurologic disorder (Definitive, ClinGen) — +2 more curated relationships
- GWAS associations: 2
- Clinical variants (ClinVar): 355 total — 8 pathogenic, 24 likely-pathogenic
- Phenotypes (HPO): 56
- Druggable target: yes — 21 molecules with ChEMBL bioactivity
- Dosage sensitivity (ClinGen): haploinsufficiency no evidence, triplosensitivity no evidence
- MANE Select transcript:
NM_006087
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:20774 |
| Approved symbol | TUBB4A |
| Name | tubulin beta 4A class IVa |
| Location | 19p13.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | beta-5 |
| Ensembl gene | ENSG00000104833 |
| Ensembl biotype | protein_coding |
| OMIM | 602662 |
| Entrez | 10382 |
Gene structure
Transcript identifiers
Ensembl transcripts: 13 — 11 protein_coding, 2 nonsense_mediated_decay
ENST00000264071, ENST00000594075, ENST00000594276, ENST00000594290, ENST00000595324, ENST00000596291, ENST00000596926, ENST00000597686, ENST00000598006, ENST00000598635, ENST00000601152, ENST00000601640, ENST00000714086
RefSeq mRNA: 6 — MANE Select: NM_006087
NM_001289123, NM_001289127, NM_001289129, NM_001289130, NM_001289131, NM_006087
CCDS: CCDS12168
Canonical transcript exons
ENST00000264071 — 4 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001159938 | 6494319 | 6496221 |
| ENSE00001630000 | 6501515 | 6501623 |
| ENSE00003206964 | 6502156 | 6502309 |
| ENSE00003464353 | 6501287 | 6501397 |
Expression profiles
Bgee: expression breadth ubiquitous, 201 present calls, max score 99.86.
FANTOM5 (CAGE): breadth broad, TPM avg 48.4537 / max 4721.8513, expressed in 770 samples.
FANTOM5 promoters (6 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 178685 | 44.3657 | 721 |
| 178686 | 3.6923 | 434 |
| 178684 | 0.1334 | 63 |
| 178687 | 0.1203 | 62 |
| 178688 | 0.0910 | 44 |
| 178689 | 0.0510 | 35 |
Top tissues by expression
297 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| right hemisphere of cerebellum | UBERON:0014890 | 99.86 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 99.83 | gold quality |
| cerebellar cortex | UBERON:0002129 | 99.82 | gold quality |
| Brodmann (1909) area 10 | UBERON:0013541 | 99.72 | gold quality |
| cerebellum | UBERON:0002037 | 99.60 | gold quality |
| C1 segment of cervical spinal cord | UBERON:0006469 | 99.59 | gold quality |
| right frontal lobe | UBERON:0002810 | 99.57 | gold quality |
| paraflocculus | UBERON:0005351 | 99.55 | gold quality |
| prefrontal cortex | UBERON:0000451 | 99.51 | gold quality |
| middle frontal gyrus | UBERON:0002702 | 99.38 | gold quality |
| spinal cord | UBERON:0002240 | 99.22 | gold quality |
| cortical plate | UBERON:0005343 | 99.20 | gold quality |
| cingulate cortex | UBERON:0003027 | 99.10 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 99.10 | gold quality |
| amygdala | UBERON:0001876 | 98.97 | gold quality |
| caudate nucleus | UBERON:0001873 | 98.93 | gold quality |
| medial globus pallidus | UBERON:0002477 | 98.92 | gold quality |
| hypothalamus | UBERON:0001898 | 98.88 | gold quality |
| nucleus accumbens | UBERON:0001882 | 98.79 | gold quality |
| inferior vagus X ganglion | UBERON:0005363 | 98.72 | gold quality |
| frontal cortex | UBERON:0001870 | 98.67 | gold quality |
| frontal lobe | UBERON:0016525 | 98.67 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 98.61 | gold quality |
| putamen | UBERON:0001874 | 98.39 | gold quality |
| globus pallidus | UBERON:0001875 | 98.37 | gold quality |
| postcentral gyrus | UBERON:0002581 | 98.29 | gold quality |
| cerebellar vermis | UBERON:0004720 | 98.23 | gold quality |
| corpus callosum | UBERON:0002336 | 98.21 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 98.17 | gold quality |
| left adrenal gland cortex | UBERON:0035825 | 98.17 | gold quality |
Single-cell (SCXA)
Detected in 8 experiment(s), a significant marker in 4.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-GEOD-36552 | yes | 1513.77 |
| E-MTAB-6819 | yes | 557.73 |
| E-GEOD-84465 | yes | 14.22 |
| E-GEOD-93593 | yes | 6.98 |
| E-MTAB-3929 | no | 2740.21 |
| E-GEOD-81383 | no | 196.15 |
| E-MTAB-6386 | no | 8.80 |
| E-ANND-3 | no | 3.30 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
66 targeting TUBB4A, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4283 | 100.00 | 66.42 | 2097 |
| HSA-MIR-6833-3P | 100.00 | 70.63 | 3197 |
| HSA-MIR-6127 | 100.00 | 66.76 | 2188 |
| HSA-MIR-6129 | 100.00 | 66.46 | 2080 |
| HSA-MIR-520G-5P | 99.99 | 66.76 | 658 |
| HSA-MIR-4500 | 99.99 | 72.72 | 2367 |
| HSA-MIR-6845-3P | 99.94 | 66.88 | 1439 |
| HSA-MIR-4731-5P | 99.89 | 67.23 | 2537 |
| HSA-MIR-4447 | 99.85 | 67.81 | 2900 |
| HSA-MIR-4728-5P | 99.85 | 69.39 | 4718 |
| HSA-MIR-4739 | 99.84 | 65.25 | 1832 |
| HSA-MIR-1321 | 99.84 | 65.30 | 1811 |
| HSA-MIR-4756-5P | 99.84 | 64.98 | 1809 |
| HSA-MIR-6785-5P | 99.82 | 68.68 | 4428 |
| HSA-MIR-577 | 99.78 | 69.13 | 2479 |
| HSA-MIR-149-3P | 99.72 | 68.22 | 3963 |
| HSA-MIR-10393-3P | 99.72 | 66.56 | 961 |
| HSA-MIR-6801-5P | 99.72 | 66.50 | 981 |
| HSA-MIR-6883-5P | 99.69 | 68.05 | 3785 |
| HSA-MIR-3934-5P | 99.67 | 64.04 | 846 |
| HSA-MIR-4527 | 99.66 | 67.43 | 714 |
| HSA-MIR-1827 | 99.63 | 68.57 | 3265 |
| HSA-MIR-6503-5P | 99.62 | 66.96 | 597 |
| HSA-MIR-4756-3P | 99.62 | 66.30 | 1319 |
| HSA-MIR-6797-5P | 99.61 | 66.55 | 2084 |
| HSA-MIR-1249-5P | 99.61 | 66.55 | 2049 |
| HSA-MIR-4472 | 99.56 | 66.08 | 1478 |
| HSA-MIR-6716-5P | 99.56 | 68.62 | 1244 |
| HSA-MIR-4437 | 99.52 | 65.29 | 1266 |
| HSA-MIR-1207-5P | 99.49 | 69.11 | 2983 |
Functional genomics
ClinGen dosage: haploinsufficiency 0 (no evidence), triplosensitivity 0 (no evidence). ClinGen Gene Dosage Map
Literature-anchored findings (GeneRIF, showing 37)
- The results provide the first evidence that a specific isoform of beta-tubulin is required for mitosis. (PMID:18553364)
- Suggest that nuclear accumulation of soluble tubulin is part of an intrinsic defense mechanism, which tends to limit cell proliferation under pathological conditions. (PMID:19299461)
- Data show six differentially expressed proteins were identified as HSP70, PPIA and alpha-Enolase (up-regulated) S100-A9, PIMT and beta-5 tubulin (down-regulated), most of which had been shown to play a potential role in the pathogenesis of atherosclerosis. (PMID:21839816)
- DYT4 is a familial form of dystonia unrelated to known dystonia genes and loci. Phenotypic expression is variable, ranging from isolated spasmodic dysphonia (often with mild craniocervical dystonia) to severe generalized dystonia. (PMID:21956287)
- Destruction of the beta-tubulin:CCT-beta complex provokes Hsp90-dependent protein ubiquitination and degradation. (PMID:23190606)
- This study demonistrated that TUBB4A mutation in the autoregulatory domain cause hereditary dystonia. (PMID:23424103)
- A de novo mutation in the beta-tubulin gene TUBB4A results in the leukoencephalopathy hypomyelination with atrophy of the basal ganglia and cerebellum. (PMID:23582646)
- This study provided strong evidence supporting the causative role of a mutation in TUBB4, altering a highly conserved and functionally important amino acid, in DYT4 dystonia. (PMID:23595291)
- Data indicate that leucine-rich repeat kinase 2 (LRRK2) selectively interacts with three beta-tubulin isoforms: TUBB, TUBB4, and TUBB6. (PMID:24275654)
- The c.4C>G DYT4 mutation appears to be private, and clinical testing for TUBB4A mutations is not justified in spasmodic dysphonia or other forms of primary dystonia (PMID:24598712)
- Novel TUBB4A mutations and expansion of the neuroimaging phenotype of hypomyelination with atrophy of the basal ganglia and cerebellum (H-ABC). (PMID:24706558)
- This study demonistrated that Hypomyelination with atrophy of the basal ganglia and cerebellum with TUBB4A mutation. (PMID:24785942)
- TUBB4A mutations cause typical hypomyelinating leukoencephalopathies. (PMID:24850488)
- Novel TUBB4A mutations expands the phenotype of TUBB4A-related hypomyelinating conditions beyond hypomyelination with atrophy of the basal ganglia and cerebellum. (PMID:25085639)
- Data suggested H-ABC and DYT4 belong to a continuous phenotypic spectrum associated with TUBB4A mutations. (PMID:25545912)
- The study adds complicated hereditary spastic paraplegia to the clinical spectrum of TUBB4A-associated neurological disorders. (PMID:25772097)
- our data indicate that TUBB4A coding mutations do not play a critical role in the broad population of isolated dystonia patients (PMID:26318963)
- a paclitaxel-resistant beta-tubulin isotype, betaIVa-tubulin, was the most up-regulated gene compared with other beta-tubulin isotypes in H460 floating cells, concomitant with elevated ERK activation (PMID:26375501)
- TUBB4A-mutated patients manifest a comparable clinical and neuroimaging picture but they can differ from each other in terms of rate of disease progression (PMID:26643067)
- Genetic screening targeted at currently known disease-causing mutations in TOR1A, THAP1, and TUBB4 appears to have low diagnostic yield in sporadic spasmodic dysphonia. In our cohort, only 2 patients tested positive for novel/rare variants in THAP1. (PMID:27188707)
- TUBB3 and TUBB4 are necessary for the transport and proper localization of N-cadherin within the plasma membrane. (PMID:28648944)
- The data of this studies suggest that mutations in TUBB4A exceedingly rarely contribute to the etiology of isolated dystonia. (PMID:28655586)
- The different clinical phenotypes associated with TUBB4A reflect the selective and specific cellular effects of the causative mutations. Cellular specificity of disease pathogenesis is relevant to developing targeted treatments for this disabling condition. (PMID:28973395)
- Together, DYT4-associated TUBB4A mutants themselves form aberrant tubulin networks and inhibit neuronal process growth, possibly explaining progress through the pathological states at cellular levels. (PMID:29127012)
- In summary, betaV-tubulin was localized to secretory cells of the distal Fallopian tube epithelium and its expression varied according to the clinical diagnosis. (PMID:29298171)
- Neuroblastoma cells expressing TUBB4A mutations p.D249N and p.A271T showed reduced neurite outgrowth, less dynamic microtubules, and an altered Kif-5 binding affinity. Endogenously mutated induced pluripotent stem cell (iPSC)-derived neurons from patients and in CRISPR/Cas9-derived heterozygous TUBB4A knockout iPSC-derived neurons, we detected alterations in mitochondrial transport. (PMID:30079973)
- Estimating the relative frequency of leukodystrophies and recommendations for carrier screening in the era of next-generation sequencing. (PMID:32573057)
- Corpus callosum thinning in autosomal dominant hereditary spastic paraplegia associated with a novel TUBbeta4A mutation. (PMID:32720309)
- DYT-TUBB4A (DYT4 Dystonia): New Clinical and Genetic Observations. (PMID:32943487)
- Acquisition of Developmental Milestones in Hypomyelination With Atrophy of the Basal Ganglia and Cerebellum and Other TUBB4A-Related Leukoencephalopathy. (PMID:34514881)
- In-silico phenotype prediction by normal mode variant analysis in TUBB4A-related disease. (PMID:34997144)
- H-ABC- and dystonia-causing TUBB4A mutations show distinct pathogenic effects. (PMID:35275727)
- TUBB4A interacts with MYH9 to protect the nucleus during cell migration and promotes prostate cancer via GSK3beta/beta-catenin signalling. (PMID:35589707)
- Novel TUBB4A mutation in a family with hereditary spastic paraplegia. (PMID:35871212)
- [Analysis of TUBB4A gene variant in a patient with adolescent-onset hypomyelinating leukodystrophy with atrophy of basal ganglia and cerebellum]. (PMID:36972930)
- Mutation in the beta-tubulin gene TUBB4A results in epileptic encephalopathy associated with hypomyelinated leucodystrophy: Unexpected findings reveal genetic mosaicism. (PMID:37529938)
- Expanding the phenotypic and genotypic spectrum of DYT-TUBB4A with seven patients from India. (PMID:38762926)
Cross-species orthologs
2 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Tubb4a | ENSMUSG00000062591 |
| rattus_norvegicus | Tubb4a | ENSRNOG00000047505 |
Paralogs (23): TUBG2 (ENSG00000037042), TUBE1 (ENSG00000074935), TUBA3D (ENSG00000075886), TUBB1 (ENSG00000101162), TUBD1 (ENSG00000108423), TUBA1B (ENSG00000123416), TUBA4A (ENSG00000127824), TUBG1 (ENSG00000131462), TUBB2A (ENSG00000137267), TUBB2B (ENSG00000137285), TUBA3E (ENSG00000152086), TUBA1A (ENSG00000167552), TUBA1C (ENSG00000167553), TUBB8B (ENSG00000173213), TUBB6 (ENSG00000176014), TUBAL3 (ENSG00000178462), TUBA8 (ENSG00000183785), TUBB4B (ENSG00000188229), TUBB (ENSG00000196230), TUBA3C (ENSG00000198033), TUBA4B (ENSG00000243910), TUBB3 (ENSG00000258947), TUBB8 (ENSG00000261456)
Protein
Protein identifiers
Tubulin beta-4A chain — P04350 (reviewed: P04350)
Alternative names: Tubulin 5 beta, Tubulin beta-4 chain
All UniProt accessions (13): A0AAQ5BHG7, P04350, M0QX14, M0QY37, M0QY85, M0QYM7, M0QZL7, M0R0M1, M0R0X0, M0R1I1, M0R278, M0R2D3, M0R2T4
UniProt curated annotations — full annotation on UniProt →
Function. Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin.
Subunit / interactions. Dimer of alpha and beta chains. A typical microtubule is a hollow water-filled tube with an outer diameter of 25 nm and an inner diameter of 15 nM. Alpha-beta heterodimers associate head-to-tail to form protofilaments running lengthwise along the microtubule wall with the beta-tubulin subunit facing the microtubule plus end conferring a structural polarity. Microtubules usually have 13 protofilaments but different protofilament numbers can be found in some organisms and specialized cells.
Subcellular location. Cytoplasm. Cytoskeleton.
Tissue specificity. Major isotype in brain, where it represents 46% of all beta-tubulins. In the brain, highest expression levels in the cerebellum, followed by putamen and white matter. Moderate levels in testis. Very low levels, if any, in other tissues.
Post-translational modifications. Some glutamate residues at the C-terminus are polyglutamylated, resulting in polyglutamate chains on the gamma-carboxyl group. Polyglutamylation plays a key role in microtubule severing by spastin (SPAST). SPAST preferentially recognizes and acts on microtubules decorated with short polyglutamate tails: severing activity by SPAST increases as the number of glutamates per tubulin rises from one to eight, but decreases beyond this glutamylation threshold. Glutamylation is also involved in cilia motility. Some glutamate residues at the C-terminus are monoglycylated but not polyglycylated due to the absence of functional TTLL10 in human. Monoglycylation is mainly limited to tubulin incorporated into cilia and flagella axonemes, which is required for their stability and maintenance. Flagella glycylation controls sperm motility. Both polyglutamylation and monoglycylation can coexist on the same protein on adjacent residues, and lowering glycylation levels increases polyglutamylation, and reciprocally. Phosphorylated on Ser-172 by CDK1 during the cell cycle, from metaphase to telophase, but not in interphase. This phosphorylation inhibits tubulin incorporation into microtubules.
Disease relevance. Dystonia 4, torsion, autosomal dominant (DYT4) [MIM:128101] A form of torsion dystonia, a disease defined by the presence of sustained involuntary muscle contractions, often leading to abnormal postures. ‘Torsion’ refers to the twisting nature of body movements, often affecting the trunk. DYT4 is characterized by onset in the second to third decade of progressive laryngeal dysphonia followed by the involvement of other muscles, such as the neck or limbs. Some patients develop an ataxic gait. The disease is caused by variants affecting the gene represented in this entry. Leukodystrophy, hypomyelinating, 6 (HLD6) [MIM:612438] A neurologic disorder characterized by onset in infancy or early childhood of delayed motor development and gait instability, followed by extrapyramidal movement disorders, such as dystonia, choreoathetosis, rigidity, opisthotonus, and oculogyric crises, progressive spastic tetraplegia, ataxia, and, more rarely, seizures. Most patients have cognitive decline and speech delay, but some can function normally. Brain MRI shows a combination of hypomyelination, cerebellar atrophy, and atrophy or disappearance of the putamen. The disease is caused by variants affecting the gene represented in this entry.
Domain organisation. The highly acidic C-terminal region may bind cations such as calcium. The MREI motif is common among all beta-tubulin isoforms and may be critical for tubulin autoregulation.
Similarity. Belongs to the tubulin family.
RefSeq proteins (6): NP_001276052, NP_001276056, NP_001276058, NP_001276059, NP_001276060, NP_006078* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000217 | Tubulin | Family |
| IPR002453 | Beta_tubulin | Family |
| IPR003008 | Tubulin_FtsZ_GTPase | Domain |
| IPR008280 | Tub_FtsZ_C | Homologous_superfamily |
| IPR013838 | Beta-tubulin_BS | Binding_site |
| IPR017975 | Tubulin_CS | Conserved_site |
| IPR018316 | Tubulin/FtsZ_2-layer-sand-dom | Domain |
| IPR023123 | Tubulin_C | Homologous_superfamily |
| IPR036525 | Tubulin/FtsZ_GTPase_sf | Homologous_superfamily |
| IPR037103 | Tubulin/FtsZ-like_C | Homologous_superfamily |
Pfam: PF00091, PF03953
UniProt features (20 total): binding site 9, sequence variant 4, sequence conflict 3, modified residue 2, chain 1, short sequence motif 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P04350-F1 | 92.25 | 0.84 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Ligand- & substrate-binding residues (9): 226; 11; 69; 69; 138; 142; 143; 144; 204
Post-translational modifications (2): 172, 436
Function
Pathways and Gene Ontology
Reactome pathways
93 pathways
| ID | Pathway |
|---|---|
| R-HSA-1445148 | Translocation of SLC2A4 (GLUT4) to the plasma membrane |
| R-HSA-190840 | Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane |
| R-HSA-190861 | Gap junction assembly |
| R-HSA-2132295 | MHC class II antigen presentation |
| R-HSA-2467813 | Separation of Sister Chromatids |
| R-HSA-2500257 | Resolution of Sister Chromatid Cohesion |
| R-HSA-2565942 | Regulation of PLK1 Activity at G2/M Transition |
| R-HSA-3371497 | HSP90 chaperone cycle for steroid hormone receptors (SHR) in the presence of ligand |
| R-HSA-380259 | Loss of Nlp from mitotic centrosomes |
| R-HSA-380270 | Recruitment of mitotic centrosome proteins and complexes |
| R-HSA-380284 | Loss of proteins required for interphase microtubule organization from the centrosome |
| R-HSA-380320 | Recruitment of NuMA to mitotic centrosomes |
| R-HSA-389957 | Prefoldin mediated transfer of substrate to CCT/TriC |
| R-HSA-389960 | Formation of tubulin folding intermediates by CCT/TriC |
| R-HSA-389977 | Post-chaperonin tubulin folding pathway |
| R-HSA-437239 | Recycling pathway of L1 |
| R-HSA-5610787 | Hedgehog ‘off’ state |
| R-HSA-5617833 | Cilium Assembly |
| R-HSA-5620912 | Anchoring of the basal body to the plasma membrane |
| R-HSA-5620924 | Intraflagellar transport |
| R-HSA-5626467 | RHO GTPases activate IQGAPs |
| R-HSA-5663220 | RHO GTPases Activate Formins |
| R-HSA-6807878 | COPI-mediated anterograde transport |
| R-HSA-6811434 | COPI-dependent Golgi-to-ER retrograde traffic |
| R-HSA-6811436 | COPI-independent Golgi-to-ER retrograde traffic |
| R-HSA-68877 | Mitotic Prometaphase |
| R-HSA-8852276 | The role of GTSE1 in G2/M progression after G2 checkpoint |
| R-HSA-8854518 | AURKA Activation by TPX2 |
| R-HSA-8955332 | Carboxyterminal post-translational modifications of tubulin |
| R-HSA-9609690 | HCMV Early Events |
MSigDB gene sets: 391 (showing top):
GOBP_NEGATIVE_REGULATION_OF_PROTEIN_CONTAINING_COMPLEX_ASSEMBLY, WU_APOPTOSIS_BY_CDKN1A_VIA_TP53, AP1_01, GOBP_REGULATION_OF_PROTEIN_POLYMERIZATION, MYOGENIN_Q6, GOBP_REGULATION_OF_MICROTUBULE_BASED_PROCESS, REACTOME_ADAPTIVE_IMMUNE_SYSTEM, REACTOME_CYTOKINE_SIGNALING_IN_IMMUNE_SYSTEM, ENK_UV_RESPONSE_KERATINOCYTE_UP, GCANCTGNY_MYOD_Q6, DAZARD_UV_RESPONSE_CLUSTER_G4, GOBP_NEGATIVE_REGULATION_OF_PROTEIN_POLYMERIZATION, TGACCTY_ERR1_Q2, REACTOME_MEMBRANE_TRAFFICKING, CHX10_01
GO Biological Process (5): microtubule cytoskeleton organization (GO:0000226), mitotic cell cycle (GO:0000278), negative regulation of microtubule polymerization (GO:0031115), cytoskeleton organization (GO:0007010), microtubule-based process (GO:0007017)
GO Molecular Function (7): GTPase activity (GO:0003924), structural constituent of cytoskeleton (GO:0005200), calcium ion binding (GO:0005509), GTP binding (GO:0005525), nucleotide binding (GO:0000166), protein binding (GO:0005515), metal ion binding (GO:0046872)
GO Cellular Component (15): nucleus (GO:0005634), cytoplasm (GO:0005737), cytosol (GO:0005829), microtubule (GO:0005874), axoneme (GO:0005930), microtubule cytoskeleton (GO:0015630), internode region of axon (GO:0033269), neuronal cell body (GO:0043025), myelin sheath (GO:0043209), intercellular bridge (GO:0045171), extracellular exosome (GO:0070062), mitotic spindle (GO:0072686), cytoskeleton (GO:0005856), cilium (GO:0005929), cell projection (GO:0042995)
Reactome top-level categories
Rollup of top-16 pathways:
| Category | Pathways |
|---|---|
| Mitotic Prometaphase | 2 |
| Centrosome maturation | 2 |
| Cooperation of Prefoldin and TriC/CCT in actin and tubulin folding | 2 |
| Assembly of the 9+0 primary cilium | 2 |
| Membrane Trafficking | 1 |
| Transport of connexons to the plasma membrane | 1 |
| Gap junction trafficking | 1 |
| Adaptive Immune System | 1 |
| Mitotic Anaphase | 1 |
| G2/M Transition | 1 |
| Cellular responses to stress | 1 |
| Loss of proteins required for interphase microtubule organization from the centrosome | 1 |
| Protein folding | 1 |
| L1CAM interactions | 1 |
| Signaling by Hedgehog | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 7 |
| cytoskeleton | 3 |
| cytoskeleton organization | 2 |
| microtubule-based process | 1 |
| cell cycle | 1 |
| mitotic nuclear division | 1 |
| negative regulation of microtubule polymerization or depolymerization | 1 |
| regulation of microtubule polymerization | 1 |
| negative regulation of protein polymerization | 1 |
| microtubule polymerization | 1 |
| negative regulation of supramolecular fiber organization | 1 |
| organelle organization | 1 |
| cellular process | 1 |
| ribonucleoside triphosphate phosphatase activity | 1 |
| structural molecule activity | 1 |
| metal ion binding | 1 |
| guanyl ribonucleotide binding | 1 |
| purine ribonucleoside triphosphate binding | 1 |
| nucleoside phosphate binding | 1 |
| heterocyclic compound binding | 1 |
| binding | 1 |
| cation binding | 1 |
| intracellular membrane-bounded organelle | 1 |
| intracellular anatomical structure | 1 |
| cytoplasm | 1 |
| microtubule cytoskeleton | 1 |
| polymeric cytoskeletal fiber | 1 |
| microtubule | 1 |
| ciliary plasm | 1 |
| main axon | 1 |
| somatodendritic compartment | 1 |
| cell body | 1 |
| extracellular vesicle | 1 |
| spindle | 1 |
| intracellular membraneless organelle | 1 |
| intraciliary transport particle | 1 |
| membrane-bounded organelle | 1 |
| plasma membrane bounded cell projection | 1 |
Protein interactions and networks
STRING
4574 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| TUBB4A | TOR1A | O14656 | 895 |
| TUBB4A | TUBA1B | P04687 | 860 |
| TUBB4A | TUBA1C | Q9BQE3 | 860 |
| TUBB4A | TUBA4A | P05215 | 819 |
| TUBB4A | TUBAL3 | A6NHL2 | 809 |
| TUBB4A | TUBA3E | Q6PEY2 | 809 |
| TUBB4A | TUBA8 | Q9NY65 | 809 |
| TUBB4A | TUBA1B | P04687 | 808 |
| TUBB4A | TUBA3C | P0DPH7 | 808 |
| TUBB4A | THAP1 | Q9NVV9 | 670 |
| TUBB4A | POTEF | A5A3E0 | 650 |
| TUBB4A | ACTB | P02570 | 643 |
| TUBB4A | GNAL | P38405 | 618 |
| TUBB4A | ANO3 | Q9BYT9 | 597 |
| TUBB4A | CIZ1 | Q9ULV3 | 596 |
IntAct
225 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| CFTR | ESYT2 | psi-mi:“MI:2364”(proximity) | 0.710 |
| TUBB | PLD2 | psi-mi:“MI:0914”(association) | 0.640 |
| MAPK7 | PFDN6 | psi-mi:“MI:0914”(association) | 0.640 |
| RAF1 | CALU | psi-mi:“MI:0914”(association) | 0.640 |
| TJP1 | ACTN4 | psi-mi:“MI:0914”(association) | 0.600 |
| ILK | HAX1 | psi-mi:“MI:0914”(association) | 0.530 |
| NEURL4 | APBB1 | psi-mi:“MI:0914”(association) | 0.530 |
| MAPT | KIF2A | psi-mi:“MI:0914”(association) | 0.530 |
| CCNJL | PIK3C2A | psi-mi:“MI:0914”(association) | 0.530 |
| LRP1 | NME4 | psi-mi:“MI:0914”(association) | 0.530 |
| TSPYL6 | NME4 | psi-mi:“MI:0914”(association) | 0.530 |
| ARL2 | TUBB4A | psi-mi:“MI:0914”(association) | 0.530 |
| CCT6A | TXNDC9 | psi-mi:“MI:0914”(association) | 0.530 |
| TUBB2A | EML2 | psi-mi:“MI:0914”(association) | 0.530 |
| TPSB2 | TUBB4A | psi-mi:“MI:0914”(association) | 0.530 |
| FAM174A | BLTP3B | psi-mi:“MI:0914”(association) | 0.530 |
| TUBB3 | POTEF | psi-mi:“MI:0914”(association) | 0.530 |
| P/V | IRS4 | psi-mi:“MI:0914”(association) | 0.530 |
| NR4A1 | TUBB4A | psi-mi:“MI:0915”(physical association) | 0.520 |
| FLT4 | ILVBL | psi-mi:“MI:0914”(association) | 0.420 |
| TUBB4A | RPS6KB1 | psi-mi:“MI:0915”(physical association) | 0.400 |
| SELENOF | TUBB4A | psi-mi:“MI:0915”(physical association) | 0.370 |
| TUBB4A | SPG11 | psi-mi:“MI:0915”(physical association) | 0.370 |
| OTUB1 | EPM2A | psi-mi:“MI:0914”(association) | 0.350 |
| Ruvbl1 | AAR2 | psi-mi:“MI:0914”(association) | 0.350 |
| TINF2 | SIRT2 | psi-mi:“MI:0914”(association) | 0.350 |
| NFKB1 | NFKB1 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (339): TUBB4A (Affinity Capture-Western), TUBB4A (Affinity Capture-MS), TUBB4A (Affinity Capture-MS), TUBB4A (Affinity Capture-MS), TUBB4A (Affinity Capture-MS), TUBB4A (Affinity Capture-MS), TUBB4A (Affinity Capture-MS), TUBA1C (Co-fractionation), TUBA3E (Co-fractionation), TUBA4A (Co-fractionation), TUBB4A (Two-hybrid), TUBB4A (Proximity Label-MS), TUBB4A (Affinity Capture-MS), TUBB4A (Affinity Capture-MS), TUBB4A (Affinity Capture-MS)
ESM2 similar proteins: A6NNZ2, P02554, P04350, P07437, P09206, P09244, P09652, P11833, P11857, P14643, P18025, P30156, P61857, P61858, P68371, P69893, P69895, P69897, P83130, P99024, Q08115, Q13509, Q24560, Q27U48, Q2HJ81, Q2KJD0, Q2T9S0, Q3MHM5, Q3ZBU7, Q3ZCM7, Q4QRB4, Q4R4X8, Q5R943, Q60HC2, Q6GLE7, Q6P9T8, Q6VAF4, Q767L7, Q7JJU6, Q7KQL5
Diamond homologs: A2AQ07, A6NNZ2, O04386, O17449, O44388, P02554, P04350, P04690, P07436, P07437, P08841, P09203, P09206, P09207, P09244, P09652, P09653, P10876, P10878, P11482, P11833, P11857, P12456, P13602, P14643, P18241, P20365, P22852, P30883, P32882, P33188, P34108, P36221, P37832, P41352, P41387, P41937, P46265, P50261, P50262
SIGNOR signaling
2 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| NUMA1 | up-regulates | TUBB4A | binding |
| “Vincristine sulfate” | “down-regulates activity” | TUBB4A | “chemical inhibition” |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 244 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| RIP-mediated NFkB activation via ZBP1 | 9 | 36.6× | 8e-11 |
| Formation of tubulin folding intermediates by CCT/TriC | 11 | 28.2× | 2e-11 |
| TRAF6 mediated NF-kB activation | 10 | 27.7× | 9e-11 |
| Cooperation of Prefoldin and TriC/CCT in actin and tubulin folding | 11 | 27.2× | 2e-11 |
| TNF signaling | 9 | 23.1× | 7e-09 |
| Post-chaperonin tubulin folding pathway | 8 | 23.1× | 5e-08 |
| Microtubule-dependent trafficking of connexons from Golgi to the plasma membrane | 7 | 23.1× | 4e-07 |
| Transport of connexons to the plasma membrane | 7 | 23.1× | 4e-07 |
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| non-canonical NF-kappaB signal transduction | 13 | 51.2× | 9e-18 |
| canonical NF-kappaB signal transduction | 17 | 29.1× | 6e-18 |
| tumor necrosis factor-mediated signaling pathway | 14 | 21.6× | 9e-13 |
| interleukin-1-mediated signaling pathway | 5 | 18.8× | 6e-04 |
| response to muscle stretch | 5 | 17.9× | 8e-04 |
| toll-like receptor 4 signaling pathway | 7 | 17.2× | 3e-05 |
| cytoplasmic microtubule organization | 7 | 11.2× | 4e-04 |
| obsolete positive regulation of NF-kappaB transcription factor activity | 10 | 9.6× | 3e-05 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
355 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 8 |
| Likely pathogenic | 24 |
| Uncertain significance | 132 |
| Likely benign | 117 |
| Benign | 25 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 267773 | NM_006087.4(TUBB4A):c.4C>T (p.Arg2Trp) | Pathogenic |
| 267777 | NM_006087.4(TUBB4A):c.731G>T (p.Gly244Val) | Pathogenic |
| 267781 | NM_006087.3:c.900C>A | Pathogenic |
| 267792 | NM_006087.4(TUBB4A):c.1164G>A (p.Met388Ile) | Pathogenic |
| 2843042 | NM_006087.4(TUBB4A):c.755A>G (p.Lys252Arg) | Pathogenic |
| 372789 | NM_006087.4(TUBB4A):c.535G>C (p.Val179Leu) | Pathogenic |
| 3769850 | NM_006087.4(TUBB4A):c.1164G>T (p.Met388Ile) | Pathogenic |
| 803516 | NM_006087.4(TUBB4A):c.730G>C (p.Gly244Arg) | Pathogenic |
| 1033070 | NM_006087.4(TUBB4A):c.854C>A (p.Thr285Lys) | Likely pathogenic |
| 1256060 | NM_006087.4(TUBB4A):c.796T>A (p.Phe266Ile) | Likely pathogenic |
| 139453 | NM_006087.4(TUBB4A):c.533C>G (p.Thr178Arg) | Likely pathogenic |
| 1450009 | NM_006087.4(TUBB4A):c.736C>A (p.Leu246Met) | Likely pathogenic |
| 1694453 | NM_006087.4(TUBB4A):c.544C>T (p.Pro182Ser) | Likely pathogenic |
| 1805115 | NM_006087.4(TUBB4A):c.493A>G (p.Asn165Asp) | Likely pathogenic |
| 2442020 | NM_006087.4(TUBB4A):c.211G>A (p.Gly71Ser) | Likely pathogenic |
| 267780 | NM_006087.4(TUBB4A):c.874C>A (p.Gln292Lys) | Likely pathogenic |
| 267789 | NM_006087.4(TUBB4A):c.1099T>C (p.Phe367Leu) | Likely pathogenic |
| 267790 | NM_006087.4(TUBB4A):c.1162A>G (p.Met388Val) | Likely pathogenic |
| 3336788 | NM_006087.4(TUBB4A):c.1052C>T (p.Thr351Met) | Likely pathogenic |
| 3600322 | NM_006087.4(TUBB4A):c.287G>T (p.Gly96Val) | Likely pathogenic |
| 453295 | NM_006087.4(TUBB4A):c.1062C>G (p.Cys354Trp) | Likely pathogenic |
| 4533373 | NM_006087.4(TUBB4A):c.898A>G (p.Met300Val) | Likely pathogenic |
| 4813348 | NM_006087.4(TUBB4A):c.937G>T (p.Val313Leu) | Likely pathogenic |
| 4819874 | NM_006087.4(TUBB4A):c.784C>T (p.Arg262Cys) | Likely pathogenic |
| 580978 | NM_006087.4(TUBB4A):c.686T>C (p.Val229Ala) | Likely pathogenic |
| 689794 | NM_006087.4(TUBB4A):c.1181T>C (p.Phe394Ser) | Likely pathogenic |
| 807518 | NM_006087.4(TUBB4A):c.1065C>A (p.Asp355Glu) | Likely pathogenic |
| 807519 | NM_006087.4(TUBB4A):c.1054G>T (p.Ala352Ser) | Likely pathogenic |
| 871906 | NM_006087.4(TUBB4A):c.1049A>C (p.Lys350Thr) | Likely pathogenic |
| 930298 | NM_006087.4(TUBB4A):c.1021T>C (p.Phe341Leu) | Likely pathogenic |
SpliceAI
533 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 19:6496217:TTGGC:T | acceptor_gain | 1.0000 |
| 19:6496218:TGGC:T | acceptor_gain | 1.0000 |
| 19:6496219:GGC:G | acceptor_gain | 1.0000 |
| 19:6496220:GC:G | acceptor_gain | 1.0000 |
| 19:6496221:CC:C | acceptor_gain | 1.0000 |
| 19:6496221:CCTA:C | acceptor_loss | 1.0000 |
| 19:6496222:C:CC | acceptor_gain | 1.0000 |
| 19:6496222:C:G | acceptor_loss | 1.0000 |
| 19:6496223:T:G | acceptor_loss | 1.0000 |
| 19:6501281:ACTC:A | donor_loss | 1.0000 |
| 19:6501282:CTCA:C | donor_loss | 1.0000 |
| 19:6501283:TCACC:T | donor_loss | 1.0000 |
| 19:6501284:CAC:C | donor_loss | 1.0000 |
| 19:6501285:A:AC | donor_gain | 1.0000 |
| 19:6501285:A:C | donor_loss | 1.0000 |
| 19:6501286:C:CC | donor_gain | 1.0000 |
| 19:6501286:C:T | donor_loss | 1.0000 |
| 19:6501393:TCCTC:T | acceptor_gain | 1.0000 |
| 19:6501394:CCTC:C | acceptor_gain | 1.0000 |
| 19:6501394:CCTCC:C | acceptor_gain | 1.0000 |
| 19:6501395:CTC:C | acceptor_gain | 1.0000 |
| 19:6501395:CTCC:C | acceptor_gain | 1.0000 |
| 19:6501396:TC:T | acceptor_gain | 1.0000 |
| 19:6501396:TCCT:T | acceptor_gain | 1.0000 |
| 19:6501397:CC:C | acceptor_gain | 1.0000 |
| 19:6501398:C:CC | acceptor_gain | 1.0000 |
| 19:6501398:CTG:C | acceptor_loss | 1.0000 |
| 19:6501401:C:CT | acceptor_gain | 1.0000 |
| 19:6501510:CCTA:C | donor_loss | 1.0000 |
| 19:6501511:CTAC:C | donor_loss | 1.0000 |
AlphaMissense
2954 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 19:6495235:A:G | Y422H | 1.000 |
| 19:6495246:A:G | L418P | 1.000 |
| 19:6495249:T:A | D417V | 1.000 |
| 19:6495250:C:G | D417H | 1.000 |
| 19:6495268:C:G | A411P | 1.000 |
| 19:6495275:G:C | F408L | 1.000 |
| 19:6495275:G:T | F408L | 1.000 |
| 19:6495276:A:G | F408S | 1.000 |
| 19:6495277:A:G | F408L | 1.000 |
| 19:6495291:A:G | M403T | 1.000 |
| 19:6495295:C:G | G402R | 1.000 |
| 19:6495310:A:G | W397R | 1.000 |
| 19:6495310:A:T | W397R | 1.000 |
| 19:6495313:G:C | H396D | 1.000 |
| 19:6495317:G:C | F394L | 1.000 |
| 19:6495317:G:T | F394L | 1.000 |
| 19:6495318:A:G | F394S | 1.000 |
| 19:6495319:A:G | F394L | 1.000 |
| 19:6495319:A:T | F394I | 1.000 |
| 19:6495344:G:C | F385L | 1.000 |
| 19:6495344:G:T | F385L | 1.000 |
| 19:6495346:A:G | F385L | 1.000 |
| 19:6495389:G:C | N370K | 1.000 |
| 19:6495389:G:T | N370K | 1.000 |
| 19:6495465:A:G | I345T | 1.000 |
| 19:6495467:C:A | W344C | 1.000 |
| 19:6495467:C:G | W344C | 1.000 |
| 19:6495469:A:G | W344R | 1.000 |
| 19:6495469:A:T | W344R | 1.000 |
| 19:6495567:A:G | L311P | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000087027 (19:6494506 G>C), RS1000647524 (19:6496492 G>A), RS1000767321 (19:6504493 G>T), RS1001178554 (19:6495362 C>G,T), RS1002189307 (19:6494357 A>G,T), RS1002198900 (19:6499894 C>G), RS1002301585 (19:6500001 G>T), RS1002698276 (19:6500111 G>A), RS1003146368 (19:6498842 T>C), RS1003362960 (19:6504679 A>G,T), RS1004162746 (19:6497253 C>A,T), RS1004382616 (19:6496660 T>A), RS1004531669 (19:6498053 T>C), RS1004630955 (19:6504107 G>A,C), RS1004776318 (19:6503219 C>A,G,T)
Disease associations
OMIM: gene MIM:602662 | disease phenotypes: MIM:612438, MIM:128101, MIM:312080, MIM:616407, MIM:303350
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| hypomyelinating leukodystrophy 6 | Definitive | Autosomal dominant |
| torsion dystonia 4 | Strong | Autosomal dominant |
| TUBB4A-related neurologic disorder | Moderate | Autosomal dominant |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| TUBB4A-related neurologic disorder | Definitive | AD |
Mondo (12): hypomyelinating leukodystrophy 6 (MONDO:0012905), torsion dystonia 4 (MONDO:0007493), cerebral palsy (MONDO:0006497), classic medulloblastoma (MONDO:0016712), microcephaly (MONDO:0001149), leukodystrophy (MONDO:0019046), TUBB4A-related neurologic disorder (MONDO:0800470), Brown syndrome (MONDO:0014624), frontotemporal dementia (MONDO:0017276), intellectual disability (MONDO:0001071), hereditary spastic paraplegia (MONDO:0019064), congenital nervous system disorder (MONDO:0002320)
Orphanet (7): Hypomyelination with atrophy of basal ganglia and cerebellum (Orphanet:139441), Primary dystonia, DYT4 type (Orphanet:98805), Classic medulloblastoma (Orphanet:251867), Leukodystrophy (Orphanet:68356), Frontotemporal dementia (Orphanet:282), Hereditary spastic paraplegia (Orphanet:685), NON RARE IN EUROPE: Unexplained intellectual disability (Orphanet:319658)
HPO phenotypes
56 total (30 of 56 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000182 | Movement abnormality of the tongue |
| HP:0000194 | Open mouth |
| HP:0000252 | Microcephaly |
| HP:0000275 | Narrow face |
| HP:0000473 | Torticollis |
| HP:0000505 | Visual impairment |
| HP:0000571 | Hypometric saccades |
| HP:0000639 | Nystagmus |
| HP:0000643 | Blepharospasm |
| HP:0000648 | Optic atrophy |
| HP:0000657 | Oculomotor apraxia |
| HP:0000726 | Dementia |
| HP:0000750 | Delayed speech and language development |
| HP:0001249 | Intellectual disability |
| HP:0001250 | Seizure |
| HP:0001251 | Ataxia |
| HP:0001252 | Hypotonia |
| HP:0001257 | Spasticity |
| HP:0001260 | Dysarthria |
| HP:0001266 | Choreoathetosis |
| HP:0001270 | Motor delay |
| HP:0001272 | Cerebellar atrophy |
| HP:0001288 | Gait disturbance |
| HP:0001304 | Torsion dystonia |
| HP:0001328 | Specific learning disability |
| HP:0001332 | Dystonia |
| HP:0001337 | Tremor |
| HP:0001533 | Slender build |
| HP:0001618 | Dysphonia |
GWAS associations
2 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST90010427_25 | Left–right brain asymmetry | 6.000000e-10 |
| GCST90013421_20 | Left-handedness | 6.000000e-12 |
EFO canonical traits (1, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0009902 | handedness |
MeSH disease descriptors (6)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D002547 | Cerebral Palsy | C10.228.140.140.254 |
| D057180 | Frontotemporal Dementia | C10.228.140.380.266.299; C10.574.950.300.299; C18.452.845.800.300.299; F03.615.400.380.299 |
| D008607 | Intellectual Disability | C10.597.606.360; C23.888.592.604.646; F01.700.687; F03.625.539 |
| D008831 | Microcephaly | C05.660.207.620; C10.500.507.400.500; C16.131.621.207.620; C16.131.666.507.400.500 |
| D015419 | Spastic Paraplegia, Hereditary | C10.500.300.820; C10.574.500.495.820; C10.668.829.800.300.820; C16.131.666.300.820; C16.320.400.375.820 |
| C567314 | Leukodystrophy, Hypomyelinating, 6 (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (4): CHEMBL2095182 (PROTEIN COMPLEX GROUP), CHEMBL3832942 (PROTEIN FAMILY), CHEMBL3838 (SINGLE PROTEIN), CHEMBL6066847 (PROTEIN-PROTEIN INTERACTION)
Molecules with ChEMBL bioactivity
21 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 1,641,397 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL107 | COLCHICINE | 4 | 93,932 |
| CHEMBL159 | VINBLASTINE | 4 | 412,636 |
| CHEMBL33 | LEVOFLOXACIN ANHYDROUS | 4 | 43,403 |
| CHEMBL3545252 | DOCETAXEL | 4 | 1,009 |
| CHEMBL364713 | NOSCAPINE | 4 | 14,987 |
| CHEMBL378544 | VINBLASTINE SULFATE | 4 | 32,829 |
| CHEMBL428647 | PACLITAXEL | 4 | 332,542 |
| CHEMBL5315124 | LEVOFLOXACIN | 4 | 189 |
| CHEMBL553025 | VINORELBINE | 4 | 142,159 |
| CHEMBL571546 | TIRBANIBULIN | 4 | 1,192 |
| CHEMBL61 | PODOFILOX | 4 | 37,640 |
| CHEMBL90555 | VINCRISTINE | 4 | 268,031 |
| CHEMBL92 | DOCETAXEL ANHYDROUS | 4 | 196,686 |
| CHEMBL94657 | PATUPILONE | 3 | 14,934 |
| CHEMBL20684 | ABT-751 | 2 | 2,238 |
| CHEMBL292702 | MAYTANSINE | 2 | 9,300 |
| CHEMBL39541 | DOLASTATIN-10 | 2 | 1,380 |
| CHEMBL49642 | INDIBULIN | 2 | 963 |
| CHEMBL528271 | PARBENDAZOLE | 2 | 6,102 |
| CHEMBL9514 | NOCODAZOLE | 2 | 29,245 |
| CHEMBL246600 | COMBRETASTATIN | 1 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
ChEMBL bioactivities
1170 potent at pChembl≥5 of 1321 total, top 50 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
PubChem BioAssay actives
1098 with measured affinity, of 5890 total; 50 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| (Z)-1-[4-bromo-2-(4-fluorophenyl)-1-benzofuran-7-yl]-3-(4-methoxyphenyl)prop-2-en-1-one | 1882651: Inhibition of tubulin polymerization (unknown origin) measured every 3 secs for 1 hr by spectroflourimetric analysis | ic50 | 0.0001 | uM |
| (Z)-1-[4-bromo-2-(4-fluorophenyl)-1-benzofuran-7-yl]-3-[4-(trifluoromethoxy)phenyl]prop-2-en-1-one | 1882651: Inhibition of tubulin polymerization (unknown origin) measured every 3 secs for 1 hr by spectroflourimetric analysis | ic50 | 0.0002 | uM |
| Vinorelbine | 1993632: Inhibition of tubulin polymerization (unknown origin) | ic50 | 0.0003 | uM |
| (2S)-2-[[(2S)-2-(dimethylamino)-3-methylbutanoyl]amino]-N-[(3R,4S,5S)-3-methoxy-1-[(2S)-2-[(1R,2R)-1-methoxy-2-methyl-3-oxo-3-[[(1S)-2-phenyl-1-(1,3-thiazol-2-yl)ethyl]amino]propyl]pyrrolidin-1-yl]-5-methyl-1-oxoheptan-4-yl]-N,3-dimethylbutanamide | 270819: Inhibition of tubulin polymerization | ic50 | 0.0005 | uM |
| (2S)-2-[[(2S)-2-(dimethylamino)-3-methylbutanoyl]amino]-N-[(3R,4S,5S)-3-methoxy-1-[(2S)-2-[(1R,2R)-1-methoxy-2-methyl-3-oxo-3-(2-pyridin-2-ylethylamino)propyl]pyrrolidin-1-yl]-5-methyl-1-oxoheptan-4-yl]-N,3-dimethylbutanamide | 1896115: Binding affinity to tubulin (unknown origin) | ic50 | 0.0012 | uM |
| (3Z,6Z)-3-[(5-tert-butyl-1H-imidazol-4-yl)methylidene]-6-phenacylidenepiperazine-2,5-dione | 1587857: Inhibition of tubulin polymerization (unknown origin) | ic50 | 0.0014 | uM |
| (3Z,6Z)-3-[(5-tert-butyl-1H-imidazol-4-yl)methylidene]-6-[(2,5-difluorophenyl)methylidene]piperazine-2,5-dione | 1587857: Inhibition of tubulin polymerization (unknown origin) | ic50 | 0.0026 | uM |
| 3-hydroxy-2-[N-[2-(methoxymethyl)-1-benzofuran-7-yl]-C-methylcarbonimidoyl]-5-phenylcyclohex-2-en-1-one | 2034736: Displacement of fluorescent probe (R)-(+)-ethyl 5-amino2-methyl-1,2-dihydro-3-phenylpyrido[3,4-b]pyrazin-7-ylcarbamate from tubulin colchicine binding site (unknown origin) assessed as dissociation constant | kd | 0.0030 | uM |
| 2-methoxy-5-[(Z)-2-(3,4,5-trimethoxyphenyl)ethenyl]phenol | 1862628: Inhibition of tubulin polymerization in human HeLa cells assessed as microtubule network polymerization after 30 mins by immunofluorescence analysis | ic50 | 0.0030 | uM |
| Colchicine | 2074087: Inhibition of microtubule polymerization in human K562 cells measured for 60 mins by fluorescence based analysis | ic50 | 0.0030 | uM |
| (1S,3S,7S,10R,11S,12S,16R)-7,11-dihydroxy-8,8,10,12,16-pentamethyl-3-[(E)-1-(2-methyl-1,3-thiazol-4-yl)prop-1-en-2-yl]-4,17-dioxabicyclo[14.1.0]heptadecane-5,9-dione | 1408257: Inhibition of tubulin polymerization in human MCF7 cells assessed as induction of mitotic arrest | ic50 | 0.0035 | uM |
| tert-butyl (3R,4S,5S)-4-[[(2S)-2-[[(2S)-2-(dimethylamino)-3-methylbutanoyl]amino]-3-methylbutanoyl]-methylamino]-3-methoxy-5-methylheptanoate | 1896110: Inhibition of tubulin (unknown origin) polymerization assessed as reduction in microtubule formation measured for 20 mins by spectrophotometric analysis | ic50 | 0.0042 | uM |
| 3-methoxy-6-[4-(3,4,5-trimethoxyphenyl)-1H-pyrazol-5-yl]benzene-1,2-diol | 1929685: Inhibition of tubulin polymerization in human SH-SY5Y cells incubated for 24 hrs by SDS-PAGE based analysis | ic50 | 0.0054 | uM |
| 2-methoxy-5-[1-(3,4,5-trimethoxyphenyl)ethenyl]phenol | 1862628: Inhibition of tubulin polymerization in human HeLa cells assessed as microtubule network polymerization after 30 mins by immunofluorescence analysis | ic50 | 0.0060 | uM |
| 4-methyl-3-[(1-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2149956: Binding affinity to human TUBB4A incubated for 45 mins by Kinobead based pull down assay | kd | 0.0063 | uM |
| (E)-1-[1-(4-chlorophenyl)-5-methyltriazol-4-yl]-3-(3,4-dimethoxyphenyl)prop-2-en-1-one | 1689700: Inhibition of Tubulin in human RPMI-8226 cells incubated for 2 hrs by ELISA | ic50 | 0.0098 | uM |
| N-(1,3-benzodioxol-5-yl)-5-[2-(3,5-dimethoxyphenoxy)-3-pyridinyl]-1H-1,2,4-triazol-3-amine | 256882: Displacement of [3H]colchicine from tubulin | ki | 0.0100 | uM |
| N-(2,3-dihydro-1,4-benzodioxin-6-yl)-5-[2-(pyridin-2-ylmethylamino)phenyl]-1,3-oxazol-2-amine | 261214: Displacement of [3H]colchicine from tubulin at 65 nM | ic50 | 0.0100 | uM |
| [(1S,2R,3S,5R,6S,16E,18E,20R,21S)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.110,14.03,5]hexacosa-10,12,14(26),16,18-pentaen-6-yl] acetate | 2126113: Displacement of fluorescent Maytansine probe from tubulin (unknown origin) assessed as dissociation constant by competitive binding based fluorescence anisotropy | kd | 0.0110 | uM |
| [(1S,2R,3S,5S,6S,16E,18E,20R,21S)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.110,14.03,5]hexacosa-10,12,14(26),16,18-pentaen-6-yl] (2S)-2-[acetyl(methyl)amino]propanoate | 2126113: Displacement of fluorescent Maytansine probe from tubulin (unknown origin) assessed as dissociation constant by competitive binding based fluorescence anisotropy | kd | 0.0140 | uM |
| N-(2,3-dihydro-1,4-benzodioxin-6-yl)-5-[2-(3,5-dimethoxyphenoxy)-3-pyridinyl]-1H-1,2,4-triazol-3-amine | 256882: Displacement of [3H]colchicine from tubulin | ki | 0.0200 | uM |
| methyl (13S,15S,17S)-13-[(1R,9R,10S,11R,12R,19R)-10-(1-diethoxyphosphorylhexylcarbamoyl)-12-ethyl-10,11-dihydroxy-5-methoxy-8-methyl-8,16-diazapentacyclo[10.6.1.01,9.02,7.016,19]nonadeca-2,4,6,13-tetraen-4-yl]-17-ethyl-17-hydroxy-1,11-diazatetracyclo[13.3.1.04,12.05,10]nonadeca-4(12),5,7,9-tetraene-13-carboxylate | 214333: The compound tested for the inhibition of tubulin polymerization. | ic50 | 0.0200 | uM |
| (E)-3-[5-[(2-cyanoquinolin-4-yl)-methylamino]-2-methoxyphenyl]-N-hydroxyprop-2-enamide | 1862628: Inhibition of tubulin polymerization in human HeLa cells assessed as microtubule network polymerization after 30 mins by immunofluorescence analysis | ic50 | 0.0200 | uM |
| [(1S,2R,3S,5R,6S,16E,18E,20R,21S)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.110,14.03,5]hexacosa-10,12,14(26),16,18-pentaen-6-yl] hept-6-ynoate | 2126113: Displacement of fluorescent Maytansine probe from tubulin (unknown origin) assessed as dissociation constant by competitive binding based fluorescence anisotropy | kd | 0.0200 | uM |
| (3S)-3-[(5R)-6-[[1-(4-fluorophenyl)triazol-4-yl]methyl]-4-methoxy-7,8-dihydro-5H-[1,3]dioxolo[4,5-g]isoquinolin-5-yl]-6,7-dimethoxy-3H-2-benzofuran-1-one | 1675128: Binding affinity to CM5 chip immobilized beta tubulin (unknown origin) assessed as thermodynamic constants by SPR assay | kd | 0.0215 | uM |
| N-(4-methoxyphenyl)-N,5-dimethylfuro[2,3-d]pyrimidin-4-amine | 1635267: Induction of microtubule depolymerization in human A10 cells incubated for 18 hrs by indirect immunofluorescence analysis | ec50 | 0.0240 | uM |
| [4-amino-2-(4-methoxyanilino)-1,3-thiazol-5-yl]-(3,4-dimethoxyphenyl)methanone | 1674862: Binding affinity to beta tubulin in HEK293 cells assessed as disruption of microtubule polymerization by ITDRF-CETSA assay | ic50 | 0.0250 | uM |
| N-(2,3-dihydro-1,4-benzodioxin-6-yl)-5-[2-(pyridin-3-ylmethylamino)-3-pyridinyl]-1,3,4-oxadiazol-2-amine | 261214: Displacement of [3H]colchicine from tubulin at 65 nM | ic50 | 0.0300 | uM |
| N-(1,3-benzodioxol-5-yl)-5-[2-(pyridin-4-ylmethylamino)-3-pyridinyl]-1,3,4-oxadiazol-2-amine | 261214: Displacement of [3H]colchicine from tubulin at 65 nM | ic50 | 0.0300 | uM |
| N-(1,3-benzodioxol-5-yl)-5-[2-(pyridin-2-ylmethylamino)-3-pyridinyl]-1,3,4-oxadiazol-2-amine | 261214: Displacement of [3H]colchicine from tubulin at 65 nM | ic50 | 0.0300 | uM |
| Paclitaxel | 260235: Effect on induction of mitotic arrest by phosphohistone H3 (pH3) assay | ec50 | 0.0310 | uM |
| (3S)-3-[(5R)-9-bromo-6-[[1-(4-bromophenyl)triazol-4-yl]methyl]-4-methoxy-7,8-dihydro-5H-[1,3]dioxolo[4,5-g]isoquinolin-5-yl]-6,7-dimethoxy-3H-2-benzofuran-1-one | 1675128: Binding affinity to CM5 chip immobilized beta tubulin (unknown origin) assessed as thermodynamic constants by SPR assay | kd | 0.0369 | uM |
| 6-(3-chloro-6,11,11-trioxobenzo[b][1,4]benzothiazepin-5-yl)-N-hydroxyhexanamide | 580932: Inhibition of HDAC activity in human NB4 cells assessed as acetylated tubulin after 24 hrs by Western blot analysis | ec50 | 0.0400 | uM |
| N,5-dimethyl-N-(4-methylsulfanylphenyl)furo[2,3-d]pyrimidin-4-amine | 1635267: Induction of microtubule depolymerization in human A10 cells incubated for 18 hrs by indirect immunofluorescence analysis | ec50 | 0.0450 | uM |
| [7-(3-hydroxyprop-1-ynyl)-6-methoxy-2H-indazol-3-yl]-(3,4,5-trimethoxyphenyl)methanone | 280080: Displacement of [3H]colchicine from tubulin in MCF7 cells | ic50 | 0.0460 | uM |
| (3S,10R,13E,16S)-10-[(3-chloro-4-methoxyphenyl)methyl]-6,6-dimethyl-3-(2-methylpropyl)-16-[(1S)-1-[(2R,3S)-3-phenyloxiran-2-yl]ethyl]-1,4-dioxa-8,11-diazacyclohexadec-13-ene-2,5,9,12-tetrone | 2061859: Binding affinity to tubulin (unknown origin) assessed as dissociation constant by SPR analysis | kd | 0.0470 | uM |
| N-hydroxy-6-(3-methoxy-6,11,11-trioxobenzo[b][1,4]benzothiazepin-5-yl)hexanamide | 580932: Inhibition of HDAC activity in human NB4 cells assessed as acetylated tubulin after 24 hrs by Western blot analysis | ec50 | 0.0500 | uM |
| N-hydroxy-6-(6,11,11-trioxobenzo[b][1,4]benzothiazepin-5-yl)hexanamide | 580932: Inhibition of HDAC activity in human NB4 cells assessed as acetylated tubulin after 24 hrs by Western blot analysis | ec50 | 0.0500 | uM |
| 5-[2-(3,5-dimethoxyphenoxy)-3-pyridinyl]-N-(3-methoxyphenyl)-1H-1,2,4-triazol-3-amine | 256882: Displacement of [3H]colchicine from tubulin | ki | 0.0500 | uM |
| [(1S,2R,3S,5R,6S,16E,18E,20R,21S)-11-chloro-21-hydroxy-12,20-dimethoxy-2,5,9,16-tetramethyl-8,23-dioxo-4,24-dioxa-9,22-diazatetracyclo[19.3.1.110,14.03,5]hexacosa-10,12,14(26),16,18-pentaen-6-yl] benzoate | 2126113: Displacement of fluorescent Maytansine probe from tubulin (unknown origin) assessed as dissociation constant by competitive binding based fluorescence anisotropy | kd | 0.0510 | uM |
| N-ethyl-N-(4-methoxyphenyl)-5-methylfuro[2,3-d]pyrimidin-4-amine | 1635267: Induction of microtubule depolymerization in human A10 cells incubated for 18 hrs by indirect immunofluorescence analysis | ec50 | 0.0530 | uM |
| 3-[3-(1,3-benzodioxol-5-ylamino)-1H-1,2,4-triazol-5-yl]-N-(3,5-dimethoxyphenyl)pyridin-2-amine | 256882: Displacement of [3H]colchicine from tubulin | ki | 0.0600 | uM |
| Vinblastine | 214333: The compound tested for the inhibition of tubulin polymerization. | ic50 | 0.0700 | uM |
| methyl (13S,15S,17S)-13-[(1R,9R,10S,11R,12R,19R)-10-[(1-diethoxyphosphoryl-2-phenylethyl)carbamoyl]-12-ethyl-10,11-dihydroxy-5-methoxy-8-methyl-8,16-diazapentacyclo[10.6.1.01,9.02,7.016,19]nonadeca-2,4,6,13-tetraen-4-yl]-17-ethyl-17-hydroxy-1,11-diazatetracyclo[13.3.1.04,12.05,10]nonadeca-4(12),5,7,9-tetraene-13-carboxylate | 214333: The compound tested for the inhibition of tubulin polymerization. | ic50 | 0.0700 | uM |
| N-(2,3-dihydro-1,4-benzodioxin-6-yl)-5-[3-(pyridin-2-ylmethylamino)thiophen-2-yl]-1,3,4-oxadiazol-2-amine | 261214: Displacement of [3H]colchicine from tubulin at 65 nM | ic50 | 0.0750 | uM |
| methyl (13S,15S,17S)-13-[(1R,9R,10S,11R,12R,19R)-10-[[(1S)-1-diethoxyphosphorylethyl]carbamoyl]-12-ethyl-10,11-dihydroxy-5-methoxy-8-methyl-8,16-diazapentacyclo[10.6.1.01,9.02,7.016,19]nonadeca-2,4,6,13-tetraen-4-yl]-17-ethyl-17-hydroxy-1,11-diazatetracyclo[13.3.1.04,12.05,10]nonadeca-4(12),5,7,9-tetraene-13-carboxylate | 214333: The compound tested for the inhibition of tubulin polymerization. | ic50 | 0.0800 | uM |
| 4-methoxy-2-[(Z)-2-(3,4,5-trimethoxyphenyl)ethenyl]thiophene | 1267532: Inhibition of Tubulin polymerization in human HeLa cells assessed as decrease in dynamic tyrosinated microtubules after 2 hrs by microplate reader analysis | ec50 | 0.0810 | uM |
| N-[2-[[(E)-(2,4-dihydroxyphenyl)methylideneamino]carbamoyl]phenyl]furan-2-carboxamide | 1882654: Inhibition of tubulin polymerization (unknown origin) | ic50 | 0.0876 | uM |
| N-hydroxy-6-(3-methoxy-6-oxobenzo[b][1,4]benzoxazepin-5-yl)hexanamide | 580932: Inhibition of HDAC activity in human NB4 cells assessed as acetylated tubulin after 24 hrs by Western blot analysis | ec50 | 0.0900 | uM |
| N-(3,5-dimethoxyphenyl)-3-[3-(3-methoxyanilino)-1H-1,2,4-triazol-5-yl]pyridin-2-amine | 256882: Displacement of [3H]colchicine from tubulin | ki | 0.1000 | uM |
CTD chemical–gene interactions
50 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| entinostat | increases expression, affects cotreatment | 2 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, increases expression | 2 |
| Rotenone | decreases expression | 2 |
| Valproic Acid | affects expression, increases methylation | 2 |
| aristolochic acid I | increases expression | 1 |
| 6,7-dimethoxy-2-(pyrrolidin-1-yl)-N-(5-(pyrrolidin-1-yl)pentyl)quinazolin-4-amine | decreases expression | 1 |
| FR900359 | increases phosphorylation | 1 |
| beauvericin | affects cotreatment, increases expression | 1 |
| triphenyl phosphate | affects expression | 1 |
| ethyl-p-hydroxybenzoate | decreases expression | 1 |
| trichostatin A | affects expression | 1 |
| arsenite | affects binding, increases reaction | 1 |
| sulforaphane | decreases expression | 1 |
| 11-nor-delta(9)-tetrahydrocannabinol-9-carboxylic acid | affects methylation, increases abundance | 1 |
| sodium arsenite | increases expression | 1 |
| tobacco tar | decreases expression, decreases reaction | 1 |
| diallyl disulfide | decreases expression, decreases reaction | 1 |
| S-(1,2-dichlorovinyl)cysteine | affects response to substance, increases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| perfluorooctane sulfonic acid | affects expression | 1 |
| enniatins | affects cotreatment, increases expression | 1 |
| poly(propyleneimine) | increases expression | 1 |
| abrine | decreases expression | 1 |
| dorsomorphin | affects cotreatment, increases expression | 1 |
| hexabrominated diphenyl ether 153 | decreases expression | 1 |
| perfluorobutanesulfonic acid | affects expression | 1 |
| LDN 193189 | affects cotreatment, increases expression | 1 |
| 4-(4-((5-(4,5-dimethyl-2-nitrophenyl)-2-furanyl)methylene)-4,5-dihydro-3-methyl-5-oxo-1H-pyrazol-1-yl)benzoic acid | decreases expression | 1 |
| Resveratrol | affects cotreatment, decreases expression | 1 |
| Sunitinib | decreases expression | 1 |
ChEMBL screening assays
1758 unique, capped per target: 1718 binding, 34 functional, 6 admet
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL1009021 | Binding | Inhibition of tubulin polymerization in human MCF7 cells at 1 uM after 2 hrs by SDS-PAGE | A new cytotoxic epothilone from modified polyketide synthases heterologously expressed in Myxococcus xanthus. — J Nat Prod |
| CHEMBL4146506 | ADMET | Inhibition of tubulin polymerization in human HaCaT cells assessed as chromatin condensation at 1 uM after 24 hrs by Hoechst 33258 staining-based fluorescence microscopic analysis | Design, synthesis, and biological evaluation of novel combretastatin A-4 thio derivatives as microtubule targeting agents. — Eur J Med Chem |
| CHEMBL5056161 | Functional | Inhibition of tubulin polymerization (unknown origin) assessed as fluorescence intensity measured for 90 mins by DAPI based microplate reader | Design, synthesis and biological evaluation of indole-based [1,2,4]triazolo[4,3-a] pyridine derivatives as novel microtubule polymerization inhibitors. — Eur J Med Chem |
Cellosaurus cell lines
3 cell lines: 3 induced pluripotent stem cell
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_B3NQ | CHOPi005-A | Induced pluripotent stem cell | Male |
| CVCL_B3NR | CHOPi006-A | Induced pluripotent stem cell | Male |
| CVCL_B3NS | CHOPi007-A | Induced pluripotent stem cell | Female |
Clinical trials (associated diseases)
300 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00154830 | PHASE4 | COMPLETED | Alterations of Functional Activities and Leg Stiffness After Hamstring Lengthening in Cerebral Palsy Children |
| NCT00432055 | PHASE4 | COMPLETED | Effects of Botulinum Toxin Type A in Adults With Cerebral Palsy |
| NCT00549471 | PHASE4 | TERMINATED | Improvement After Botulinum Toxin Injections to the Arms in Children With Cerebral Palsy |
| NCT00752934 | PHASE4 | TERMINATED | Does Oral Baclofen Improve Care and Comfort in Spastic Children in Nursing Homes? |
| NCT00964639 | PHASE4 | COMPLETED | Postoperative Pain in Children With Cerebral Palsy After Pelvic and Femoral Osteotomies |
| NCT01386255 | PHASE4 | WITHDRAWN | Placebo Controlled Study of Baclofen for GERD in Children With Cerebral Palsy |
| NCT02546999 | PHASE4 | COMPLETED | Does Botulinum Toxin A Make Walking Easier in Children With Cerebral Palsy? |
| NCT02633241 | PHASE4 | COMPLETED | A Pilot Study of Dexmedetomidine-Propofol in Children Undergoing Magnetic Resonance Imaging |
| NCT03117322 | PHASE4 | COMPLETED | Synbiotic, Prebiotics and Probiotics in Children With Cerebral Palsy and Constipation |
| NCT03648658 | PHASE4 | UNKNOWN | Paracetamol Study in Patients With Low Muscle Mass |
| NCT04074265 | PHASE4 | COMPLETED | Peri-operative Use of a Pain Injection in Pediatric Patients With Cerebral Palsy |
| NCT04273737 | PHASE4 | TERMINATED | Amantadine in Treating Cognitive & Motor Impairments in Adolescents and Adults With Cerebral Palsy |
| NCT04523935 | PHASE4 | COMPLETED | Excessive Crying in Children With Cerebral Palsy and Communication Deficits |
| NCT05887765 | PHASE4 | COMPLETED | Effect of Systematic Dexamethasone on the Duration of Popliteal Nerve Block for Anesthesia After Pediatric Ankle Surgery |
| NCT06176430 | PHASE4 | UNKNOWN | Comparison of Twice Weekly Versus Daily Iron Therapy in Treating Anemia in Children With Cerebral Palsy |
| NCT06189781 | PHASE4 | RECRUITING | Pain Injection Versus Epidural Anesthesia for Hip Surgery in Pediatric Patients With Cerebral Palsy |
| NCT00014989 | PHASE3 | COMPLETED | Beneficial Effects of Antenatal Magnesium Sulfate (BEAM Trial) |
| NCT00065949 | PHASE3 | UNKNOWN | Magnesium Sulfate to Prevent Brain Injury in Premature Infants |
| NCT00367068 | PHASE3 | COMPLETED | Dutch National ITB Study in Children With Cerebral Palsy |
| NCT00491894 | PHASE3 | COMPLETED | Safety and Efficacy Study of Oral Glycopyrrolate Liquid for the Treatment of Pathologic (Chronic Moderate to Severe) Drooling in Pediatric Patients 3 to 18 Years of Age With Cerebral Palsy or Other Neurologic Conditions |
| NCT00632528 | PHASE3 | COMPLETED | MEOPA to Improve Physical Therapy Results After Multilevel Surgery |
| NCT00822029 | PHASE3 | TERMINATED | Use of Oral Bisphosphonates in the Treatment of Osteoporosis of Non-walking Children With Cerebral Palsy |
| NCT00922077 | PHASE3 | COMPLETED | Individualized Neurodevelopmental Treatment |
| NCT01249417 | PHASE3 | COMPLETED | Dysport® Pediatric Lower Limb Spasticity Study |
| NCT01251380 | PHASE3 | COMPLETED | Dysport® Pediatric Lower Limb Spasticity Follow-on Study |
| NCT01437644 | PHASE3 | COMPLETED | The Post-Operative Pain in Cerebral Palsy (POPPIES) Trial |
| NCT01492608 | PHASE3 | COMPLETED | Magnesium Sulphate for Preterm Birth (MASP Study) |
| NCT01603602 | PHASE3 | COMPLETED | BOTOX® Treatment in Pediatric Upper Limb Spasticity |
| NCT01603615 | PHASE3 | COMPLETED | BOTOX® Open-Label Treatment in Pediatric Upper Limb Spasticity |
| NCT01603628 | PHASE3 | COMPLETED | BOTOX® Treatment in Pediatric Lower Limb Spasticity |
| NCT01603641 | PHASE3 | COMPLETED | BOTOX® Open-Label Treatment in Pediatric Lower Limb Spasticity |
| NCT01633736 | PHASE3 | UNKNOWN | Targeted Hip Strength Training in Children With Cerebral Palsy (CP) |
| NCT01898520 | PHASE3 | COMPLETED | A Safety, Efficacy and Tolerability Study of Sativex for the Treatment of Spasticity in Children Aged 8 to 18 Years |
| NCT01929434 | PHASE3 | COMPLETED | Efficacy of Stem Cell Transplantation Compared to Rehabilitation Treatment of Patients With Cerebral Paralysis |
| NCT02002884 | PHASE3 | COMPLETED | Dose-response Study of Efficacy and Safety of Botulinum Toxin Type A to Treat Spasticity of the Arm(s) or of Arm(s) and Leg(s) in Cerebral Palsy |
| NCT02270736 | PHASE3 | COMPLETED | Clinical Study to Investigate the Efficacy and Safety of NT 201 Compared to Placebo in the Treatment of Chronic Troublesome Drooling Associated With Neurological Disorders and/or Intellectual Disability |
| NCT02839785 | PHASE3 | TERMINATED | Analgesia and Physiotherapy in Children With Cerebral Palsy (ANTALKINECP) |
| NCT03110341 | PHASE3 | UNKNOWN | Effect of Erythropoietin in Premature Infants on White Matter Lesions and Neurodevelopmental Outcome |
| NCT03302871 | PHASE3 | COMPLETED | Integrated Management Enhances Functional Gains in Children With Cerebral Palsy Treated by BoNT-A |
| NCT03306212 | PHASE3 | COMPLETED | Efficacy of Intermittent Serial Casting on Spastic Wrist Flexion Deformity |
Related Atlas pages
- Associated diseases: TUBB4A-related neurologic disorder, torsion dystonia 4, hypomyelinating leukodystrophy 6
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): Brown syndrome, cerebral palsy, classic medulloblastoma, congenital nervous system disorder, frontotemporal dementia, hereditary spastic paraplegia, hypomyelinating leukodystrophy 6, leukodystrophy, torsion dystonia 4, TUBB4A-related neurologic disorder