TXNDC11-AS1

Summary

TXNDC11-AS1 (TXNDC11 antisense RNA 1, HGNC:56375) is a long non-coding RNA gene on chromosome 16p13.13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:56375
Approved symbol	TXNDC11-AS1
Name	TXNDC11 antisense RNA 1
Location	16p13.13
Locus type	RNA, long non-coding
Status	Approved
Aliases	AC007613.1
Ensembl gene	ENSG00000262420
Ensembl biotype	lncRNA
Entrez	127379753
RNAcentral	URS00026A1A4C — lncRNA, 1493 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 4 — 4 lncRNA

ENST00000572811, ENST00000789294, ENST00000789295, ENST00000789296

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000572811 — 1 exons

Exon	Start	End
ENSE00002669252	11741910	11744506

Expression profiles

Bgee: expression breadth broad, 83 present calls, max score 77.23.

Top tissues by expression

209 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
buccal mucosa cell	CL:0002336	77.23	silver quality
gastrocnemius	UBERON:0001388	69.78	gold quality
muscle of leg	UBERON:0001383	69.63	gold quality
muscle organ	UBERON:0001630	65.54	gold quality
hindlimb stylopod muscle	UBERON:0004252	64.65	gold quality
bone marrow cell	CL:0002092	64.55	silver quality
ventricular zone	UBERON:0003053	59.05	silver quality
granulocyte	CL:0000094	58.27	gold quality
cortical plate	UBERON:0005343	54.17	silver quality
muscle tissue	UBERON:0002385	54.13	gold quality
skeletal muscle tissue	UBERON:0001134	54.00	gold quality
left lobe of thyroid gland	UBERON:0001120	53.52	gold quality
right lobe of thyroid gland	UBERON:0001119	53.51	gold quality
monocyte	CL:0000576	53.23	gold quality
mononuclear cell	CL:0000842	53.16	gold quality
thyroid gland	UBERON:0002046	52.81	gold quality
stromal cell of endometrium	CL:0002255	51.53	silver quality
adult mammalian kidney	UBERON:0000082	49.94	gold quality
Brodmann (1909) area 46	UBERON:0006483	49.30	gold quality
blood vessel layer	UBERON:0004797	49.29	gold quality
cervix squamous epithelium	UBERON:0006922	49.20	gold quality
hair follicle	UBERON:0002073	49.18	gold quality
smooth muscle tissue	UBERON:0001135	49.10	gold quality
cortex of kidney	UBERON:0001225	49.05	silver quality
olfactory bulb	UBERON:0002264	48.92	gold quality
choroid plexus epithelium	UBERON:0003911	48.89	gold quality
myocardium	UBERON:0002349	48.87	gold quality
type B pancreatic cell	CL:0000169	48.83	gold quality
metanephros	UBERON:0000081	48.80	silver quality
islet of Langerhans	UBERON:0000006	48.72	silver quality

Single-cell (SCXA)

Detected in 2 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-MTAB-9543	yes	24.29
E-ANND-3	no	2.58

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.