UBAC2-AS1

Summary

UBAC2-AS1 (UBAC2 antisense RNA 1, HGNC:42502) is a long non-coding RNA gene on chromosome 13q32.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:42502
Approved symbol	UBAC2-AS1
Name	UBAC2 antisense RNA 1
Location	13q32.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000228889
Ensembl biotype	lncRNA
Entrez	100289373
RNAcentral	URS000075D308 — lncRNA, 1821 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 16 — 16 lncRNA

ENST00000426037, ENST00000445737, ENST00000658188, ENST00000662755, ENST00000668596, ENST00000668873, ENST00000671580, ENST00000687067, ENST00000834285, ENST00000834286, ENST00000834287, ENST00000834288, ENST00000834289, ENST00000834290, ENST00000834291, ENST00000834292

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000426037 — 2 exons

Exon	Start	End
ENSE00004251713	99196361	99197802
ENSE00004251719	99200366	99200770

Expression profiles

Bgee: expression breadth ubiquitous, 166 present calls, max score 88.21.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 2.9686 / max 37.2231, expressed in 1342 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
137981	2.7276	1326
137980	0.2410	92

Top tissues by expression

242 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
sperm	CL:0000019	88.21	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	86.31	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.37	gold quality
left testis	UBERON:0004533	79.46	gold quality
right testis	UBERON:0004534	79.36	gold quality
testis	UBERON:0000473	77.77	gold quality
corpus epididymis	UBERON:0004359	73.28	gold quality
bone marrow cell	CL:0002092	71.67	silver quality
right lobe of liver	UBERON:0001114	69.55	gold quality
right uterine tube	UBERON:0001302	68.49	gold quality
epithelium of nasopharynx	UBERON:0001951	68.25	gold quality
hindlimb stylopod muscle	UBERON:0004252	67.83	gold quality
islet of Langerhans	UBERON:0000006	66.99	gold quality
ventricular zone	UBERON:0003053	66.77	gold quality
caput epididymis	UBERON:0004358	65.30	gold quality
granulocyte	CL:0000094	64.71	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	64.50	gold quality
gastrocnemius	UBERON:0001388	64.39	gold quality
muscle of leg	UBERON:0001383	64.24	gold quality
cauda epididymis	UBERON:0004360	64.14	silver quality
spinal cord	UBERON:0002240	63.88	gold quality
cortical plate	UBERON:0005343	63.88	gold quality
amniotic fluid	UBERON:0000173	63.54	silver quality
apex of heart	UBERON:0002098	63.53	gold quality
right atrium auricular region	UBERON:0006631	63.32	gold quality
esophagus squamous epithelium	UBERON:0006920	63.26	gold quality
cardiac atrium	UBERON:0002081	63.17	gold quality
lymph node	UBERON:0000029	62.71	gold quality
right adrenal gland	UBERON:0001233	62.62	gold quality
amygdala	UBERON:0001876	62.62	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.51

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.