UBE2E1-AS1

Summary

UBE2E1-AS1 (UBE2E1 antisense RNA 1, HGNC:40598) is a long non-coding RNA gene on chromosome 3p24.3.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40598
Approved symbol	UBE2E1-AS1
Name	UBE2E1 antisense RNA 1
Location	3p24.3
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000223791
Ensembl biotype	lncRNA
Entrez	100874092
RNAcentral	URS00000B5033 — lncRNA, 778 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000426702

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000426702 — 2 exons

Exon	Start	End
ENSE00004210407	23803695	23804714
ENSE00004210408	23806819	23806905

Expression profiles

Bgee: expression breadth ubiquitous, 114 present calls, max score 81.73.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0507 / max 9.7873, expressed in 20 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
41461	0.0507	20

Top tissues by expression

114 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	81.73	gold quality
hindlimb stylopod muscle	UBERON:0004252	65.69	gold quality
ganglionic eminence	UBERON:0004023	65.42	gold quality
skeletal muscle tissue	UBERON:0001134	63.38	gold quality
ventricular zone	UBERON:0003053	63.09	gold quality
monocyte	CL:0000576	55.26	gold quality
prefrontal cortex	UBERON:0000451	55.25	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	55.19	gold quality
substantia nigra	UBERON:0002038	54.31	gold quality
calcaneal tendon	UBERON:0003701	53.54	silver quality
amygdala	UBERON:0001876	53.29	gold quality
putamen	UBERON:0001874	52.86	gold quality
bone marrow	UBERON:0002371	52.32	silver quality
frontal cortex	UBERON:0001870	52.23	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	52.20	gold quality
lymph node	UBERON:0000029	52.01	gold quality
nucleus accumbens	UBERON:0001882	51.95	gold quality
blood	UBERON:0000178	51.72	gold quality
hypothalamus	UBERON:0001898	51.41	gold quality
cerebral cortex	UBERON:0000956	51.24	gold quality
anterior cingulate cortex	UBERON:0009835	51.20	gold quality
caudate nucleus	UBERON:0001873	51.08	gold quality
gall bladder	UBERON:0002110	50.79	gold quality
brain	UBERON:0000955	50.69	gold quality
Ammon’s horn	UBERON:0001954	50.69	gold quality
left uterine tube	UBERON:0001303	50.68	gold quality
islet of Langerhans	UBERON:0000006	50.57	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	50.40	gold quality
vermiform appendix	UBERON:0001154	50.09	gold quality
Brodmann (1909) area 9	UBERON:0013540	50.04	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.64

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.