UBOX5-AS1

Summary

UBOX5-AS1 (UBOX5 antisense RNA 1, HGNC:44111) is a long non-coding RNA gene on chromosome 20p13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:44111
Approved symbol	UBOX5-AS1
Name	UBOX5 antisense RNA 1
Location	20p13
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000235958
Ensembl biotype	lncRNA
Entrez	100134015
RNAcentral	URS000075BA4F — lncRNA, 1794 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000446537, ENST00000454019, ENST00000840179, ENST00000840180, ENST00000840181

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000446537 — 7 exons

Exon	Start	End
ENSE00001602662	3111644	3111752
ENSE00001649226	3106913	3107571
ENSE00001770755	3109475	3109750
ENSE00001774457	3150538	3150867
ENSE00001783920	3110632	3110717
ENSE00001789366	3110278	3110453
ENSE00001797713	3136003	3136158

Expression profiles

Bgee: expression breadth ubiquitous, 132 present calls, max score 83.57.

Top tissues by expression

132 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.57	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	81.06	gold quality
sural nerve	UBERON:0015488	79.50	gold quality
bone marrow	UBERON:0002371	70.48	gold quality
bone marrow cell	CL:0002092	70.27	silver quality
blood	UBERON:0000178	69.90	gold quality
apex of heart	UBERON:0002098	69.35	gold quality
ventricular zone	UBERON:0003053	69.21	gold quality
right testis	UBERON:0004534	67.24	gold quality
left testis	UBERON:0004533	67.00	gold quality
testis	UBERON:0000473	66.71	gold quality
colonic epithelium	UBERON:0000397	66.70	silver quality
monocyte	CL:0000576	65.99	gold quality
granulocyte	CL:0000094	65.15	gold quality
cortical plate	UBERON:0005343	65.13	gold quality
stromal cell of endometrium	CL:0002255	64.20	gold quality
adrenal tissue	UBERON:0018303	63.53	gold quality
spleen	UBERON:0002106	62.15	gold quality
skin of leg	UBERON:0001511	62.05	gold quality
zone of skin	UBERON:0000014	61.95	gold quality
skin of abdomen	UBERON:0001416	61.92	gold quality
skeletal muscle tissue	UBERON:0001134	61.89	gold quality
fundus of stomach	UBERON:0001160	61.41	gold quality
hindlimb stylopod muscle	UBERON:0004252	61.29	gold quality
body of pancreas	UBERON:0001150	61.25	gold quality
smooth muscle tissue	UBERON:0001135	61.08	gold quality
right hemisphere of cerebellum	UBERON:0014890	61.08	gold quality
adrenal gland	UBERON:0002369	61.03	gold quality
cerebellum	UBERON:0002037	60.98	gold quality
cerebellar cortex	UBERON:0002129	60.95	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	2.55

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.