UBQLN1-AS1

Summary

UBQLN1-AS1 (UBQLN1 antisense RNA 1, HGNC:55518) is a long non-coding RNA gene on chromosome 9q21.32.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55518
Approved symbol	UBQLN1-AS1
Name	UBQLN1 antisense RNA 1
Location	9q21.32
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000254473
Ensembl biotype	lncRNA
Entrez	105376114
RNAcentral	URS0000A76698 — lncRNA, 1129 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 9 — 9 lncRNA

ENST00000524818, ENST00000531661, ENST00000693676, ENST00000734896, ENST00000734897, ENST00000734898, ENST00000734899, ENST00000734900, ENST00000734901

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000524818 — 2 exons

Exon	Start	End
ENSE00002170257	83712498	83712869
ENSE00002185274	83707594	83707710

Expression profiles

Bgee: expression breadth ubiquitous, 132 present calls, max score 90.18.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 2.2447 / max 65.2490, expressed in 1153 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
97095	2.1295	1131
97096	0.1152	60

Top tissues by expression

132 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	90.18	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	86.60	gold quality
hindlimb stylopod muscle	UBERON:0004252	85.70	gold quality
gastrocnemius	UBERON:0001388	83.82	gold quality
muscle of leg	UBERON:0001383	83.44	gold quality
skeletal muscle tissue	UBERON:0001134	81.82	gold quality
tibial artery	UBERON:0007610	80.07	gold quality
popliteal artery	UBERON:0002250	80.02	gold quality
bone marrow cell	CL:0002092	79.59	gold quality
islet of Langerhans	UBERON:0000006	77.15	gold quality
right coronary artery	UBERON:0001625	76.21	gold quality
pancreas	UBERON:0001264	75.03	gold quality
descending thoracic aorta	UBERON:0002345	74.10	gold quality
body of pancreas	UBERON:0001150	73.87	gold quality
adult mammalian kidney	UBERON:0000082	73.65	gold quality
ascending aorta	UBERON:0001496	73.62	gold quality
thoracic aorta	UBERON:0001515	73.43	gold quality
apex of heart	UBERON:0002098	73.41	gold quality
prefrontal cortex	UBERON:0000451	73.15	gold quality
left coronary artery	UBERON:0001626	72.85	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	72.85	gold quality
right lobe of liver	UBERON:0001114	72.72	gold quality
heart left ventricle	UBERON:0002084	72.14	gold quality
heart	UBERON:0000948	71.95	gold quality
right adrenal gland	UBERON:0001233	71.90	gold quality
testis	UBERON:0000473	71.78	gold quality
kidney	UBERON:0002113	71.62	gold quality
right atrium auricular region	UBERON:0006631	71.35	gold quality
liver	UBERON:0002107	71.29	gold quality
right testis	UBERON:0004534	71.22	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.18

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.