UBXN7-AS1

Summary

UBXN7-AS1 (UBXN7 antisense RNA 1, HGNC:41227) is a long non-coding RNA gene on chromosome 3q29.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:41227
Approved symbol	UBXN7-AS1
Name	UBXN7 antisense RNA 1
Location	3q29
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000225822
Ensembl biotype	lncRNA
Entrez	100874034
RNAcentral	URS0000A76C79 — lncRNA, 908 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 1 — 1 lncRNA

ENST00000442941

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000442941 — 2 exons

Exon	Start	End
ENSE00001719751	196432202	196433034
ENSE00001780310	196431385	196431441

Expression profiles

Bgee: expression breadth ubiquitous, 157 present calls, max score 83.32.

FANTOM5 (CAGE): breadth broad, TPM avg 0.4369 / max 10.6538, expressed in 248 samples.

FANTOM5 promoters (2 alternative TSS)

Promoter ID	TPM avg	Samples expressed
40727	0.3575	204
40726	0.0794	23

Top tissues by expression

246 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.32	gold quality
pancreatic ductal cell	CL:0002079	73.54	silver quality
colonic epithelium	UBERON:0000397	72.61	silver quality
sural nerve	UBERON:0015488	70.39	gold quality
ganglionic eminence	UBERON:0004023	69.44	gold quality
ventricular zone	UBERON:0003053	69.18	gold quality
bone marrow cell	CL:0002092	68.24	silver quality
tibialis anterior	UBERON:0001385	67.39	silver quality
endothelial cell	CL:0000115	62.72	gold quality
right lobe of thyroid gland	UBERON:0001119	62.40	gold quality
hindlimb stylopod muscle	UBERON:0004252	62.33	gold quality
monocyte	CL:0000576	61.33	gold quality
corpus epididymis	UBERON:0004359	60.97	silver quality
leukocyte	CL:0000738	60.94	gold quality
thyroid gland	UBERON:0002046	60.33	gold quality
cauda epididymis	UBERON:0004360	60.33	silver quality
calcaneal tendon	UBERON:0003701	60.13	gold quality
left lobe of thyroid gland	UBERON:0001120	60.10	gold quality
seminal vesicle	UBERON:0000998	59.56	silver quality
caput epididymis	UBERON:0004358	59.28	silver quality
islet of Langerhans	UBERON:0000006	58.42	gold quality
stromal cell of endometrium	CL:0002255	58.27	gold quality
adenohypophysis	UBERON:0002196	58.15	gold quality
skin of hip	UBERON:0001554	57.76	silver quality
ileal mucosa	UBERON:0000331	57.66	silver quality
pituitary gland	UBERON:0000007	57.44	gold quality
vermiform appendix	UBERON:0001154	57.44	gold quality
smooth muscle tissue	UBERON:0001135	56.74	gold quality
popliteal artery	UBERON:0002250	56.52	gold quality
mucosa of stomach	UBERON:0001199	56.46	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	0.67

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.