UCA1-AS1

Summary

UCA1-AS1 (UCA1 antisense RNA 1, HGNC:52553) is a long non-coding RNA gene on chromosome 19p13.12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:52553
Approved symbol	UCA1-AS1
Name	UCA1 antisense RNA 1
Location	19p13.12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000267308
Ensembl biotype	lncRNA
Entrez	105372290
RNAcentral	URS0002A66FEC — lncRNA, 1940 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 49 — 49 lncRNA

ENST00000587970, ENST00000588182, ENST00000589310, ENST00000589345, ENST00000663214, ENST00000667266, ENST00000674509, ENST00000674990, ENST00000675212, ENST00000692445, ENST00000715852, ENST00000756861, ENST00000756862, ENST00000756863, ENST00000756864, ENST00000756865, ENST00000756866, ENST00000756867, ENST00000756868, ENST00000756869, ENST00000756870, ENST00000756871, ENST00000756872, ENST00000756873, ENST00000756874, ENST00000756875, ENST00000756876, ENST00000756877, ENST00000756878, ENST00000756879, ENST00000756880, ENST00000756881, ENST00000756882, ENST00000756883, ENST00000756884, ENST00000756885, ENST00000756886, ENST00000756887, ENST00000756888, ENST00000756889, ENST00000756890, ENST00000756891, ENST00000756892, ENST00000756893, ENST00000756894, ENST00000756895, ENST00000756896, ENST00000756897, ENST00000756898

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000587970 — 2 exons

Exon	Start	End
ENSE00002795065	15835636	15835853
ENSE00002884301	15835106	15835267

Expression profiles

Bgee: expression breadth ubiquitous, 120 present calls, max score 84.05.

Top tissues by expression

120 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.05	gold quality
left testis	UBERON:0004533	83.43	gold quality
testis	UBERON:0000473	82.56	gold quality
right testis	UBERON:0004534	82.54	gold quality
ganglionic eminence	UBERON:0004023	70.57	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	69.52	gold quality
gall bladder	UBERON:0002110	69.29	gold quality
endometrium	UBERON:0001295	68.72	gold quality
colonic epithelium	UBERON:0000397	68.28	silver quality
ventricular zone	UBERON:0003053	66.89	gold quality
bone marrow cell	CL:0002092	66.30	silver quality
placenta	UBERON:0001987	65.19	gold quality
sural nerve	UBERON:0015488	64.98	silver quality
cortical plate	UBERON:0005343	63.07	gold quality
muscle tissue	UBERON:0002385	62.72	gold quality
bone marrow	UBERON:0002371	60.24	gold quality
olfactory segment of nasal mucosa	UBERON:0005386	60.22	gold quality
skeletal muscle tissue	UBERON:0001134	59.50	silver quality
right lobe of liver	UBERON:0001114	57.49	gold quality
hindlimb stylopod muscle	UBERON:0004252	57.38	gold quality
blood	UBERON:0000178	57.30	gold quality
liver	UBERON:0002107	57.11	gold quality
monocyte	CL:0000576	56.40	gold quality
urinary bladder	UBERON:0001255	56.38	gold quality
calcaneal tendon	UBERON:0003701	56.29	gold quality
islet of Langerhans	UBERON:0000006	55.96	gold quality
vermiform appendix	UBERON:0001154	55.01	gold quality
lymph node	UBERON:0000029	54.68	gold quality
uterine cervix	UBERON:0000002	54.65	gold quality
duodenum	UBERON:0002114	54.50	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.16

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.