UGDH-AS1

Summary

UGDH-AS1 (UGDH antisense RNA 1, HGNC:40601) is a long non-coding RNA gene on chromosome 4p14.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40601
Approved symbol	UGDH-AS1
Name	UGDH antisense RNA 1
Location	4p14
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000249348
Ensembl biotype	lncRNA
Entrez	100885776
RNAcentral	URS000075BE1E — lncRNA, 2967 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 6 — 6 lncRNA

ENST00000504032, ENST00000685788, ENST00000718929, ENST00000718930, ENST00000718931, ENST00000718932

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000504032 — 5 exons

Exon	Start	End
ENSE00002024411	39592673	39594707
ENSE00002027199	39589587	39589719
ENSE00002027582	39587923	39588059
ENSE00002078451	39528019	39528338
ENSE00002086696	39531969	39532130

Expression profiles

Bgee: expression breadth ubiquitous, 133 present calls, max score 89.46.

FANTOM5 (CAGE): breadth ubiquitous, TPM avg 5.0805 / max 54.2742, expressed in 1627 samples.

FANTOM5 promoters (4 alternative TSS)

Promoter ID	TPM avg	Samples expressed
47382	1.6713	989
47379	1.5833	875
47381	1.3226	844
47380	0.5033	191

Top tissues by expression

133 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	89.46	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	79.04	gold quality
colonic epithelium	UBERON:0000397	75.02	gold quality
bone marrow cell	CL:0002092	74.32	gold quality
tonsil	UBERON:0002372	74.07	gold quality
stromal cell of endometrium	CL:0002255	71.35	gold quality
ventricular zone	UBERON:0003053	71.31	gold quality
skeletal muscle tissue	UBERON:0001134	70.18	gold quality
cortical plate	UBERON:0005343	69.93	gold quality
liver	UBERON:0002107	68.98	gold quality
pancreas	UBERON:0001264	68.89	gold quality
islet of Langerhans	UBERON:0000006	68.64	gold quality
uterine cervix	UBERON:0000002	68.59	gold quality
body of pancreas	UBERON:0001150	68.56	gold quality
ganglionic eminence	UBERON:0004023	68.03	gold quality
ovary	UBERON:0000992	67.76	gold quality
primary visual cortex	UBERON:0002436	67.56	gold quality
endometrium	UBERON:0001295	67.46	gold quality
right uterine tube	UBERON:0001302	67.21	gold quality
hindlimb stylopod muscle	UBERON:0004252	67.19	gold quality
kidney	UBERON:0002113	67.08	gold quality
left ovary	UBERON:0002119	66.87	gold quality
fallopian tube	UBERON:0003889	66.68	gold quality
urinary bladder	UBERON:0001255	66.49	gold quality
smooth muscle tissue	UBERON:0001135	66.45	gold quality
right ovary	UBERON:0002118	66.37	gold quality
adult mammalian kidney	UBERON:0000082	66.02	gold quality
bone marrow	UBERON:0002371	65.93	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	65.87	gold quality
thyroid gland	UBERON:0002046	65.83	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.91

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.