UGT2B17
gene geneOn this page
Summary
UGT2B17 (UDP glucuronosyltransferase family 2 member B17, HGNC:12547) is a protein-coding gene on chromosome 4q13.2, encoding UDP-glucuronosyltransferase 2B17 (O75795). UDP-glucuronosyltransferase (UGT) that catalyzes phase II biotransformation reactions in which lipophilic substrates are conjugated with glucuronic acid to increase the metabolite’s water solubility, thereby facilitating excretion into either the urine or bile.
This gene encodes a member of the uridine diphosphoglucuronosyltransferase protein family. The encoded enzyme catalyzes the transfer of glucuronic acid from uridine diphosphoglucuronic acid to a diverse array of substrates including steroid hormones and lipid-soluble drugs. This process, known as glucuronidation, is an intermediate step in the metabolism of steroids. Copy number variation in this gene is associated with susceptibility to osteoporosis.
Source: NCBI Gene 7367 — RefSeq curated summary.
At a glance
- GWAS associations: 9
- Clinical variants (ClinVar): 96 total
- Druggable target: yes
- MANE Select transcript:
NM_001077
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:12547 |
| Approved symbol | UGT2B17 |
| Name | UDP glucuronosyltransferase family 2 member B17 |
| Location | 4q13.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000197888 |
| Ensembl biotype | protein_coding |
| OMIM | 601903 |
| Entrez | 7367 |
Gene structure
Transcript identifiers
Ensembl transcripts: 4 — 4 protein_coding
ENST00000317746, ENST00000684088, ENST00000893234, ENST00000950879
RefSeq mRNA: 1 — MANE Select: NM_001077
NM_001077
CCDS: CCDS3523
Canonical transcript exons
ENST00000317746 — 7 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001364957 | 68537173 | 68537904 |
| ENSE00001420935 | 68567761 | 68568548 |
| ENSE00001597835 | 68550677 | 68550896 |
| ENSE00001618641 | 68551824 | 68551911 |
| ENSE00001670896 | 68565572 | 68565720 |
| ENSE00001711753 | 68560537 | 68560668 |
| ENSE00003916064 | 68575951 | 68576322 |
Expression profiles
Bgee: expression breadth ubiquitous, 128 present calls, max score 99.03.
FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.0152 / max 5.9502, expressed in 11 samples.
FANTOM5 promoters (2 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 52338 | 0.0077 | 8 |
| 203186 | 0.0075 | 3 |
Top tissues by expression
277 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| mucosa of transverse colon | UBERON:0004991 | 99.03 | gold quality |
| ileal mucosa | UBERON:0000331 | 98.92 | gold quality |
| mucosa of sigmoid colon | UBERON:0004993 | 95.33 | gold quality |
| duodenum | UBERON:0002114 | 92.02 | gold quality |
| vermiform appendix | UBERON:0001154 | 91.35 | gold quality |
| colonic mucosa | UBERON:0000317 | 89.80 | gold quality |
| caecum | UBERON:0001153 | 85.62 | gold quality |
| colonic epithelium | UBERON:0000397 | 85.15 | gold quality |
| jejunal mucosa | UBERON:0000399 | 84.39 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 84.34 | gold quality |
| small intestine | UBERON:0002108 | 83.55 | gold quality |
| transverse colon | UBERON:0001157 | 82.56 | gold quality |
| rectum | UBERON:0001052 | 78.58 | gold quality |
| right lobe of liver | UBERON:0001114 | 78.32 | gold quality |
| intestine | UBERON:0000160 | 75.94 | gold quality |
| liver | UBERON:0002107 | 74.87 | gold quality |
| large intestine | UBERON:0000059 | 73.50 | gold quality |
| colon | UBERON:0001155 | 72.78 | gold quality |
| epithelial cell of pancreas | CL:0000083 | 67.24 | silver quality |
| jejunum | UBERON:0002115 | 64.68 | gold quality |
| sigmoid colon | UBERON:0001159 | 58.99 | gold quality |
| bone marrow cell | CL:0002092 | 58.54 | silver quality |
| gall bladder | UBERON:0002110 | 56.97 | gold quality |
| decidua | UBERON:0002450 | 56.55 | gold quality |
| hair follicle | UBERON:0002073 | 53.04 | gold quality |
| endometrium epithelium | UBERON:0004811 | 52.62 | gold quality |
| cerebellar vermis | UBERON:0004720 | 51.12 | gold quality |
| Brodmann (1909) area 10 | UBERON:0013541 | 50.99 | gold quality |
| lower lobe of lung | UBERON:0008949 | 50.75 | silver quality |
| muscle layer of sigmoid colon | UBERON:0035805 | 50.72 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 2.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-MTAB-6678 | yes | 10.88 |
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): AR, CDX2, FOXA1, FOXA2, HNF1A, NCOR1, NCOR2, PBX2, PKNOX1, PRKDC
miRNA regulators (miRDB)
48 targeting UGT2B17, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-126-5P | 100.00 | 72.71 | 3180 |
| HSA-MIR-4795-3P | 100.00 | 74.62 | 4024 |
| HSA-MIR-656-3P | 100.00 | 72.15 | 2788 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-548AW | 99.99 | 72.57 | 3559 |
| HSA-MIR-10401-5P | 99.99 | 65.79 | 948 |
| HSA-MIR-1468-3P | 99.96 | 72.74 | 3797 |
| HSA-MIR-335-3P | 99.93 | 73.36 | 4958 |
| HSA-MIR-450B-5P | 99.92 | 71.48 | 3175 |
| HSA-MIR-3671 | 99.90 | 73.04 | 3897 |
| HSA-MIR-6783-3P | 99.89 | 67.92 | 2059 |
| HSA-MIR-1343-3P | 99.89 | 66.78 | 1815 |
| HSA-MIR-182-5P | 99.87 | 74.03 | 2589 |
| HSA-MIR-5010-3P | 99.83 | 70.60 | 2357 |
| HSA-MIR-944 | 99.82 | 70.85 | 3042 |
| HSA-MIR-494-3P | 99.70 | 71.45 | 2795 |
| HSA-MIR-33A-3P | 99.70 | 70.27 | 3362 |
| HSA-MIR-548AV-5P | 99.60 | 70.84 | 2107 |
| HSA-MIR-548K | 99.60 | 70.84 | 2107 |
| HSA-MIR-2053 | 99.57 | 69.15 | 1635 |
| HSA-MIR-5004-3P | 99.54 | 68.27 | 1371 |
| HSA-MIR-409-3P | 99.50 | 66.33 | 1192 |
| HSA-MIR-8054 | 99.48 | 70.81 | 2084 |
| HSA-MIR-569 | 99.42 | 66.32 | 1009 |
| HSA-MIR-513A-3P | 99.39 | 70.63 | 3620 |
| HSA-MIR-513C-3P | 99.39 | 70.63 | 3620 |
| HSA-MIR-4786-3P | 99.36 | 68.35 | 1390 |
| HSA-MIR-6128 | 99.33 | 67.83 | 1581 |
| HSA-MIR-329-5P | 99.27 | 68.11 | 1597 |
| HSA-MIR-3606-3P | 99.11 | 69.84 | 3254 |
Literature-anchored findings (GeneRIF, showing 40)
- In human prostate, UGT2B15 and UGT2B17 genes have complementary roles and are expressed in cells where their specific substrates are synthesized. (PMID:15666817)
- UGT2B17 deletion polymorphism is associated with a reduced rate of NNAL detoxification in vivo and may increase individual susceptibility to tobacco-related cancers. (PMID:16220109)
- The UGT2B17 polymorphism is strongly associated with the bimodal distribution of testosterone excretion and also with the large difference in testosterone excretion between Koreans and Swedes. (PMID:16332934)
- Deletion polymorphism of UDP-glucuronosyltransferase 2B17 is associated with prostate cancer (PMID:16896035)
- The UGT2B17 deletion polymorphism is associated with prostate cancer risk. (PMID:17387331)
- association of the UGT2B17 deletion with increased lung adenocarcinoma in women is consistent with its association with decreased 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanol glucuronidation rates in women (PMID:17416778)
- results suggest that the HSD3B1 N367T and UGT2B17 null polymorphisms may modify the risk of prostate cancer, particularly among men with a family history of the disease (PMID:17826523)
- UGT2B15 and -B17 are critical enzymes for the local inactivation of androgens and that glucuronidation is a major determinant of androgen action in prostate cells (PMID:17848572)
- These findings show that the UGT2B17 deletion polymorphism is not associated with prostate cancer risk in Caucasians. (PMID:17935910)
- Androsterone reduces the glucuronidation of androgens catalysed by UGT2B15 and UGT2B17 in a prostate tumor cell line. (PMID:17988216)
- The UGT2B17 deletion polymorphism does not play a major role in prostate cancer susceptibility as previously indicated. (PMID:18247404)
- Vitamin D receptor activator calcitriol as a negative regulator of the UGT2B15- and UGT2B17-dependent inactivation of androgens in prostate cancer LNCaP cells. (PMID:18281521)
- UGT2B17 ia a primary androgen-regulated genes and androgen receptor is required for basal expression and androgen-regulated expression. (PMID:18302198)
- Diversity was unusually high, with evidence of balancing selection in Europe. In contrast, diversity was low in East Asia where a single haplotype predominated, suggesting positive selection for the deletion in this part of the world (PMID:18760392)
- Genome-wide copy-number variation identified a susceptibility gene, UGT2B17, for osteoporosis. (PMID:18992858)
- In pubertal boys, a common homozygous deletion in the UGT2B17 gene strongly affected urinary excretion pattern of androgen metabolites but did not influence circulating androgen levels. (PMID:19088161)
- Large testosterone excretion is associated with a deletion polymorphism of the UGT2B17 gene. This polymorphism decreases T/E ratio level. (PMID:19224506)
- Copy-number variations (CNVs) of the human sex steroid metabolizing genes UGT2B17 (PMID:19572376)
- the association of deletion polymorphism in the UGT2B17 gene with the occurrence of renal disorders on chronic exposure to anabolic androgenic steroids (PMID:20429943)
- Overexpression of UGT2B17 is associated with endometrial cancer. (PMID:20554747)
- UGT2B17 expression in prostate cancer is regulated by a novel polymorphism in forkhead boxA1 binding site. (PMID:20628005)
- regulation of the UGT2B15 and UGT2B17 genes by FOXA1 may have an important role in the maintenance of androgen homeostasis within prostate cancer cells. (PMID:20736324)
- data suggest that men have a higher amount of UGT2B17 glucuronidation activity then women (PMID:20810538)
- Data suggest that UGTs 2B10 and 2B17 play important roles in the glucuronidation of nicotine and suggest that the UGT2B10 codon 67 SNP and the UGT2B17 gene deletion reduce overall glucuronidation rates of nicotine and its major metabolites in smokers. (PMID:20876810)
- we found no evidence of an effect of UGT2B17 CNV on osteoporosis risk in elderly Caucasian women. (PMID:20878390)
- Data show that steroidogenic enzymes (AKR1C3, HSD17B2, UGT2B15 and UGT2B17) and stem/progenitor cell markers CK5 and ABCG2 were upregulated in castration resistant prostate cancer. (PMID:21365123)
- UGT2B17 gene deletion associated with an increase in bone mineral density similar to the effect of hormone replacement in postmenopausal women (PMID:21614655)
- Data show that 698 CNPs loci overlap with known disease-associated or pharmacogenetic-related genes such as CFHR3, CFHR1, GSTTI and UGT2B17. (PMID:21677662)
- The UGT2B17 Del polymorphism may significantly contribute to prostate cancer susceptibility in men. (Meta-analysis) (PMID:21919858)
- The study revealed that UGT2B15 and UGT2B17 are differentially regulated during prostate cancer progression. (PMID:22170718)
- UGT2B17 and UGT2B10 play key roles in the glucuronidation of 3HC in the human liver and that functional polymorphisms in UGT2B17 and UGT2B10 are associated with significantly reduced glucuronidation activities against 3HC. (PMID:22228205)
- Genetic variations in the UGT2B17 gene dramatically affect the pharmacokinetics of MK-7246 in healthy subjects. (PMID:22669291)
- We observed a significant association between UGT2B17 expressing recipients and UGT2B17 deficient donors with the severity of Acute graft versus host disease. (PMID:22726315)
- The prevalence of the UGT2B17 deletion genotype is extremely high in Japanese subjects. (PMID:22887913)
- Data from an in vitro supersome/microsome-based assay suggest that the key steroid-metabolizing enzyme UGT2B17 is inhibited by phenolic dietary substances in red wine and therefore may reduce the rate of testosterone glucuronidation in vivo. (PMID:22958586)
- The present study was aimed to investigate the possible association between 19-base pair (bp) deletion polymorphism of the DHFR gene (rs70991108), null genotype of UGT2B17 as well as the expression level of NGX6 with the risk of breast cancer. (PMID:23053953)
- observed an exclusive involvement of the 2B17 isoform within the UGT protein family in poor-risk chronic lymphocytic leukemia (PMID:23169782)
- Report UGT2B17 expression in fetal/adult tissues. (PMID:23223495)
- The androgen receptor assay may serve as a complement to the urinary testosterone/epitestosterone (T/E) doping test, because this is profoundly influenced by the UGT2B17 deletion polymorphism. (PMID:23294483)
- Structural variants unique to the malignant cell line inactivated: UGT2B17, a gene that inactivates dihydrotestosterone, a known activator of prostate cancer progression. (PMID:23792589)
Cross-species orthologs
107 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | ugt5d1 | ENSDARG00000002394 |
| danio_rerio | ugt5c2 | ENSDARG00000006372 |
| danio_rerio | ugt5a1 | ENSDARG00000016479 |
| danio_rerio | ugt5g1 | ENSDARG00000032862 |
| danio_rerio | ugt5g2 | ENSDARG00000043901 |
| danio_rerio | ugt5f1 | ENSDARG00000054835 |
| danio_rerio | ugt5e1 | ENSDARG00000058048 |
| danio_rerio | ugt5c3 | ENSDARG00000061439 |
| danio_rerio | ugt5c1 | ENSDARG00000061444 |
| danio_rerio | si:ch73-334d15.1 | ENSDARG00000061672 |
| danio_rerio | ugt2a7 | ENSDARG00000091624 |
| danio_rerio | ugt5b4 | ENSDARG00000091916 |
| danio_rerio | ugt2b1 | ENSDARG00000093043 |
| danio_rerio | ugt5a2 | ENSDARG00000093640 |
| danio_rerio | ugt5b3 | ENSDARG00000099276 |
| danio_rerio | ugt5b2 | ENSDARG00000101495 |
| danio_rerio | ugt5b5 | ENSDARG00000104203 |
| danio_rerio | ugt5b1 | ENSDARG00000104995 |
| danio_rerio | ugt2b3 | ENSDARG00000109611 |
| danio_rerio | ENSDARG00000110614 | |
| danio_rerio | ENSDARG00000113218 | |
| danio_rerio | ugt2b5 | ENSDARG00000116986 |
| drosophila_melanogaster | Ugt36A1 | FBGN0015663 |
| drosophila_melanogaster | Ugt35B1 | FBGN0026314 |
| drosophila_melanogaster | Ugt35A1 | FBGN0026315 |
| drosophila_melanogaster | Ugt37C1 | FBGN0026754 |
| drosophila_melanogaster | Ugt37B1 | FBGN0026755 |
| drosophila_melanogaster | Ugt37A1 | FBGN0026756 |
| drosophila_melanogaster | Ugt36E1 | FBGN0027070 |
| drosophila_melanogaster | Ugt49B1 | FBGN0027073 |
| drosophila_melanogaster | Ugt36F1 | FBGN0027074 |
| drosophila_melanogaster | Ugt307A1 | FBGN0031887 |
| drosophila_melanogaster | Ugt36D1 | FBGN0032713 |
| drosophila_melanogaster | Ugt49C1 | FBGN0034605 |
| drosophila_melanogaster | Ugt316A1 | FBGN0036842 |
| drosophila_melanogaster | Ugt37A2 | FBGN0038082 |
| drosophila_melanogaster | Ugt37A3 | FBGN0038083 |
| drosophila_melanogaster | Ugt49B2 | FBGN0038886 |
| drosophila_melanogaster | Ugt303B3 | FBGN0039085 |
| drosophila_melanogaster | Ugt303B1 | FBGN0039086 |
| drosophila_melanogaster | Ugt303B2 | FBGN0039087 |
| drosophila_melanogaster | Ugt304A1 | FBGN0040250 |
| drosophila_melanogaster | Ugt302K1 | FBGN0040251 |
| drosophila_melanogaster | Ugt303A1 | FBGN0040252 |
| drosophila_melanogaster | Ugt35E1 | FBGN0040253 |
| drosophila_melanogaster | Ugt35E2 | FBGN0040255 |
| drosophila_melanogaster | Ugt302E1 | FBGN0040257 |
| drosophila_melanogaster | Ugt302C1 | FBGN0040259 |
| drosophila_melanogaster | Ugt37D1 | FBGN0040260 |
| drosophila_melanogaster | Ugt37E1 | FBGN0040261 |
| drosophila_melanogaster | Ugt37C2 | FBGN0040262 |
| drosophila_melanogaster | Ugt305A1 | FBGN0042179 |
| drosophila_melanogaster | Ugt35D1 | FBGN0051002 |
| caenorhabditis_elegans | WBGENE00007072 | |
| caenorhabditis_elegans | WBGENE00007073 | |
| caenorhabditis_elegans | WBGENE00007402 | |
| caenorhabditis_elegans | WBGENE00007422 | |
| caenorhabditis_elegans | WBGENE00007455 | |
| caenorhabditis_elegans | WBGENE00007885 | |
| caenorhabditis_elegans | WBGENE00007946 | |
| caenorhabditis_elegans | WBGENE00008097 | |
| caenorhabditis_elegans | WBGENE00008486 | |
| caenorhabditis_elegans | WBGENE00009255 | |
| caenorhabditis_elegans | WBGENE00010904 | |
| caenorhabditis_elegans | WBGENE00011006 | |
| caenorhabditis_elegans | WBGENE00011340 | |
| caenorhabditis_elegans | WBGENE00011452 | |
| caenorhabditis_elegans | WBGENE00011453 | |
| caenorhabditis_elegans | WBGENE00012788 | |
| caenorhabditis_elegans | WBGENE00013900 | |
| caenorhabditis_elegans | WBGENE00013905 | |
| caenorhabditis_elegans | WBGENE00013906 | |
| caenorhabditis_elegans | WBGENE00015141 | |
| caenorhabditis_elegans | WBGENE00015369 | |
| caenorhabditis_elegans | WBGENE00015371 | |
| caenorhabditis_elegans | WBGENE00015449 | |
| caenorhabditis_elegans | WBGENE00015577 | |
| caenorhabditis_elegans | ugt-28 | WBGENE00015693 |
| caenorhabditis_elegans | ugt-27 | WBGENE00015694 |
| caenorhabditis_elegans | ugt-26 | WBGENE00015695 |
| caenorhabditis_elegans | WBGENE00015739 | |
| caenorhabditis_elegans | WBGENE00015965 | |
| caenorhabditis_elegans | WBGENE00016013 | |
| caenorhabditis_elegans | WBGENE00017315 | |
| caenorhabditis_elegans | WBGENE00017329 | |
| caenorhabditis_elegans | WBGENE00017331 | |
| caenorhabditis_elegans | WBGENE00017332 | |
| caenorhabditis_elegans | WBGENE00017333 | |
| caenorhabditis_elegans | WBGENE00017334 | |
| caenorhabditis_elegans | WBGENE00017336 | |
| caenorhabditis_elegans | WBGENE00017959 | |
| caenorhabditis_elegans | WBGENE00018206 | |
| caenorhabditis_elegans | WBGENE00018543 | |
| caenorhabditis_elegans | WBGENE00018931 | |
| caenorhabditis_elegans | WBGENE00019232 | |
| caenorhabditis_elegans | WBGENE00019233 | |
| caenorhabditis_elegans | WBGENE00019234 | |
| caenorhabditis_elegans | WBGENE00019235 | |
| caenorhabditis_elegans | WBGENE00019515 | |
| caenorhabditis_elegans | WBGENE00019516 | |
| caenorhabditis_elegans | WBGENE00020587 | |
| caenorhabditis_elegans | WBGENE00020592 | |
| caenorhabditis_elegans | WBGENE00020593 | |
| caenorhabditis_elegans | WBGENE00020594 | |
| caenorhabditis_elegans | WBGENE00021709 | |
| caenorhabditis_elegans | WBGENE00044282 | |
| caenorhabditis_elegans | WBGENE00044286 |
Paralogs (21): UGT2B10 (ENSG00000109181), UGT2A3 (ENSG00000135220), UGT2B28 (ENSG00000135226), UGT3A1 (ENSG00000145626), UGT2B4 (ENSG00000156096), UGT1A6 (ENSG00000167165), UGT3A2 (ENSG00000168671), UGT2B7 (ENSG00000171234), UGT2A1 (ENSG00000173610), UGT8 (ENSG00000174607), UGT2B15 (ENSG00000196620), UGT2B11 (ENSG00000213759), UGT1A9 (ENSG00000241119), UGT1A1 (ENSG00000241635), UGT1A8 (ENSG00000242366), UGT1A10 (ENSG00000242515), UGT1A7 (ENSG00000244122), UGT1A4 (ENSG00000244474), UGT2A2 (ENSG00000271271), UGT1A3 (ENSG00000288702), UGT1A5 (ENSG00000288705)
Protein
Protein identifiers
UDP-glucuronosyltransferase 2B17 — O75795 (reviewed: O75795)
Alternative names: C19-steroid-specific UDP-glucuronosyltransferase
All UniProt accessions (2): A0A804HJ67, O75795
UniProt curated annotations — full annotation on UniProt →
Function. UDP-glucuronosyltransferase (UGT) that catalyzes phase II biotransformation reactions in which lipophilic substrates are conjugated with glucuronic acid to increase the metabolite’s water solubility, thereby facilitating excretion into either the urine or bile. Catalyzes the glucuronidation of endogenous steroid hormones such as androgens (epitestosterone, androsterone) and estrogens (estradiol, epiestradiol).
Subcellular location. Endoplasmic reticulum membrane.
Tissue specificity. Expressed in various tissues including the liver, kidney, testis, uterus, placenta, mammary gland, adrenal gland, skin and prostate.
Polymorphism. Copy-number variation of UGT2B17 defines the bone mineral density quantitative trait locus 12 (BMND12) [MIM:612560]. Variance in bone mineral density is a susceptibility factor for osteoporotic fractures.
Similarity. Belongs to the UDP-glycosyltransferase family.
RefSeq proteins (1): NP_001068* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR002213 | UDP_glucos_trans | Family |
| IPR035595 | UDP_glycos_trans_CS | Conserved_site |
| IPR050271 | UDP-glycosyltransferase | Family |
Pfam: PF00201
Enzyme classification (BRENDA):
- EC 2.4.1.17 — glucuronosyltransferase (BRENDA: 32 organisms, 1285 substrates, 660 inhibitors, 855 Km, 6 kcat entries)
Substrate kinetics (BRENDA)
189 substrates with measured Km, best-characterized 15. Km ranges are aggregated across organisms/conditions.
| Substrate | Km (mM) | Measurements |
|---|---|---|
| 4-METHYLUMBELLIFERONE | 0.0001–4.204 | 44 |
| MORPHINE | 0.0355–37.4 | 31 |
| 4-NITROPHENOL | 0.0102–2 | 24 |
| PROPOFOL | 0.0072–0.9 | 19 |
| ZIDOVUDINE | 0.508–1.54 | 19 |
| 1-NAPHTHOL | 0.0025–27 | 18 |
| IMIPRAMINE | 0.0072–1.442 | 13 |
| TRANS-4-HYDROXYTAMOXIFEN | 0.0037–0.319 | 13 |
| SCOPOLETIN | 0.061–7.64 | 11 |
| SEROTONIN | 3.7–55.9 | 11 |
| 2-HYDROXYESTRONE | 0.0102–6 | 10 |
| CIS-4-HYDROXYTAMOXIFEN | 0.0074–0.193 | 10 |
| DOPAMINE | 1.89–3.11 | 10 |
| 1-HYDROXYBENZO(A)PYRENE | 0.0113–2.869 | 9 |
| 1-HYDROXYPYRENE | 0.0032–2.326 | 9 |
Catalyzed reactions (Rhea), 6 shown:
- glucuronate acceptor + UDP-alpha-D-glucuronate = acceptor beta-D-glucuronoside + UDP + H(+) (RHEA:21032)
- testosterone + UDP-alpha-D-glucuronate = testosterone 17-O-(beta-D-glucuronate) + UDP + H(+) (RHEA:52456)
- 17beta-estradiol + UDP-alpha-D-glucuronate = 17beta-estradiol 17-O-(beta-D-glucuronate) + UDP + H(+) (RHEA:52464)
- 17alpha-estradiol + UDP-alpha-D-glucuronate = 17alpha-estradiol 3-O-(beta-D-glucuronate) + UDP + H(+) (RHEA:52868)
- 17alpha-estradiol + UDP-alpha-D-glucuronate = 17alpha-estradiol 17-O-(beta-D-glucuronate) + UDP + H(+) (RHEA:52872)
- 17beta-hydroxy-5alpha-androstan-3-one + UDP-alpha-D-glucuronate = 5alpha-dihydrotestosterone 17-O-(beta-D-glucuronate) + UDP + H(+) (RHEA:53000)
UniProt features (23 total): helix 9, strand 7, glycosylation site 3, signal peptide 1, chain 1, transmembrane region 1, modified residue 1
Structure
Experimental structures (PDB)
1 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 7YAN | X-RAY DIFFRACTION | 2.5 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-O75795-F1 | 93.51 | 0.86 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (1): 136
Glycosylation sites (3): 65, 316, 483
Function
Pathways and Gene Ontology
Reactome pathways
3 pathways
| ID | Pathway |
|---|---|
| R-HSA-156588 | Glucuronidation |
| R-HSA-9749641 | Aspirin ADME |
| R-HSA-9757110 | Prednisone ADME |
MSigDB gene sets: 92 (showing top):
REACTOME_BIOLOGICAL_OXIDATIONS, GOBP_REGULATION_OF_HORMONE_LEVELS, chr4q13, GOBP_LIPID_METABOLIC_PROCESS, KEGG_STARCH_AND_SUCROSE_METABOLISM, SPIELMAN_LYMPHOBLAST_EUROPEAN_VS_ASIAN_UP, SABATES_COLORECTAL_ADENOMA_DN, KEGG_STEROID_HORMONE_BIOSYNTHESIS, VECCHI_GASTRIC_CANCER_EARLY_DN, GOBP_ESTROGEN_METABOLIC_PROCESS, GOBP_STEROID_METABOLIC_PROCESS, KEGG_METABOLISM_OF_XENOBIOTICS_BY_CYTOCHROME_P450, GOCC_NUCLEAR_OUTER_MEMBRANE_ENDOPLASMIC_RETICULUM_MEMBRANE_NETWORK, KEGG_DRUG_METABOLISM_OTHER_ENZYMES, REACTOME_GLUCURONIDATION
GO Biological Process (4): xenobiotic metabolic process (GO:0006805), steroid metabolic process (GO:0008202), estrogen metabolic process (GO:0008210), lipid metabolic process (GO:0006629)
GO Molecular Function (4): glucuronosyltransferase activity (GO:0015020), UDP-glycosyltransferase activity (GO:0008194), transferase activity (GO:0016740), glycosyltransferase activity (GO:0016757)
GO Cellular Component (3): endoplasmic reticulum membrane (GO:0005789), membrane (GO:0016020), endoplasmic reticulum (GO:0005783)
Reactome top-level categories
Rollup of top-2 pathways:
| Category | Pathways |
|---|---|
| Drug ADME | 2 |
| Phase II - Conjugation of compounds | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| metabolic process | 1 |
| cellular response to xenobiotic stimulus | 1 |
| lipid metabolic process | 1 |
| steroid metabolic process | 1 |
| hormone metabolic process | 1 |
| primary metabolic process | 1 |
| UDP-glycosyltransferase activity | 1 |
| hexosyltransferase activity | 1 |
| glycosyltransferase activity | 1 |
| catalytic activity | 1 |
| transferase activity | 1 |
| organelle membrane | 1 |
| nuclear outer membrane-endoplasmic reticulum membrane network | 1 |
| endoplasmic reticulum subcompartment | 1 |
| cellular anatomical structure | 1 |
| cytoplasm | 1 |
| endomembrane system | 1 |
| intracellular membrane-bounded organelle | 1 |
Protein interactions and networks
STRING
854 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| UGT2B17 | SLC35A2 | P78381 | 932 |
| UGT2B17 | GPRIN2 | O60269 | 831 |
| UGT2B17 | NBPF1 | Q3BBV0 | 830 |
| UGT2B17 | B3GAT2 | Q9NPZ5 | 827 |
| UGT2B17 | NPEPPS | P55786 | 827 |
| UGT2B17 | HYDIN | Q4G0P3 | 827 |
| UGT2B17 | SRGAP2 | O75044 | 823 |
| UGT2B17 | DRD5 | P21918 | 810 |
| UGT2B17 | SRGAP3 | O43295 | 810 |
| UGT2B17 | GTF2I | P78347 | 763 |
| UGT2B17 | PPIG | Q13427 | 728 |
| UGT2B17 | CYP3A4 | P05184 | 726 |
| UGT2B17 | CYP2C9 | P11712 | 632 |
| UGT2B17 | CYP1A2 | P05177 | 629 |
| UGT2B17 | CYP2C19 | P33259 | 629 |
IntAct
0 interactions, top by confidence:
BioGRID (2): UGT2B17 (Affinity Capture-MS), UGT2B17 (Proximity Label-MS)
ESM2 similar proteins: A5D6U8, A6H730, J3SDX8, O16956, O35409, O61866, O75795, P04068, P04634, P07098, P07099, P07687, P08430, P0DTE5, P11515, P19224, P21529, P36510, P37891, P38571, P49614, P70627, P70691, P79381, P80035, Q28611, Q29458, Q38924, Q3U4B4, Q3YBN2, Q41005, Q4R4S5, Q5VXI9, Q5VXJ0, Q5VYY2, Q5W064, Q64194, Q64435, Q64550, Q67ZU1
Diamond homologs: A0A096SRM5, A0A0B6VIJ5, A0A0D1CFF0, A0A0M4KE44, A0A193AU77, A0A1L7U2E9, A0A224AKZ9, A0A224AM54, A0A291PQF1, A0A291PQG3, A0A291PQH4, A0A2Z5CV93, A5U6W6, B4G072, C3W7B0, G2WW48, K7NBW3, O02663, O19103, O23401, O31853, O60656, O75310, O75795, O77649, O82385, O97951, P06133, P08430, P08541, P08542, P09875, P0DTE4, P0DTE5, P16662, P17717, P19224, P19488, P20720, P22309
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
96 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 57 |
| Likely benign | 14 |
| Benign | 20 |
Top pathogenic / likely-pathogenic (0)
SpliceAI
621 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 4:68537900:TATAG:T | acceptor_gain | 1.0000 |
| 4:68537901:ATAG:A | acceptor_gain | 1.0000 |
| 4:68537902:TAG:T | acceptor_gain | 1.0000 |
| 4:68537903:AG:A | acceptor_gain | 1.0000 |
| 4:68537903:AGC:A | acceptor_loss | 1.0000 |
| 4:68537904:GC:G | acceptor_loss | 1.0000 |
| 4:68537905:C:CC | acceptor_gain | 1.0000 |
| 4:68537905:CTG:C | acceptor_loss | 1.0000 |
| 4:68537912:A:C | acceptor_gain | 1.0000 |
| 4:68550675:A:AC | donor_gain | 1.0000 |
| 4:68550676:C:CC | donor_gain | 1.0000 |
| 4:68550724:TG:T | donor_gain | 1.0000 |
| 4:68537903:AGCTG:A | acceptor_gain | 0.9900 |
| 4:68537905:CTGAA:C | acceptor_loss | 0.9900 |
| 4:68537912:A:AC | acceptor_gain | 0.9900 |
| 4:68537916:A:C | acceptor_gain | 0.9900 |
| 4:68537918:A:C | acceptor_gain | 0.9900 |
| 4:68550676:CATA:C | donor_gain | 0.9900 |
| 4:68550676:CATAG:C | donor_gain | 0.9900 |
| 4:68550695:G:T | donor_gain | 0.9900 |
| 4:68550696:A:AC | donor_gain | 0.9900 |
| 4:68550697:C:CC | donor_gain | 0.9900 |
| 4:68565567:TTCAC:T | donor_loss | 0.9900 |
| 4:68565568:TCA:T | donor_loss | 0.9900 |
| 4:68565569:CA:C | donor_loss | 0.9900 |
| 4:68565570:A:AT | donor_loss | 0.9900 |
| 4:68565571:CCTT:C | donor_loss | 0.9900 |
| 4:68565571:CCTTA:C | donor_loss | 0.9900 |
| 4:68565717:CTTC:C | acceptor_gain | 0.9900 |
| 4:68565718:TTC:T | acceptor_gain | 0.9900 |
AlphaMissense
3531 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 4:68551905:A:G | W338R | 0.993 |
| 4:68551905:A:T | W338R | 0.993 |
| 4:68550840:C:G | A384P | 0.992 |
| 4:68567969:A:C | S172R | 0.991 |
| 4:68567969:A:T | S172R | 0.991 |
| 4:68567971:T:G | S172R | 0.991 |
| 4:68550874:A:C | F372L | 0.989 |
| 4:68550874:A:T | F372L | 0.989 |
| 4:68550876:A:G | F372L | 0.989 |
| 4:68565676:A:G | W257R | 0.989 |
| 4:68565676:A:T | W257R | 0.989 |
| 4:68537817:A:C | F467L | 0.986 |
| 4:68537817:A:T | F467L | 0.986 |
| 4:68537819:A:G | F467L | 0.986 |
| 4:68550872:A:T | I373K | 0.986 |
| 4:68551829:A:G | L363P | 0.986 |
| 4:68551837:C:A | Q360H | 0.984 |
| 4:68551837:C:G | Q360H | 0.984 |
| 4:68568348:A:G | L46P | 0.984 |
| 4:68537809:C:G | R470P | 0.983 |
| 4:68550842:T:A | E383V | 0.983 |
| 4:68551848:A:G | W357R | 0.983 |
| 4:68551848:A:T | W357R | 0.983 |
| 4:68550875:A:G | F372S | 0.982 |
| 4:68551846:C:A | W357C | 0.982 |
| 4:68551846:C:G | W357C | 0.982 |
| 4:68560625:A:T | V306E | 0.982 |
| 4:68551910:A:T | V336D | 0.981 |
| 4:68568379:A:G | W36R | 0.981 |
| 4:68568379:A:T | W36R | 0.981 |
dbSNP variants (sampled 300 via entrez): RS10000724 (4:68547156 A>C,G,T), RS1000165226 (4:68570267 T>C), RS1000224662 (4:68571383 T>C), RS1000378999 (4:68543149 G>A), RS10004842 (4:68545413 G>A), RS10005524 (4:68540146 G>A), RS1000556570 (4:68577275 C>T), RS1000710023 (4:68551372 G>A,T), RS1000759371 (4:68552727 CAAAT>C), RS1000834502 (4:68544757 A>G,T), RS1001380816 (4:68576042 C>A), RS10015614 (4:68556844 T>A,C), RS10022369 (4:68561802 G>A,C), RS1002378148 (4:68558975 G>A), RS1002431883 (4:68560256 A>G)
Disease associations
OMIM: gene MIM:601903 | disease phenotypes:
GenCC curated gene-disease
Mondo (0):
Orphanet (0):
HPO phenotypes
0 total (0 of 0 shown, HPO-id order):
GWAS associations
9 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST010173_167 | Triglyceride levels | 4.000000e-08 |
| GCST010244_276 | Triglyceride levels | 4.000000e-16 |
| GCST012020_278 | Serum metabolite levels | 1.000000e-28 |
| GCST012020_279 | Serum metabolite levels | 2.000000e-13 |
| GCST012020_280 | Serum metabolite levels | 1.000000e-41 |
| GCST012020_281 | Serum metabolite levels | 8.000000e-31 |
| GCST012020_282 | Serum metabolite levels | 2.000000e-13 |
| GCST012020_283 | Serum metabolite levels | 2.000000e-12 |
| GCST012020_284 | Serum metabolite levels | 1.000000e-10 |
EFO canonical traits (1, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004530 | triglyceride measurement |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (2): CHEMBL4523985 (PROTEIN FAMILY), CHEMBL4978 (SINGLE PROTEIN)
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB variants
1 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs6817882 | UGT2B17 | 0.00 | 0 |
Binding affinities (BindingDB)
1 measured of 1 human assays (1 total across all organisms); most potent 1 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value |
|---|---|---|
| (1R)-phenyl-[(1R,2S,7S,8S,9S)-3,3,7-trimethyltricyclo[5.4.0.02,9]undec-8-yl]methanol | KI | 21800 nM |
CTD chemical–gene interactions
50 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Hymecromone | increases glucuronidation, increases chemical synthesis, increases metabolic processing, increases activity, decreases reaction | 3 |
| Testosterone | decreases expression, increases expression, increases metabolic processing, affects cotreatment | 3 |
| 4-(methylnitrosamino)-1-(3-pyridyl)-1-butan-1-ol | increases glucuronidation, decreases glucuronidation | 2 |
| bisphenol AF | decreases activity, increases glucuronidation | 2 |
| Diclofenac | increases glucuronidation | 2 |
| Tetrachlorodibenzodioxin | affects cotreatment, decreases expression | 2 |
| Aflatoxin B1 | decreases methylation, increases expression | 2 |
| tucatinib | decreases activity | 1 |
| daidzein | increases expression | 1 |
| methyleugenol | decreases expression | 1 |
| amentoflavone | decreases activity | 1 |
| 4-(N-methyl-N-nitrosamino)-1-(3-pyridyl)-1-butanone | increases glucuronidation | 1 |
| sodium arsenite | increases expression | 1 |
| 4-methylumbelliferyl glucuronide | increases chemical synthesis, increases glucuronidation | 1 |
| caffeic acid | decreases activity | 1 |
| bicalutamide | decreases expression | 1 |
| licochalcone A | decreases reaction, increases activity | 1 |
| cylindrospermopsin | decreases expression | 1 |
| 4-((methylnitrosoamino)-1-(3-pyridyl)but-1-yl)beta-omega-glucosiduronic acid | increases chemical synthesis | 1 |
| p-coumaric acid | decreases activity | 1 |
| lorcaserin | increases carbamoylation, increases glucuronidation | 1 |
| pectolinarigenin | increases glucuronidation | 1 |
| EPZ004777 | decreases reaction, increases expression, affects binding | 1 |
| Vorinostat | affects binding, decreases activity, decreases glucuronidation, decreases reaction, increases glucuronidation | 1 |
| Androsterone | increases metabolic processing | 1 |
| Benzo(a)pyrene | decreases expression | 1 |
| Calcitriol | decreases expression, affects cotreatment | 1 |
| Chlorogenic Acid | decreases activity | 1 |
| Endosulfan | affects cotreatment, decreases expression | 1 |
| Estradiol | affects cotreatment, decreases expression, increases expression | 1 |
ChEMBL screening assays
76 unique, capped per target: 71 admet, 3 binding, 2 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL4339708 | ADMET | Drug metabolism in human hepatocytes assessed as UGT-mediated glucuronidation by measuring O-glucuronide formation at 10 uM measured after 4 hrs by LC-MS analysis | Discovery of Imidazo[1,2-a]pyrazines and Pyrazolo[1,5-c]pyrimidines as TARP γ-8 Selective AMPAR Negative Modulators. — ACS Med Chem Lett |
| CHEMBL867716 | Binding | Inhibition of UGT2B17 | Stereochemical sensitivity of the human UDP-glucuronosyltransferases 2B7 and 2B17. — J Med Chem |
| CHEMBL869550 | Functional | Competitive inhibition of UGT2B17-catalyzed scopoletin glucuronidation | Stereochemical sensitivity of the human UDP-glucuronosyltransferases 2B7 and 2B17. — J Med Chem |
Clinical trials (associated diseases)
0 trials via MONDO — disease-level, not drug-specific.
Related Atlas pages
No linked Atlas pages yet — the cross-entity mesh grows as the corpus expands.