UMOD
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Summary
UMOD (uromodulin, HGNC:12559) is a protein-coding gene on chromosome 16p12.3, encoding Uromodulin (P07911). Functions in biogenesis and organization of the apical membrane of epithelial cells of the thick ascending limb of Henle’s loop (TALH), where it promotes formation of complex filamentous gel-like structure that may play a role in the water barrier permeability.
The protein encoded by this gene is the most abundant protein in mammalian urine under physiological conditions. Its excretion in urine follows proteolytic cleavage of the ectodomain of its glycosyl phosphatidylinosital-anchored counterpart that is situated on the luminal cell surface of the loop of Henle. This protein may act as a constitutive inhibitor of calcium crystallization in renal fluids. Excretion of this protein in urine may provide defense against urinary tract infections caused by uropathogenic bacteria. Defects in this gene are associated with the renal disorders medullary cystic kidney disease-2 (MCKD2), glomerulocystic kidney disease with hyperuricemia and isosthenuria (GCKDHI), and familial juvenile hyperuricemic nephropathy (FJHN). Alternative splicing of this gene results in multiple transcript variants.
Source: NCBI Gene 7369 — RefSeq curated summary.
At a glance
- Gene–disease (curated): autosomal dominant medullary cystic kidney disease with or without hyperuricemia (Definitive, ClinGen) — +3 more curated relationships
- GWAS associations: 47
- Clinical variants (ClinVar): 624 total — 32 pathogenic, 67 likely-pathogenic
- Phenotypes (HPO): 40
- MANE Select transcript:
NM_003361
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:12559 |
| Approved symbol | UMOD |
| Name | uromodulin |
| Location | 16p12.3 |
| Locus type | gene with protein product |
| Status | Approved |
| Ensembl gene | ENSG00000169344 |
| Ensembl biotype | protein_coding |
| OMIM | 191845 |
| Entrez | 7369 |
Gene structure
Transcript identifiers
Ensembl transcripts: 36 — 35 protein_coding, 1 protein_coding_CDS_not_defined
ENST00000396134, ENST00000396138, ENST00000570331, ENST00000570689, ENST00000570757, ENST00000570972, ENST00000571174, ENST00000573567, ENST00000574195, ENST00000576546, ENST00000576688, ENST00000577168, ENST00000863071, ENST00000863072, ENST00000863073, ENST00000863074, ENST00000863075, ENST00000863076, ENST00000863077, ENST00000863078, ENST00000863079, ENST00000863080, ENST00000863081, ENST00000863082, ENST00000863083, ENST00000863084, ENST00000863085, ENST00000863086, ENST00000863087, ENST00000863088, ENST00000863089, ENST00000863090, ENST00000863091, ENST00000863092, ENST00000863093, ENST00000863094
RefSeq mRNA: 7 — MANE Select: NM_003361
NM_001008389, NM_001278614, NM_001378232, NM_001378233, NM_001378234, NM_001378235, NM_003361
CCDS: CCDS10583, CCDS61876
Canonical transcript exons
ENST00000396138 — 11 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001143280 | 20346126 | 20346334 |
| ENSE00001143289 | 20348223 | 20348330 |
| ENSE00001143298 | 20348436 | 20349212 |
| ENSE00001262928 | 20344024 | 20344172 |
| ENSE00001524049 | 20352689 | 20352715 |
| ENSE00003492363 | 20335482 | 20335520 |
| ENSE00003515611 | 20341091 | 20341336 |
| ENSE00003533927 | 20350650 | 20350839 |
| ENSE00003554242 | 20336646 | 20336727 |
| ENSE00003625995 | 20337291 | 20337453 |
| ENSE00003911769 | 20333051 | 20333375 |
Expression profiles
Bgee: expression breadth ubiquitous, 104 present calls, max score 99.98.
FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.4303 / max 368.1685, expressed in 5 samples.
FANTOM5 promoters (6 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 156685 | 0.3685 | 5 |
| 156682 | 0.0365 | 5 |
| 156684 | 0.0088 | 3 |
| 156687 | 0.0078 | 3 |
| 156683 | 0.0050 | 3 |
| 156686 | 0.0037 | 3 |
Top tissues by expression
276 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| renal medulla | UBERON:0000362 | 99.98 | gold quality |
| adult organism | UBERON:0007023 | 99.85 | gold quality |
| adult mammalian kidney | UBERON:0000082 | 99.51 | gold quality |
| metanephros cortex | UBERON:0010533 | 99.43 | gold quality |
| nephron tubule | UBERON:0001231 | 99.23 | gold quality |
| kidney epithelium | UBERON:0004819 | 98.16 | gold quality |
| metanephric glomerulus | UBERON:0004736 | 97.00 | gold quality |
| renal glomerulus | UBERON:0000074 | 96.80 | gold quality |
| kidney | UBERON:0002113 | 95.88 | gold quality |
| cortex of kidney | UBERON:0001225 | 91.79 | gold quality |
| metanephros | UBERON:0000081 | 90.73 | gold quality |
| body of pancreas | UBERON:0001150 | 75.90 | gold quality |
| colonic epithelium | UBERON:0000397 | 71.43 | gold quality |
| endothelial cell | CL:0000115 | 66.86 | gold quality |
| pancreas | UBERON:0001264 | 62.58 | gold quality |
| cervix squamous epithelium | UBERON:0006922 | 60.38 | gold quality |
| urethra | UBERON:0000057 | 60.25 | gold quality |
| endometrium epithelium | UBERON:0004811 | 58.82 | gold quality |
| skeletal muscle tissue of biceps brachii | UBERON:0004502 | 58.58 | gold quality |
| cerebellar vermis | UBERON:0004720 | 57.64 | gold quality |
| sperm | CL:0000019 | 57.59 | gold quality |
| male germ cell | CL:0000015 | 57.21 | gold quality |
| thymus | UBERON:0002370 | 56.20 | gold quality |
| penis | UBERON:0000989 | 55.20 | gold quality |
| parotid gland | UBERON:0001831 | 55.08 | gold quality |
| saphenous vein | UBERON:0007318 | 54.90 | gold quality |
| pericardium | UBERON:0002407 | 54.85 | gold quality |
| inferior vagus X ganglion | UBERON:0005363 | 54.72 | gold quality |
| dorsal root ganglion | UBERON:0000044 | 54.67 | gold quality |
| trachea | UBERON:0003126 | 54.52 | gold quality |
Single-cell (SCXA)
Detected in 4 experiment(s), a significant marker in 3.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-GEOD-131882 | yes | 3177.69 |
| E-CURD-119 | yes | 2084.77 |
| E-ANND-3 | yes | 4.08 |
| E-CURD-135 | no | 2262.39 |
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): HNF1B
miRNA regulators (miRDB)
23 targeting UMOD, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3064-3P | 100.00 | 70.09 | 1254 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-103A-3P | 99.98 | 69.14 | 1595 |
| HSA-MIR-107 | 99.98 | 69.14 | 1595 |
| HSA-MIR-497-5P | 99.92 | 71.83 | 2674 |
| HSA-MIR-627-3P | 99.90 | 71.42 | 3316 |
| HSA-MIR-15A-5P | 99.90 | 72.80 | 2787 |
| HSA-MIR-15B-5P | 99.90 | 72.78 | 2798 |
| HSA-MIR-16-5P | 99.90 | 72.80 | 2780 |
| HSA-MIR-195-5P | 99.90 | 72.81 | 2805 |
| HSA-MIR-6838-5P | 99.89 | 71.94 | 2690 |
| HSA-MIR-424-5P | 99.89 | 71.90 | 2641 |
| HSA-MIR-4428 | 99.73 | 66.41 | 1733 |
| HSA-MIR-4310 | 99.59 | 68.84 | 2527 |
| HSA-MIR-4477B | 99.23 | 70.49 | 1733 |
| HSA-MIR-4478 | 99.07 | 65.16 | 2320 |
| HSA-MIR-3619-5P | 99.00 | 68.87 | 2308 |
| HSA-MIR-6760-5P | 98.87 | 66.73 | 1515 |
| HSA-MIR-214-3P | 98.71 | 68.12 | 2128 |
| HSA-MIR-761 | 98.71 | 68.07 | 2051 |
| HSA-MIR-6878-5P | 98.49 | 67.91 | 2142 |
| HSA-MIR-8055 | 97.62 | 66.09 | 1023 |
| HSA-MIR-196B-3P | 85.79 | 67.95 | 91 |
Literature-anchored findings (GeneRIF, showing 40)
- We identified a silent polymorphism in the UMOD gene at codon C174 which co-segregates with autosomal dominant medullary cystic kidney disease in the ADMCKD2 family. (PMID:11730273)
- binds to virulent Bordetella pertussis and reduces its adherence to both renal and pulmonary epithelial cells (PMID:11932463)
- Uromodulin promoter directs high-level expression of biologically active human alpha1-antitrypsin into mouse urine. (PMID:11982485)
- Mutations of the UMOD gene are responsible for medullary cystic kidney disease 2 and familial juvenile hyperuricaemic nephropathy (PMID:12471200)
- the effects of Tamm-Horsfall protein on the protection of oxalate induced radical injury may be partly due to its intact glycosylation and its adhesion to the cell membrane. (PMID:12624657)
- Two genes predisposing to dominant MCKD, MCKD1 and MCKD2, have been localized to chromosome 1q21 and 16p12. Review. (PMID:12832729)
- specific role of exon 4 encoded sequence of UMOD in the generation of the medullary cystic kidney disease type 2 renal phenotype. (PMID:14531790)
- this study points to a mutation clustering in exon 4 of UMOD as a major genetic defect in familial juvenile hyperuricemic nephropathy. (PMID:14569098)
- Species variations of the glycomoiety of THP can lead to the differential binding of THP to type 1-fimbriated E. coli. (PMID:14570881)
- degree of conversion of the tetrasaccharidic Sd(a) precursor into the final pentasaccharidic Sd(a) form can be considered to result from a very closely related pattern of glycosylation for genetically homogeneous individuals (PMID:15033942)
- evidence for the mutation of the UMOD gene in the majority of Japanese families with familial juvenile hyperuricemic nephropathy (PMID:15086896)
- individuals with two UMOD mutations are viable, but they do have more severe disease on average than heterozygotes. (PMID:15253706)
- Tamm-Horsfall protein has immunomodulatory role on polymorphpolymorphonuclear leukocyte functions(apoptosis,chemotaxis,phagocytosis). (PMID:15266028)
- the autosomal-dominant gene mutations responsible for UMOD-associated kidney disease cause a profound reduction of THP excretion. (PMID:15327389)
- Excretion of uromodulin is reduced in familial juvenile hyperuricaemic nephropathy. (PMID:15575003)
- D8C, a novel domain present in UMOD, mutates in familial juvenile hyperuricemia. (PMID:15589826)
- Tamm-Horsfall protein in a 16-month-old girl with surgical resection of a nephroblastoma after pre-operative chemotherapy (PMID:15785410)
- A novel mutation (Gln316Pro) was found in exon 5. There is provide additional evidence for the existence of a fourth calcium-binding epidermal growth factor-like domain in the structure of Tamm-Horsfall protein. (PMID:15983957)
- We identified a new candidate uromodulin-associated kidney disease locus on chromosome 1q41 (PMID:16164624)
- 12 different uromodulin missense mutations were found to lead to defective endoplasmic reticulum to Golgi protein transport, suggesting a common pathogenetic mechanism in medullary cystic kidney disease and familial juvenile hyperuricemic nephropathy. (PMID:17010121)
- a mutation in UMOD gene may lead to familial nephropathy associated with hyperuricemia (PMID:17065110)
- there are different urinary and plasma mutant uromodulin profiles in early and late familial juvenile hyperuricemic nephropathy (PMID:17151335)
- Haplotype analysis showed cosegragation with the phenotype in all eight affected individuals indicating that the uromodulin C744G mutation may be due to a founder effect. (PMID:17245395)
- Tamm-Horsfall glycoprotein from renal transplant patients is not only modified in glycosylation but bears an apoptosis-inducing capacity on mononuclear cells and polymorphonuclear neutrophils, leading to an impaired immune function in patients. (PMID:18047931)
- Intact protein core structure of Tamm-Horsfall glycoprotein, but not carbohydrate side-chains, is essential for protein-binding and cell-stimulating activities of the molecule. (PMID:18068104)
- Assessed tubular function in diabetic children by measuring Tamm-Horsfall protein and glutathione S-transferase levels in urine. (PMID:18351395)
- Urinary uromodulin is generated by a conserved C-terminal proteolytic cleavage and retains its entire ZP domain. (PMID:18375198)
- mutations in its gene as a cause of familial juvenile hyperuricemic nephropathy (PMID:18409515)
- Mutant uromodulin causes uricemic underexcretion and hyperuricemia (PMID:18409531)
- patients with interstitial cystitis(IC)with decreased uromodulin and kininogen had worsening IC severity.Uromodulin and kininogen were significantly less present in the urine of the IC group vs the AC group. (PMID:18455532)
- Phenotypes of transgenic mice harboring mutant human UMOD gene (PMID:18600511)
- UMOD is a potential biochemical marker of therapeutic response of the kidney to therapy in Fabry disease. (PMID:18651238)
- The finding that LZP might act as a new partner of THP would provide novel insights into renal functions related to THP and LZP, such as the urothelial permeability barrier and the host defense against the adhesion of pathogens. (PMID:18830570)
- UMOD mutations do not seem to be a significant cause of congenital anomalies of the kidney and uninary tract in this cohort. (PMID:18846391)
- This novel UMOD sequence variant, which is associated with an immunohistochemical pattern different from previous reports and a histological picture characterized by immature renal structures, suggests a possible role for UMOD in renal development (PMID:18950917)
- genetic analysis of novel D196Y mutation in UMOD gene in family cohort with familial juvenile hyperuricemic nephropathy age-related protein excretion levels (PMID:19203555)
- Familial juvenile hyperuricaemic nephropathy-causing uromodulin mutants are impaired in protein maturation and trafficking. (PMID:19465746)
- Elevated uromodulin concentrations precede the onset of chronic kidney disease and associate with a common polymorphism in the UMOD region. (PMID:19959715)
- The combined analysis of serum and urinary uromodulin provides new insights into the role of uromodulin in chronic kidney disease (CKD) and suggests that uromodulin may be an active player in CKD progression. (PMID:20075439)
- While renal functional decline is slow in individuals with UMOD mutations, it may appear early in life and be associated with marked hyperuricemia. (PMID:20151160)
Cross-species orthologs
2 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| mus_musculus | Umod | ENSMUSG00000030963 |
| rattus_norvegicus | Umod | ENSRNOG00000015557 |
Paralogs (5): TECTB (ENSG00000119913), OIT3 (ENSG00000138315), GP2 (ENSG00000169347), ZPLD1 (ENSG00000170044), UMODL1 (ENSG00000177398)
Protein
Protein identifiers
Uromodulin — P07911 (reviewed: P07911)
Alternative names: Tamm-Horsfall urinary glycoprotein
All UniProt accessions (10): P07911, I3L1M3, I3L2J2, I3L2K2, I3L3E0, I3L3Z4, I3L4B0, I3L4Y6, Q8NHW8, X6RBG4
UniProt curated annotations — full annotation on UniProt →
Function. Functions in biogenesis and organization of the apical membrane of epithelial cells of the thick ascending limb of Henle’s loop (TALH), where it promotes formation of complex filamentous gel-like structure that may play a role in the water barrier permeability. May serve as a receptor for binding and endocytosis of cytokines (IL-1, IL-2) and TNF. Facilitates neutrophil migration across renal epithelia. In the urine, may contribute to colloid osmotic pressure, retards passage of positively charged electrolytes, and inhibits formation of liquid containing supersaturated salts and subsequent formation of salt crystals. Protects against urinary tract infections by binding to type 1 fimbriated E.coli. Binds to bacterial adhesin fimH which mediates the stable formation of bacterial aggregates, prevents the binding of E.coli to uroplakins UPK1A and UPK1B which act as urothelial receptors for type I fimbriae, and allows for pathogen clearance through micturation. Also promotes aggregation of other bacteria including K.pneumoniae, P.aeruginosa and S.mitis and so may also protect against other uropathogens.
Subunit / interactions. Homodimer that then polymerizes into long filaments. The filaments can additionally assemble laterally to form a sheet. The filaments consist of a zigzag-shaped backbone with laterally protruding arms which interact with bacterial adhesin fimH. Two fimH molecules can bind to a single UMOD monomer.
Subcellular location. Apical cell membrane. Basolateral cell membrane. Cell projection. Cilium membrane Secreted.
Tissue specificity. Expressed in the tubular cells of the kidney. Most abundant protein in normal urine (at protein level). Synthesized exclusively in the kidney. Expressed exclusively by epithelial cells of the thick ascending limb of Henle’s loop (TALH) and of distal convoluted tubule lumen.
Post-translational modifications. N-glycosylated. N-glycan heterogeneity at Asn-232: Hex7HexNAc6 (major) and dHex1Hex7HexNAc6 (minor); at Asn-322: dHex1Hex6HexNAc5 (minor), dHex1Hex7HexNAc6 (major) and dHex1Hex8HexNAc7 (minor); at Asn-396: Hex6HexNAc5 (major), dHex1Hex6HexNAc5 (minor) and Hex7HexNAc6 (minor). Glycosylated Asn-232 interacts with E.coli adhesin fimH. Other complex glycosylation sites may serve as binding sites for proteins from other bacteria inclduding K.pneumoniae, P.aeruginosa and S.mitis. Proteolytically cleaved at a conserved C-terminal proteolytic cleavage site to generate the secreted form found in urine. This cleavage is catalyzed by HPN.
Disease relevance. Tubulointerstitial kidney disease, autosomal dominant 1 (ADTKD1) [MIM:162000] A form of autosomal dominant tubulointerstitial kidney disease, a genetically heterogeneous disorder characterized by slowly progressive loss of kidney function, bland urinary sediment, hyperuricemia, absent or mildly increased albuminuria, lack of severe hypertension during the early stages, and normal or small kidneys on ultrasound. Renal histology shows variable abnormalities including interstitial fibrosis with tubular atrophy, microcystic dilatation of the tubules, thickening of tubular basement membranes, medullary cysts, and secondary glomerulosclerotic or glomerulocystic changes with abnormal glomerular tufting. There is significant variability, as well as incomplete penetrance. The disease is caused by variants affecting the gene represented in this entry.
Domain organisation. The ZP domain mediates polymerization, leading to the formation of long filaments. The core of the filament consists of interlocked ZP domains which assemble into a helical structure. Each ZP domain consists of an N-terminal (ZP-N) and C-terminal (ZP-C) region connected by a flexible linker; the linker allows the ZP domain to wrap around the ZP-C subdomain of the preceding subunit. The heavily glycosylated N-terminal part of the protein (containing several EGF-like domains) forms branches which protrude from the core and are involved in pathogen capture.
Isoforms (5)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P07911-1 | 1 | yes |
| P07911-2 | 2 | |
| P07911-3 | 3 | |
| P07911-4 | 4 | |
| P07911-5 | 5 |
RefSeq proteins (7): NP_001008390, NP_001265543, NP_001365161, NP_001365162, NP_001365163, NP_001365164, NP_003352* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000152 | EGF-type_Asp/Asn_hydroxyl_site | PTM |
| IPR000742 | EGF | Domain |
| IPR001507 | ZP_dom | Domain |
| IPR001881 | EGF-like_Ca-bd_dom | Domain |
| IPR009030 | Growth_fac_rcpt_cys_sf | Homologous_superfamily |
| IPR017977 | ZP_dom_CS | Conserved_site |
| IPR018097 | EGF_Ca-bd_CS | Conserved_site |
| IPR024731 | NELL2-like_EGF | Domain |
| IPR042235 | ZP-C_dom | Homologous_superfamily |
| IPR048290 | ZP_chr | Domain |
| IPR049883 | NOTCH1_EGF-like | Domain |
| IPR055355 | ZP-C | Domain |
| IPR055356 | ZP-N | Domain |
| IPR057774 | D8C_UMOD/GP2/OIT3-like | Domain |
Pfam: PF00100, PF07645, PF12947, PF23283, PF23344
UniProt features (147 total): sequence variant 40, strand 24, disulfide bond 24, mutagenesis site 11, glycosylation site 9, helix 8, region of interest 7, domain 6, turn 5, splice variant 4, sequence conflict 3, chain 2, signal peptide 1, site 1, lipid moiety-binding region 1, propeptide 1
Structure
Experimental structures (PDB)
10 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 4WRN | X-RAY DIFFRACTION | 3.2 |
| 6TQK | ELECTRON MICROSCOPY | 3.35 |
| 6ZS5 | ELECTRON MICROSCOPY | 3.5 |
| 6ZYA | ELECTRON MICROSCOPY | 3.5 |
| 9NU1 | ELECTRON MICROSCOPY | 3.6 |
| 6TQL | ELECTRON MICROSCOPY | 3.96 |
| 9NU2 | ELECTRON MICROSCOPY | 4.8 |
| 9NU3 | ELECTRON MICROSCOPY | 5 |
| 7PFP | ELECTRON MICROSCOPY | 6.1 |
| 7Q3N | ELECTRON MICROSCOPY | 7.4 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P07911-F1 | 83.00 | 0.50 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Catalytic / active sites (1): 587–588 (cleavage)
Post-translational modifications (1): 614
Disulfide bonds (24): 32–41, 35–50, 52–63, 69–83, 77–92, 94–106, 112–126, 120–135, 137–148, 150–161, 155–170, 174–267, 195–282, 217–255, 223–287, 248–256, 297–306, 300–315, 317–347, 335–425 …
Glycosylation sites (9): 38, 76, 80, 232, 275, 322, 396, 513, 513
Mutagenesis-validated functional residues (11):
| Position | Phenotype |
|---|---|
| 435 | impairs polymerization and filament formation of the secreted form. |
| 458 | leads to retention in the endoplasmic reticulum, probably due to misfolding. |
| 555–556 | abolishes polymerization, in a dominant-negative manner. no effect on protein trafficking or secretion. suppresses the d |
| 586–589 | abolishes cleavage by hpn. abolishes polymerization, in a dominant-negative manner. suppresses the dominant-negative los |
| 598–600 | decreased export from the endoplasmic reticulum, leading to decreased secretion. impairs polymerization. |
| 602–603 | decreased export from the endoplasmic reticulum, leading to decreased secretion. impairs polymerization. |
| 605–607 | no effect on secretion. does not impair polymerization. |
| 333 | abolishes polymerization and filament formation of the secreted form. |
| 415 | abolishes polymerization. no effect on protein trafficking or secretion. suppresses the dominant-negative loss of polyme |
| 421 | abolishes polymerization and filament formation of the secreted form. |
| 430 | impairs polymerization and filament formation of the secreted form. |
Function
Pathways and Gene Ontology
Reactome pathways
1 pathways
| ID | Pathway |
|---|---|
| R-HSA-446203 | Asparagine N-linked glycosylation |
MSigDB gene sets: 298 (showing top):
GOBP_EXCRETION, GOBP_RESPONSE_TO_NITROGEN_COMPOUND, GOBP_EPITHELIUM_DEVELOPMENT, GOBP_ACID_SECRETION, GOBP_HETEROPHILIC_CELL_CELL_ADHESION, GOBP_REGULATION_OF_BLOOD_PRESSURE, GOBP_METANEPHROS_DEVELOPMENT, GOBP_MYELOID_LEUKOCYTE_MIGRATION, GOBP_CIRCULATORY_SYSTEM_PROCESS, GOBP_INTRACELLULAR_PROTEIN_TRANSPORT, GOBP_RESPONSE_TO_ACID_CHEMICAL, GOBP_INFLAMMATORY_RESPONSE, GOBP_RESPONSE_TO_PEPTIDE, GOBP_METANEPHRIC_EPITHELIUM_DEVELOPMENT, GOBP_LOOP_OF_HENLE_DEVELOPMENT
GO Biological Process (64): organ or tissue specific immune response (GO:0002251), renal water homeostasis (GO:0003091), glomerular filtration (GO:0003094), protein folding (GO:0006457), lipid metabolic process (GO:0006629), intracellular calcium ion homeostasis (GO:0006874), intracellular sodium ion homeostasis (GO:0006883), autophagy (GO:0006914), inflammatory response (GO:0006954), cellular defense response (GO:0006968), endoplasmic reticulum organization (GO:0007029), heterophilic cell-cell adhesion (GO:0007157), leukocyte cell-cell adhesion (GO:0007159), regulation of blood pressure (GO:0008217), negative regulation of cell population proliferation (GO:0008285), RNA splicing (GO:0008380), response to xenobiotic stimulus (GO:0009410), response to water deprivation (GO:0009414), gene expression (GO:0010467), urate transport (GO:0015747), intracellular phosphate ion homeostasis (GO:0030643), intracellular chloride ion homeostasis (GO:0030644), response to lipopolysaccharide (GO:0032496), tumor necrosis factor-mediated signaling pathway (GO:0033209), multicellular organismal response to stress (GO:0033555), cellular response to unfolded protein (GO:0034620), regulation of urine volume (GO:0035809), ERAD pathway (GO:0036503), protein transport into plasma membrane raft (GO:0044861), citric acid secretion (GO:0046720), defense response to Gram-negative bacterium (GO:0050829), regulation of protein transport (GO:0051223), potassium ion homeostasis (GO:0055075), micturition (GO:0060073), renal sodium ion absorption (GO:0070294), protein localization to extracellular region (GO:0071692), urea transmembrane transport (GO:0071918), collecting duct development (GO:0072044), juxtaglomerular apparatus development (GO:0072051), metanephric ascending thin limb development (GO:0072218)
GO Molecular Function (3): calcium ion binding (GO:0005509), IgG binding (GO:0019864), protein binding (GO:0005515)
GO Cellular Component (16): spindle pole (GO:0000922), obsolete extracellular space (GO:0005615), endoplasmic reticulum (GO:0005783), Golgi lumen (GO:0005796), cilium (GO:0005929), cell surface (GO:0009986), membrane (GO:0016020), basolateral plasma membrane (GO:0016323), apical plasma membrane (GO:0016324), extrinsic component of membrane (GO:0019898), ciliary membrane (GO:0060170), extracellular exosome (GO:0070062), side of membrane (GO:0098552), extracellular region (GO:0005576), plasma membrane (GO:0005886), cell projection (GO:0042995)
Reactome top-level categories
Rollup of top-1 pathways:
| Category | Pathways |
|---|---|
| Post-translational protein modification | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 7 |
| membrane | 3 |
| intracellular monoatomic cation homeostasis | 2 |
| defense response | 2 |
| cell-cell adhesion | 2 |
| plasma membrane region | 2 |
| immune response | 1 |
| renal system process | 1 |
| multicellular organismal-level water homeostasis | 1 |
| renal filtration | 1 |
| cellular process | 1 |
| protein maturation | 1 |
| primary metabolic process | 1 |
| calcium ion homeostasis | 1 |
| sodium ion homeostasis | 1 |
| catabolic process | 1 |
| transmembrane transport | 1 |
| process utilizing autophagic mechanism | 1 |
| organelle organization | 1 |
| endomembrane system organization | 1 |
| blood circulation | 1 |
| regulation of biological quality | 1 |
| cell population proliferation | 1 |
| regulation of cell population proliferation | 1 |
| negative regulation of cellular process | 1 |
| RNA processing | 1 |
| response to chemical | 1 |
| response to stress | 1 |
| response to water | 1 |
| macromolecule biosynthetic process | 1 |
| nitrogen compound transport | 1 |
| metal ion binding | 1 |
| immunoglobulin binding | 1 |
| binding | 1 |
| spindle | 1 |
| cytoplasm | 1 |
| endomembrane system | 1 |
| intracellular membrane-bounded organelle | 1 |
| Golgi apparatus | 1 |
| intracellular organelle lumen | 1 |
Protein interactions and networks
STRING
2056 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| UMOD | IL1B | P01584 | 848 |
| UMOD | PKHD1 | P08F94 | 844 |
| UMOD | ALB | P02768 | 807 |
| UMOD | HNF1B | P35680 | 802 |
| UMOD | SPP1 | P10451 | 796 |
| UMOD | IL2 | P01585 | 781 |
| UMOD | MUC1 | P13931 | 717 |
| UMOD | REN | P00797 | 713 |
| UMOD | SLC12A1 | Q13621 | 709 |
| UMOD | AMBP | P00977 | 708 |
| UMOD | AQP2 | P41181 | 695 |
| UMOD | TNF | P01375 | 691 |
| UMOD | NPHP1 | O15259 | 671 |
| UMOD | IL1A | P01583 | 643 |
| UMOD | HAVCR1 | Q96D42 | 643 |
IntAct
21 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| COLEC11 | UMOD | psi-mi:“MI:0407”(direct interaction) | 0.560 |
| MBL2 | UMOD | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| FCN1 | UMOD | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| FCN2 | UMOD | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| FCN3 | UMOD | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| UMOD | psi-mi:“MI:0407”(direct interaction) | 0.440 | |
| UMOD | psi-mi:“MI:0407”(direct interaction) | 0.440 | |
| dsa-b | UMOD | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| LGALS1 | UMOD | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| LGALS2 | UMOD | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| LGALS3 | UMOD | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| MAL | UMOD | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| MLEC | UMOD | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| DLEC2 | UMOD | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| psl1a | UMOD | psi-mi:“MI:0407”(direct interaction) | 0.440 |
| UMOD | psi-mi:“MI:0915”(physical association) | 0.000 | |
| UMOD | psi-mi:“MI:0915”(physical association) | 0.000 |
BioGRID (7): UMOD (Affinity Capture-MS), UMOD (Protein-RNA), UMOD (Affinity Capture-RNA), UMOD (Reconstituted Complex), UMOD (Synthetic Lethality), UMOD (Affinity Capture-MS), UMOD (Two-hybrid)
ESM2 similar proteins: A0JPF9, A2VE29, A6QPN6, A8T658, B3SP85, E7E2N8, F1QVU0, H2N4I1, O00391, O08841, O95479, P06802, P07911, P13284, P20062, P23276, P48733, P55104, P56201, P59996, Q13219, Q16549, Q499T2, Q4R7M2, Q5R5C1, Q5REL7, Q5RER0, Q5RJG7, Q5U2X4, Q5XWD5, Q62849, Q6IUU3, Q6P6S4, Q80W65, Q86UX2, Q8BND5, Q8CFX1, Q8NCG5, Q92179, Q924C3
Diamond homologs: A1Z877, B5DFC9, H9JIQ1, O08523, O75443, O88322, P07911, P10493, P19218, P25291, P27590, P34501, P41950, P48733, P55259, Q0KHY3, Q14112, Q28833, Q3U492, Q5R5C1, Q5ZQU0, Q6ZWJ8, Q70E20, Q862Z3, Q8CJ69, Q8TER0, Q91X17, Q9D733, Q9IBG7, Q9Y6R7, Q9YH85, P02845, Q8N8U9, Q66IR0, Q6DFV8, Q8N2E2, O08524, Q8R4V5, Q96PL2, Q5DID0
SIGNOR signaling
1 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| HNF1B | “up-regulates quantity by expression” | UMOD | “transcriptional regulation” |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 13 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
Reactome pathways:
| Pathway | Partners | Fold | FDR |
|---|---|---|---|
| Initial triggering of complement | 5 | 300.5× | 4e-11 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
624 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 32 |
| Likely pathogenic | 67 |
| Uncertain significance | 306 |
| Likely benign | 108 |
| Benign | 36 |
Top pathogenic / likely-pathogenic (30)
| Variant ID | HGVS | Classification |
|---|---|---|
| 1184610 | NM_003361.4(UMOD):c.281G>C (p.Cys94Ser) | Pathogenic |
| 12254 | NM_003361.4(UMOD):c.529_555del (p.His177_Arg185del) | Pathogenic |
| 12255 | NM_003361.4(UMOD):c.443G>A (p.Cys148Tyr) | Pathogenic |
| 12256 | NM_003361.4(UMOD):c.649T>C (p.Cys217Arg) | Pathogenic |
| 12258 | NM_003361.4(UMOD):c.230G>A (p.Cys77Tyr) | Pathogenic |
| 12259 | NM_003361.4(UMOD):c.376T>C (p.Cys126Arg) | Pathogenic |
| 12260 | NM_003361.4(UMOD):c.383A>G (p.Asn128Ser) | Pathogenic |
| 12261 | NM_003361.4(UMOD):c.764G>A (p.Cys255Tyr) | Pathogenic |
| 12262 | NM_003361.4(UMOD):c.898T>G (p.Cys300Gly) | Pathogenic |
| 12263 | NM_003361.4(UMOD):c.943T>C (p.Cys315Arg) | Pathogenic |
| 1312491 | NM_003361.4(UMOD):c.335G>A (p.Cys112Tyr) | Pathogenic |
| 1458183 | NM_003361.4(UMOD):c.229T>C (p.Cys77Arg) | Pathogenic |
| 242346 | NM_003361.4(UMOD):c.278_289delinsCCGCCTCCT (p.Val93_Gly97delinsAlaAlaSerCys) | Pathogenic |
| 2443293 | NM_003361.4(UMOD):c.276C>G (p.Cys92Trp) | Pathogenic |
| 2499669 | NM_003361.4(UMOD):c.93G>C (p.Trp31Cys) | Pathogenic |
| 2499670 | NM_003361.4(UMOD):c.106C>T (p.His36Tyr) | Pathogenic |
| 2736325 | NM_003361.4(UMOD):c.674C>T (p.Thr225Met) | Pathogenic |
| 2736326 | NM_003361.4(UMOD):c.554G>A (p.Arg185His) | Pathogenic |
| 287876 | NM_003361.4(UMOD):c.744C>G (p.Cys248Trp) | Pathogenic |
| 3578739 | NM_003361.4(UMOD):c.860G>A (p.Cys287Tyr) | Pathogenic |
| 3647283 | NM_003361.4(UMOD):c.552G>T (p.Trp184Cys) | Pathogenic |
| 370029 | NM_003361.4(UMOD):c.490G>T (p.Glu164Ter) | Pathogenic |
| 39418 | NM_003361.4(UMOD):c.649T>G (p.Cys217Gly) | Pathogenic |
| 4813580 | NM_003361.4(UMOD):c.163G>A (p.Gly55Ser) | Pathogenic |
| 488632 | NM_003361.4(UMOD):c.358T>G (p.Cys120Gly) | Pathogenic |
| 586922 | NM_003361.4(UMOD):c.553C>T (p.Arg185Cys) | Pathogenic |
| 64644 | NM_003361.4(UMOD):c.743G>C (p.Cys248Ser) | Pathogenic |
| 803225 | NM_003361.4(UMOD):c.890G>A (p.Cys297Tyr) | Pathogenic |
| 807520 | NM_003361.4(UMOD):c.651C>G (p.Cys217Trp) | Pathogenic |
| 94133 | NM_003361.4(UMOD):c.944G>A (p.Cys315Tyr) | Pathogenic |
SpliceAI
1445 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 16:20338059:T:A | donor_gain | 1.0000 |
| 16:20341085:CCTTA:C | donor_loss | 1.0000 |
| 16:20341088:TACCT:T | donor_loss | 1.0000 |
| 16:20341089:A:T | donor_loss | 1.0000 |
| 16:20341090:C:CA | donor_loss | 1.0000 |
| 16:20341335:CA:C | acceptor_gain | 1.0000 |
| 16:20341337:C:CC | acceptor_gain | 1.0000 |
| 16:20341341:C:CT | acceptor_gain | 1.0000 |
| 16:20346224:TCAGG:T | donor_gain | 1.0000 |
| 16:20349208:CCATC:C | acceptor_gain | 1.0000 |
| 16:20349209:CATC:C | acceptor_gain | 1.0000 |
| 16:20349209:CATCC:C | acceptor_gain | 1.0000 |
| 16:20349210:ATC:A | acceptor_gain | 1.0000 |
| 16:20349210:ATCC:A | acceptor_loss | 1.0000 |
| 16:20349211:TC:T | acceptor_gain | 1.0000 |
| 16:20349212:CC:C | acceptor_gain | 1.0000 |
| 16:20349213:C:CC | acceptor_gain | 1.0000 |
| 16:20349213:CTGTG:C | acceptor_loss | 1.0000 |
| 16:20349214:T:G | acceptor_loss | 1.0000 |
| 16:20350644:ACTT:A | donor_loss | 1.0000 |
| 16:20350646:TTAC:T | donor_loss | 1.0000 |
| 16:20350648:A:AC | donor_gain | 1.0000 |
| 16:20350648:ACTTG:A | donor_gain | 1.0000 |
| 16:20350649:C:CC | donor_gain | 1.0000 |
| 16:20350649:CT:C | donor_gain | 1.0000 |
| 16:20350649:CTT:C | donor_gain | 1.0000 |
| 16:20350649:CTTG:C | donor_gain | 1.0000 |
| 16:20350649:CTTGC:C | donor_gain | 1.0000 |
| 16:20341089:A:AC | donor_gain | 0.9900 |
| 16:20341090:C:CC | donor_gain | 0.9900 |
AlphaMissense
4527 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 16:20348695:C:A | W202C | 0.994 |
| 16:20348695:C:G | W202C | 0.994 |
| 16:20341150:G:C | C506W | 0.993 |
| 16:20348611:C:A | W230C | 0.993 |
| 16:20348611:C:G | W230C | 0.993 |
| 16:20341152:A:G | C506R | 0.992 |
| 16:20348527:C:A | W258C | 0.992 |
| 16:20348527:C:G | W258C | 0.992 |
| 16:20348633:C:G | C223S | 0.992 |
| 16:20348634:A:T | C223S | 0.992 |
| 16:20337388:A:G | F548S | 0.990 |
| 16:20337334:C:T | C566Y | 0.989 |
| 16:20337335:A:G | C566R | 0.989 |
| 16:20337388:A:C | F548C | 0.989 |
| 16:20341151:C:T | C506Y | 0.989 |
| 16:20348548:C:A | W251C | 0.989 |
| 16:20348548:C:G | W251C | 0.989 |
| 16:20337333:A:C | C566W | 0.988 |
| 16:20337373:A:C | F553C | 0.988 |
| 16:20341151:C:G | C506S | 0.987 |
| 16:20341152:A:T | C506S | 0.987 |
| 16:20341279:G:C | F463L | 0.987 |
| 16:20341279:G:T | F463L | 0.987 |
| 16:20341280:A:C | F463C | 0.987 |
| 16:20341281:A:G | F463L | 0.987 |
| 16:20348440:G:C | C287W | 0.987 |
| 16:20348634:A:G | C223R | 0.986 |
| 16:20337340:A:G | L564P | 0.985 |
| 16:20337367:A:C | F555C | 0.985 |
| 16:20337387:A:C | F548L | 0.985 |
dbSNP variants (sampled 300 via entrez): RS1000220873 (16:20332932 T>A), RS1000654473 (16:20344421 G>A), RS1000705091 (16:20339436 A>C,G), RS1000720661 (16:20345889 G>A), RS1000758921 (16:20337640 T>C,G), RS1000826505 (16:20339096 G>A), RS1000835140 (16:20342613 G>C,T), RS1000866329 (16:20342896 G>A,C), RS1001087916 (16:20337302 T>C), RS1001165693 (16:20348903 T>C), RS1001332518 (16:20347032 T>C), RS1001361045 (16:20341811 G>A), RS1001524457 (16:20338421 A>G), RS1001595825 (16:20347341 A>G), RS1001715389 (16:20343640 G>A)
Disease associations
OMIM: gene MIM:191845 | disease phenotypes: MIM:162000, MIM:603860, MIM:609886
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| glomerulocystic kidney disease with hyperuricemia and isosthenuria | Definitive | Autosomal dominant |
| familial juvenile hyperuricemic nephropathy type 1 | Strong | Autosomal dominant |
| autosomal dominant medullary cystic kidney disease with hyperuricemia | Supportive | Autosomal dominant |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| autosomal dominant medullary cystic kidney disease with or without hyperuricemia | Definitive | AD |
Mondo (9): familial juvenile hyperuricemic nephropathy type 1 (MONDO:0008073), autosomal dominant medullary cystic kidney disease with or without hyperuricemia (MONDO:0008264), kidney failure (MONDO:0001106), kidney disorder (MONDO:0005240), essential hypertension (MONDO:0001134), cystic kidney disease (MONDO:0002473), chronic kidney disease (MONDO:0005300), (MONDO:0012356), (MONDO:0019511)
Orphanet (4): OBSOLETE: Familial juvenile hyperuricemic nephropathy type 1 (Orphanet:209886), Autosomal dominant tubulointerstitial kidney disease (Orphanet:34149), UMOD-related autosomal dominant tubulointerstitial kidney disease (Orphanet:88950), NON RARE IN EUROPE: Essential hypertension (Orphanet:243761)
HPO phenotypes
40 total (30 of 40 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000076 | Vesicoureteral reflux |
| HP:0000083 | Renal insufficiency |
| HP:0000089 | Renal hypoplasia |
| HP:0000092 | Renal tubular atrophy |
| HP:0000093 | Proteinuria |
| HP:0000096 | Glomerular sclerosis |
| HP:0000103 | Polyuria |
| HP:0000107 | Renal cyst |
| HP:0000108 | Renal corticomedullary cysts |
| HP:0000123 | Nephritis |
| HP:0000790 | Hematuria |
| HP:0000794 | IgA deposition in the glomerulus |
| HP:0000822 | Hypertension |
| HP:0001942 | Metabolic acidosis |
| HP:0001970 | Tubulointerstitial nephritis |
| HP:0001997 | Gout |
| HP:0002149 | Hyperuricemia |
| HP:0003138 | Increased blood urea nitrogen |
| HP:0003158 | Hyposthenuria |
| HP:0003165 | Elevated circulating parathyroid hormone level |
| HP:0003259 | Elevated circulating creatinine concentration |
| HP:0003584 | Late onset |
| HP:0003596 | Middle age onset |
| HP:0003621 | Juvenile onset |
| HP:0003676 | Progressive |
| HP:0003774 | Stage 5 chronic kidney disease |
| HP:0004719 | Hyperechogenic kidneys |
| HP:0004722 | Thickened glomerular basement membrane |
| HP:0005565 | Reduced renal corticomedullary differentiation |
GWAS associations
47 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST000397_1 | Renal function and chronic kidney disease | 5.000000e-16 |
| GCST000397_3 | Renal function and chronic kidney disease | 2.000000e-12 |
| GCST000649_18 | Chronic kidney disease | 1.000000e-20 |
| GCST000742_1 | Chronic kidney disease and serum creatinine levels | 4.000000e-10 |
| GCST000849_1 | Hypertension | 4.000000e-11 |
| GCST001315_2 | Femoral neck bone geometry | 2.000000e-06 |
| GCST001606_8 | Renal function-related traits (sCR) | 1.000000e-10 |
| GCST001607_7 | Renal function-related traits (eGRFcrea) | 4.000000e-10 |
| GCST002376_2 | Urinary uromodulin levels | 8.000000e-73 |
| GCST002720_1 | Kidney function decline traits | 2.000000e-17 |
| GCST002720_6 | Kidney function decline traits | 8.000000e-13 |
| GCST002720_7 | Kidney function decline traits | 9.000000e-08 |
| GCST002720_8 | Kidney function decline traits | 4.000000e-06 |
| GCST003372_56 | Glomerular filtration rate (creatinine) | 9.000000e-43 |
| GCST003373_1 | Glomerular filtration rate in diabetics (creatinine) | 2.000000e-08 |
| GCST003374_10 | Chronic kidney disease | 2.000000e-25 |
| GCST003401_13 | Glomerular filtration rate in non diabetics (creatinine) | 5.000000e-36 |
| GCST003790_11 | Glomerular filtration rate | 2.000000e-15 |
| GCST003790_5 | Glomerular filtration rate | 4.000000e-07 |
| GCST003790_6 | Glomerular filtration rate | 2.000000e-09 |
| GCST004292_9 | Glomerular filtration rate (creatinine) | 5.000000e-40 |
| GCST004293_1 | Glomerular filtration rate (cystatin C) | 3.000000e-10 |
| GCST005891_3 | Glomerular filtration rate in diabetes | 2.000000e-12 |
| GCST005892_2 | Glomerular filtration rate in type 2 diabetes | 4.000000e-12 |
| GCST006023_11 | Hypertension | 6.000000e-08 |
| GCST006190_84 | Diastolic blood pressure x smoking status (ever vs never) interaction (2df test) | 6.000000e-08 |
| GCST006191_2 | Diastolic blood pressure x smoking status (ever vs never) interaction (1df test) | 2.000000e-08 |
| GCST007094_91 | Diastolic blood pressure | 2.000000e-09 |
| GCST007344_13 | Estimated glomerular filtration rate | 4.000000e-20 |
| GCST007344_16 | Estimated glomerular filtration rate | 3.000000e-83 |
EFO canonical traits (10, from GWAS)
| EFO ID | Trait name |
|---|---|
| EFO:0004511 | femoral neck bone geometry |
| EFO:0005663 | urinary uromodulin measurement |
| EFO:0006829 | GFR change measurement |
| EFO:0004617 | cystatin C measurement |
| EFO:0006336 | diastolic blood pressure |
| EFO:0006527 | smoking status measurement |
| EFO:0009104 | hyperuricemia |
| EFO:0004761 | uric acid measurement |
| EFO:0009930 | Calcium channel blocker use measurement |
| EFO:0004531 | urate measurement |
MeSH disease descriptors (7)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D000075222 | Essential Hypertension | C14.907.489.165 |
| D007674 | Kidney Diseases | C12.050.351.968.419; C12.200.777.419; C12.950.419 |
| D052177 | Kidney Diseases, Cystic | C12.050.351.968.419.403; C12.200.777.419.403; C12.950.419.403 |
| D007676 | Kidney Failure, Chronic | C12.050.351.968.419.780.750.500; C12.200.777.419.780.750.500; C12.950.419.780.750.500; C23.550.291.500.906.500 |
| D051437 | Renal Insufficiency | C12.050.351.968.419.780; C12.200.777.419.780; C12.950.419.780 |
| C563693 | Glomerulocystic Kidney Disease with Hyperuricemia and Isosthenuria (supp.) | |
| C536137 | Medullary cystic kidney disease 1 (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
PharmGKB variants
1 variants.
| Variant | Genes | Level | Score | #Clin annots | Drugs |
|---|---|---|---|---|---|
| rs12917707 | UMOD | 0.00 | 0 |
CTD chemical–gene interactions
7 total (human), top 7 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| CGP 52608 | affects binding, increases reaction | 1 |
| Acetazolamide | increases expression | 1 |
| Arsenates | affects cotreatment, increases expression | 1 |
| Atrazine | affects cotreatment, increases expression | 1 |
| Benzo(a)pyrene | decreases methylation | 1 |
| Calcium | affects binding | 1 |
| Lead | affects methylation | 1 |
Clinical trials (associated diseases)
300 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00123331 | PHASE4 | COMPLETED | Rapamycin Use in Calcineurin Inhibitor (CNI)-Free Immunosuppression for Stabilization/Improvement of Renal Function After Heart Transplantation |
| NCT00123461 | PHASE4 | COMPLETED | Study of Safety and Efficacy of Doxercalciferol in Patients With Chronic Kidney Disease, Stage 3 or 4, and Secondary Hyperparathyroidism |
| NCT00144118 | PHASE4 | TERMINATED | The Effect of Isoflurane or Sevoflurane on Kidney Function |
| NCT00184769 | PHASE4 | COMPLETED | Growth Hormone Treatment in Infants Aged 1 to 2 Years With Chronic Renal Insufficiency (CRI) and Growth Retardation. |
| NCT00186329 | PHASE4 | COMPLETED | BNP for Cardio-Renal Decompensation Syndrome (BNP-CARDS) |
| NCT00194883 | PHASE4 | SUSPENDED | Effect of Cytokines on Growth of Children With Chronic Kidney Failure |
| NCT00195429 | PHASE4 | COMPLETED | A Study Comparing the Withdrawal of Steroids or Tacrolimus in Kidney Transplant Recipients |
| NCT00195468 | PHASE4 | COMPLETED | Study Comparing Cyclosporine Dose Reduction vs. Cyclosporine Elimination in Kidney Transplant Recipients Taking Sirolimus |
| NCT00195481 | PHASE4 | COMPLETED | Study Evaluating Sirolimus in Kidney Transplant Recipients in India |
| NCT00209417 | PHASE4 | TERMINATED | Renal Effects of Two Iodinated Contrast Media in Patients at Risk Undergoing Computed Tomography |
| NCT00246129 | PHASE4 | COMPLETED | CamTac Trial:Campath-Tacrolimus vs IL2R MoAb/Tacrolimus/MMF in Renal Transplantation |
| NCT00247325 | PHASE4 | COMPLETED | RECOVER:Comparison of Renal Toxicity Between Visipaque(Iodixanol)and Hexabrix(Ioxaglate)in Renal Insufficiency Undergoing Coronary Angiography |
| NCT00254709 | PHASE4 | COMPLETED | Study Evaluating Two Different Sirolimus-based Immunosuppressive Regimens in Elderly Kidney Transplant Recipients |
| NCT00259441 | PHASE4 | COMPLETED | PROMISS: Simvastatin Prevents the Contrast Induced Acute Renal Failure in Patients With Renal Insufficiency Undergoing Coronary Angiography |
| NCT00261820 | PHASE4 | COMPLETED | Study Comparing Two Immunosuppressive Regimens in De Novo Renal Allograft Recipients |
| NCT00266123 | PHASE4 | COMPLETED | Study Comparing Two Sirolimus Regimens vs. Tacrolimus and Mycophenolate Mofetil Regimen in Kidney Transplant Recipients |
| NCT00282217 | PHASE4 | COMPLETED | Study Evaluating Sirolimus in the Treatment of Kidney Transplant |
| NCT00294866 | PHASE4 | COMPLETED | Effect of Paricalcitol on Markers of Inflammation in Hemodialysis Patients |
| NCT00295555 | PHASE4 | COMPLETED | Doxazosin Effects on ABPM in Hypertensive Patients With Diabetic Nephropathy |
| NCT00356954 | PHASE4 | COMPLETED | NASPI: N-Acetylcysteine vs. Ascorbic Acid for Prevention of Contrast Induced Nephropathy in Renal Insufficiency Undergoing Coronary Catheterization |
| NCT00368901 | PHASE4 | COMPLETED | STAAR-2 Clinical Study |
| NCT00369382 | PHASE4 | COMPLETED | Study Of The Safety And Efficacy Of Conversion From A CNI To Sirolimus In Renally-Impaired Heart Transplant Recipients |
| NCT00369733 | PHASE4 | COMPLETED | STAAR-3 Clinical Study |
| NCT00369772 | PHASE4 | COMPLETED | STAAR-1 Clinical Study |
| NCT00396435 | PHASE4 | COMPLETED | Correction of Anaemia and Progression of Renal Failure on Transplanted Patients |
| NCT00412802 | PHASE4 | COMPLETED | Adaptation Dose of Enoxaparin in Moderate Renal Failure Patients With Acute Coronary Syndrome |
| NCT00483275 | PHASE4 | WITHDRAWN | Fall Prevention by Alfacalcidol and Training |
| NCT00492518 | PHASE4 | COMPLETED | Acetylcysteine, Theophylline, and a Combination of Both in the Prophylaxis of Contrast-Induced Nephropathy |
| NCT00495365 | PHASE4 | TERMINATED | A Dose Conversion Study of Epoetin Alfa in Subjects With the Anemia of Chronic Kidney Disease. |
| NCT00527059 | PHASE4 | UNKNOWN | Renal Effects of Levosimendan in Patients Admitted With Acute Decompensated Heart Failure |
| NCT00566033 | PHASE4 | COMPLETED | Multiple Intervention and AUdit in Renal Diseases to Optimize Care |
| NCT00584350 | PHASE4 | UNKNOWN | Prevention of Contrast Nephropathy During Diagnostic Coronary Angiogram or PCI With Hydratation Based on LEVDP |
| NCT00613964 | PHASE4 | TERMINATED | The Effects of Carperitide on Short and Long-term Prognosis in Patients With Both Cardiac and Renal Failure |
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| NCT00748072 | PHASE4 | COMPLETED | 1-deamino 8-d-arginine Vasopressin (DDAVP) in Percutaneous Ultrasound-guided Renal Biopsy |
| NCT00748904 | PHASE4 | WITHDRAWN | Rifaximin Versus Lactulose in Renal Failure |
| NCT00823628 | PHASE4 | COMPLETED | Contrast-medium Induced Nephrotoxicity in Patients Undergoing Coronary Angiography - Iodixanol Versus Iopromide |
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Related Atlas pages
- Associated diseases: familial juvenile hyperuricemic nephropathy type 1, autosomal dominant medullary cystic kidney disease with or without hyperuricemia
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): autosomal dominant medullary cystic kidney disease with or without hyperuricemia, chronic kidney disease, cystic kidney disease, essential hypertension, familial juvenile hyperuricemic nephropathy type 1, hypertensive disorder, kidney disorder, kidney failure, nephrolithiasis, type 1 diabetes mellitus