UNC45B
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Also known as UNC45
Summary
UNC45B (unc-45 myosin chaperone B, HGNC:14304) is a protein-coding gene on chromosome 17q12, encoding Protein unc-45 homolog B (Q8IWX7). Acts as a co-chaperone for HSP90 and is required for proper folding of the myosin motor domain.
This gene encodes a co-chaperone required for folding and accumulation of type II myosins. The protein consists of three tetratricopeptide repeat motifs at the N-terminus that form a complex with heat shock protein 90, a central region of unknown function that is conserved in all Unc-45 proteins, and a C-terminal Unc-45/Cro1/She4 domain. The protein is expressed at high levels in striated muscle, where its muscle myosin chaperone activity is dependent on heat shock protein 90 acting as a co-chaperone. A missense mutation in this gene has been associated with cataract development. Alternative splicing results in multiple transcript variants.
Source: NCBI Gene 146862 — RefSeq curated summary.
At a glance
- Gene–disease (curated): myofibrillar myopathy 11 (Strong, GenCC) — +3 more curated relationships
- GWAS associations: 1
- Clinical variants (ClinVar): 397 total — 3 pathogenic, 3 likely-pathogenic
- Phenotypes (HPO): 25
- MANE Select transcript:
NM_001267052
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:14304 |
| Approved symbol | UNC45B |
| Name | unc-45 myosin chaperone B |
| Location | 17q12 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | UNC45 |
| Ensembl gene | ENSG00000141161 |
| Ensembl biotype | protein_coding |
| OMIM | 611220 |
| Entrez | 146862 |
Gene structure
Transcript identifiers
Ensembl transcripts: 22 — 22 protein_coding
ENST00000268876, ENST00000394570, ENST00000591048, ENST00000870785, ENST00000870786, ENST00000870787, ENST00000958206, ENST00000958207, ENST00000958208, ENST00000958209, ENST00000958210, ENST00000958211, ENST00000958212, ENST00000958213, ENST00000958214, ENST00000958215, ENST00000958216, ENST00000958217, ENST00000958218, ENST00000958219, ENST00000958220, ENST00000958221
RefSeq mRNA: 4 — MANE Select: NM_001267052
NM_001033576, NM_001267052, NM_001308281, NM_173167
CCDS: CCDS11292, CCDS45648, CCDS76993
Canonical transcript exons
ENST00000394570 — 20 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001017509 | 35177017 | 35177130 |
| ENSE00001017510 | 35183427 | 35183582 |
| ENSE00001017511 | 35180559 | 35180676 |
| ENSE00001106162 | 35169837 | 35169931 |
| ENSE00001106167 | 35163995 | 35164166 |
| ENSE00001106173 | 35155296 | 35155464 |
| ENSE00001106175 | 35152893 | 35152982 |
| ENSE00001106181 | 35154574 | 35154741 |
| ENSE00001106187 | 35177495 | 35177610 |
| ENSE00001106203 | 35175968 | 35176034 |
| ENSE00001106208 | 35171322 | 35171462 |
| ENSE00001106210 | 35174242 | 35174369 |
| ENSE00001106213 | 35168061 | 35168361 |
| ENSE00001269943 | 35159375 | 35159545 |
| ENSE00001269975 | 35150048 | 35150223 |
| ENSE00001269984 | 35148973 | 35149009 |
| ENSE00001477620 | 35147817 | 35147910 |
| ENSE00001774788 | 35170114 | 35170255 |
| ENSE00002901076 | 35186299 | 35189343 |
| ENSE00003755147 | 35148264 | 35148431 |
Expression profiles
Bgee: expression breadth ubiquitous, 111 present calls, max score 99.72.
FANTOM5 (CAGE): breadth tissue_specific, TPM avg 1.3513 / max 188.3367, expressed in 112 samples.
FANTOM5 promoters (2 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 160337 | 1.2928 | 110 |
| 160338 | 0.0585 | 28 |
Top tissues by expression
223 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| left ventricle myocardium | UBERON:0006566 | 99.72 | gold quality |
| cardiac muscle of right atrium | UBERON:0003379 | 99.71 | gold quality |
| tibialis anterior | UBERON:0001385 | 98.63 | gold quality |
| deltoid | UBERON:0001476 | 98.62 | gold quality |
| vastus lateralis | UBERON:0001379 | 98.33 | gold quality |
| quadriceps femoris | UBERON:0001377 | 98.30 | gold quality |
| myocardium | UBERON:0002349 | 98.21 | gold quality |
| skeletal muscle tissue of rectus abdominis | UBERON:0004511 | 98.09 | gold quality |
| skeletal muscle tissue | UBERON:0001134 | 97.89 | gold quality |
| biceps brachii | UBERON:0001507 | 97.67 | gold quality |
| skeletal muscle tissue of biceps brachii | UBERON:0004502 | 97.65 | gold quality |
| heart right ventricle | UBERON:0002080 | 97.38 | gold quality |
| gastrocnemius | UBERON:0001388 | 96.31 | gold quality |
| hindlimb stylopod muscle | UBERON:0004252 | 96.28 | gold quality |
| body of tongue | UBERON:0011876 | 96.28 | gold quality |
| skeletal muscle organ | UBERON:0014892 | 95.27 | gold quality |
| cardiac ventricle | UBERON:0002082 | 94.99 | gold quality |
| heart left ventricle | UBERON:0002084 | 94.99 | gold quality |
| muscle of leg | UBERON:0001383 | 94.51 | gold quality |
| apex of heart | UBERON:0002098 | 94.19 | gold quality |
| cardiac atrium | UBERON:0002081 | 94.06 | gold quality |
| right atrium auricular region | UBERON:0006631 | 93.72 | gold quality |
| muscle tissue | UBERON:0002385 | 93.02 | gold quality |
| heart | UBERON:0000948 | 92.51 | gold quality |
| tongue | UBERON:0001723 | 86.91 | gold quality |
| vena cava | UBERON:0004087 | 86.32 | gold quality |
| right coronary artery | UBERON:0001625 | 80.12 | gold quality |
| male germ line stem cell (sensu Vertebrata) in testis | CL:0000089 ∩ UBERON:0000473 | 78.50 | gold quality |
| pancreatic ductal cell | CL:0002079 | 75.05 | silver quality |
| left coronary artery | UBERON:0001626 | 73.74 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 0.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | no | 4.03 |
Regulation
Is transcription factor: no
miRNA regulators (miRDB)
115 targeting UNC45B, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-5692B | 100.00 | 71.32 | 2622 |
| HSA-MIR-5692C | 100.00 | 71.32 | 2622 |
| HSA-MIR-4425 | 100.00 | 67.59 | 1049 |
| HSA-MIR-371B-5P | 99.99 | 75.34 | 4759 |
| HSA-MIR-186-5P | 99.99 | 70.83 | 3707 |
| HSA-MIR-196A-1-3P | 99.99 | 72.15 | 2772 |
| HSA-MIR-548N | 99.98 | 71.94 | 4170 |
| HSA-MIR-373-5P | 99.98 | 75.36 | 4753 |
| HSA-MIR-616-5P | 99.98 | 75.58 | 4775 |
| HSA-MIR-548AN | 99.97 | 70.91 | 2817 |
| HSA-MIR-3148 | 99.97 | 75.06 | 6478 |
| HSA-MIR-128-3P | 99.95 | 71.17 | 2484 |
| HSA-MIR-216A-3P | 99.95 | 71.19 | 2505 |
| HSA-MIR-539-5P | 99.93 | 70.30 | 2855 |
| HSA-MIR-3686 | 99.90 | 70.53 | 2432 |
| HSA-MIR-95-5P | 99.89 | 72.17 | 3973 |
| HSA-MIR-3681-3P | 99.88 | 70.46 | 2254 |
| HSA-MIR-659-3P | 99.85 | 70.69 | 1620 |
| HSA-MIR-548AR-3P | 99.85 | 71.26 | 3889 |
| HSA-MIR-576-5P | 99.84 | 70.46 | 2582 |
| HSA-MIR-3133 | 99.81 | 70.92 | 3506 |
| HSA-MIR-6739-5P | 99.80 | 67.87 | 2806 |
| HSA-MIR-6842-5P | 99.80 | 67.54 | 1587 |
| HSA-MIR-7110-5P | 99.80 | 67.84 | 1712 |
| HSA-MIR-4668-5P | 99.79 | 70.58 | 3782 |
| HSA-MIR-6733-5P | 99.74 | 67.94 | 2759 |
| HSA-MIR-4719 | 99.73 | 72.10 | 3329 |
| HSA-MIR-4524A-3P | 99.72 | 66.85 | 2406 |
| HSA-MIR-4422 | 99.72 | 72.07 | 2908 |
Literature-anchored findings (GeneRIF, showing 4)
- We have characterized a human UNC45B mutation in a Danish family with autosomal dominant cataract developing in early childhood. (PMID:24549050)
- temperature-dependent structural changes in the UCS chaperone domain of UNC-45B that occur within a physiologically relevant heat-shock range. (PMID:25436418)
- Pathogenic Variants in the Myosin Chaperone UNC-45B Cause Progressive Myopathy with Eccentric Cores. (PMID:33217308)
- Cardiac myofibrillogenesis is spatiotemporally modulated by the molecular chaperone UNC45B. (PMID:37295424)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | unc45b | ENSDARG00000008433 |
| mus_musculus | Unc45b | ENSMUSG00000018845 |
| rattus_norvegicus | Unc45b | ENSRNOG00000009466 |
| drosophila_melanogaster | unc-45 | FBGN0288846 |
| caenorhabditis_elegans | WBGENE00006781 |
Paralogs (18): RPAP3 (ENSG00000005175), TOMM34 (ENSG00000025772), ST13 (ENSG00000100380), STUB1 (ENSG00000103266), SPAG1 (ENSG00000104450), SGTA (ENSG00000104969), TTC1 (ENSG00000113312), TTC31 (ENSG00000115282), UNC45A (ENSG00000140553), SPATA16 (ENSG00000144962), TTC12 (ENSG00000149292), TOMM70 (ENSG00000154174), SUGT1 (ENSG00000165416), STIP1 (ENSG00000168439), TTC32 (ENSG00000183891), SGTB (ENSG00000197860), TTC4 (ENSG00000243725), DNAAF4 (ENSG00000256061)
Protein
Protein identifiers
Protein unc-45 homolog B — Q8IWX7 (reviewed: Q8IWX7)
Alternative names: SMUNC45
All UniProt accessions (1): Q8IWX7
UniProt curated annotations — full annotation on UniProt →
Function. Acts as a co-chaperone for HSP90 and is required for proper folding of the myosin motor domain. Plays a role in sarcomere formation during muscle cell development. Is necessary for normal early lens development.
Subunit / interactions. Interacts with HSP90 in an ATP-independent manner. Interacts with UBE4B; the interaction may target UNC45B for proteasomal degradation.
Subcellular location. Cytoplasm. Myofibril. Sarcomere. Z line. A band. Perinuclear region. Cytosol.
Tissue specificity. Expressed in eye lens tissues. Expressed in muscle (at protein level).
Disease relevance. Cataract 43 (CTRCT43) [MIM:616279] An opacification of the crystalline lens of the eye that frequently results in visual impairment or blindness. Opacities vary in morphology, are often confined to a portion of the lens, and may be static or progressive. In general, the more posteriorly located and dense an opacity, the greater the impact on visual function. The disease is caused by variants affecting the gene represented in this entry. Myopathy, myofibrillar, 11 (MFM11) [MIM:619178] A form of myofibrillar myopathy, a group of chronic neuromuscular disorders characterized at ultrastructural level by disintegration of the sarcomeric Z disk and myofibrils, and replacement of the normal myofibrillar markings by small dense granules, or larger hyaline masses, or amorphous material. MFM11 is an autosomal recessive form characterized by onset of slowly progressive proximal muscle weakness in the first decade of life. More variable features may include decreased respiratory forced vital capacity, variable cardiac features, and calf hypertrophy. Skeletal muscle biopsy shows myopathic changes with variation in fiber size, type 1 fiber predominance, centralized nuclei, eccentrically placed core-like lesions, and distortion of the myofibrillary pattern with Z-line streaming and abnormal myofibrillar aggregates or inclusions. The disease is caused by variants affecting the gene represented in this entry.
Isoforms (3)
| UniProt ID | Names | Canonical? |
|---|---|---|
| Q8IWX7-1 | 1 | yes |
| Q8IWX7-2 | 2 | |
| Q8IWX7-3 | 3 |
RefSeq proteins (4): NP_001028748, NP_001253981, NP_001295210, NP_775259 (=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000225 | Armadillo | Repeat |
| IPR011989 | ARM-like | Homologous_superfamily |
| IPR011990 | TPR-like_helical_dom_sf | Homologous_superfamily |
| IPR016024 | ARM-type_fold | Homologous_superfamily |
| IPR019734 | TPR_rpt | Repeat |
| IPR024660 | UCS_central_dom | Domain |
Pfam: PF11701
UniProt features (18 total): sequence variant 9, repeat 6, splice variant 2, chain 1
Structure
Experimental structures (PDB)
0 structures.
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q8IWX7-F1 | 88.38 | 0.59 |
Function
Pathways and Gene Ontology
Reactome pathways
0 pathways
MSigDB gene sets: 134 (showing top):
GSE18804_SPLEEN_MACROPHAGE_VS_COLON_TUMORAL_MACROPHAGE_DN, MYOGENIN_Q6, GCANCTGNY_MYOD_Q6, GGGTGGRR_PAX4_03, CAGCTG_AP4_Q5, GOBP_PROTEIN_MATURATION, SRF_C, GOBP_MUSCLE_STRUCTURE_DEVELOPMENT, GOBP_PROTEIN_FOLDING, ATGCTGG_MIR338, MYOD_Q6, E12_Q6, GOBP_SENSORY_ORGAN_DEVELOPMENT, TTCNRGNNNNTTC_HSF_Q6, GOBP_LENS_DEVELOPMENT_IN_CAMERA_TYPE_EYE
GO Biological Process (4): lens development in camera-type eye (GO:0002088), protein folding (GO:0006457), muscle organ development (GO:0007517), cell differentiation (GO:0030154)
GO Molecular Function (2): Hsp90 protein binding (GO:0051879), protein binding (GO:0005515)
GO Cellular Component (5): cytoplasm (GO:0005737), cytosol (GO:0005829), Z disc (GO:0030018), A band (GO:0031672), perinuclear region of cytoplasm (GO:0048471)
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 5 |
| cytoplasm | 2 |
| camera-type eye development | 1 |
| anatomical structure development | 1 |
| cellular process | 1 |
| protein maturation | 1 |
| animal organ development | 1 |
| muscle structure development | 1 |
| cellular developmental process | 1 |
| heat shock protein binding | 1 |
| binding | 1 |
| intracellular anatomical structure | 1 |
| I band | 1 |
| sarcomere | 1 |
Protein interactions and networks
STRING
1220 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| UNC45B | HSP90AA1 | P07900 | 940 |
| UNC45B | HSP90AB1 | P08238 | 826 |
| UNC45B | AHSA1 | O95433 | 703 |
| UNC45B | UBE4A | Q14139 | 688 |
| UNC45B | UBE4B | O95155 | 670 |
| UNC45B | HSPA4 | P34932 | 669 |
| UNC45B | MYH1 | P12882 | 654 |
| UNC45B | SMC5 | Q8IY18 | 599 |
| UNC45B | OR1E1 | P30953 | 596 |
| UNC45B | BAG3 | O95817 | 585 |
| UNC45B | SPATA18 | Q8TC71 | 541 |
| UNC45B | SPINK14 | Q6IE38 | 515 |
| UNC45B | FKBP4 | Q02790 | 512 |
| UNC45B | PGR | P06401 | 509 |
| UNC45B | SMYD1 | Q8NB12 | 500 |
IntAct
26 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| RINT1 | NBAS | psi-mi:“MI:0914”(association) | 0.830 |
| C1D | ZFC3H1 | psi-mi:“MI:0914”(association) | 0.640 |
| UNC45B | HSP90AB1 | psi-mi:“MI:0915”(physical association) | 0.620 |
| PWP2 | FBL | psi-mi:“MI:0914”(association) | 0.610 |
| UNC45B | HSP90AA1 | psi-mi:“MI:0914”(association) | 0.560 |
| IPO11 | BSG | psi-mi:“MI:0914”(association) | 0.560 |
| HSP90AA1 | UNC45B | psi-mi:“MI:0915”(physical association) | 0.560 |
| PSCA | ITGA6 | psi-mi:“MI:0914”(association) | 0.530 |
| APRT | UNC45B | psi-mi:“MI:0915”(physical association) | 0.400 |
| DHTKD1 | UNC45B | psi-mi:“MI:0915”(physical association) | 0.400 |
| ERBB2 | UNC45B | psi-mi:“MI:0915”(physical association) | 0.400 |
| PSMC2 | UNC45B | psi-mi:“MI:0915”(physical association) | 0.400 |
| UNC45B | HSPA2 | psi-mi:“MI:0915”(physical association) | 0.400 |
| HSP90AB1 | UNC45B | psi-mi:“MI:0915”(physical association) | 0.400 |
| UNC45B | CTCFL | psi-mi:“MI:0915”(physical association) | 0.400 |
| CFTR | UNC45B | psi-mi:“MI:0915”(physical association) | 0.370 |
| M | psi-mi:“MI:0914”(association) | 0.350 | |
| GRIA1 | GAPDHS | psi-mi:“MI:0914”(association) | 0.350 |
| BRD8 | YEATS4 | psi-mi:“MI:0914”(association) | 0.350 |
| OR5M8 | UBE3A | psi-mi:“MI:0914”(association) | 0.350 |
| MTFMT | UNC45B | psi-mi:“MI:0914”(association) | 0.350 |
| CLEC4G | UNC45B | psi-mi:“MI:0914”(association) | 0.350 |
| TLE1 | CKB | psi-mi:“MI:0914”(association) | 0.350 |
| UNC45B | EL52 | psi-mi:“MI:0914”(association) | 0.350 |
BioGRID (27): UNC45B (Affinity Capture-MS), HSP90AA5P (Affinity Capture-MS), UNC45B (Affinity Capture-MS), UNC45B (Affinity Capture-MS), UNC45B (Affinity Capture-MS), UNC45B (Affinity Capture-MS), UNC45B (Affinity Capture-MS), HSP90AB3P (Affinity Capture-MS), HSP90AA4P (Affinity Capture-MS), HSP90AA1 (Affinity Capture-MS), UNC45B (Affinity Capture-MS), UNC45B (Affinity Capture-MS), UNC45B (Affinity Capture-MS), HSP90AB1 (Affinity Capture-MS), HSP90AB4P (Affinity Capture-MS)
ESM2 similar proteins: A1Z6S7, A3LUY1, D7REX8, G5ED41, O14265, O44326, O60077, P21541, P29742, P34574, P38260, P40469, P41807, P46970, P51534, P53067, Q07395, Q22494, Q32PZ3, Q5RAP0, Q5ZI87, Q619W9, Q61A92, Q68F64, Q6BKV2, Q6CNM7, Q6CTY9, Q6DGE9, Q6FM01, Q75B89, Q75EM1, Q7K486, Q80XE1, Q80ZG0, Q8CGY6, Q8INF7, Q8IWX7, Q8MML6, Q95U54, Q99KD5
Diamond homologs: A2ZLU6, A4K2V0, A5PKG6, A6HD62, D3ZSP7, D7REX8, E4NKF8, E9Q735, F1RBN2, F8RP11, O13754, O13797, O14217, O16259, O35814, O54981, O80742, O81902, O88196, P0C6E7, P0CT30, P15705, P25638, P31948, P53041, P53042, P53804, Q07617, Q0IMG9, Q0JL44, Q14139, Q15785, Q32PZ3, Q388N2, Q3KRD5, Q3ZBR5, Q3ZBZ8, Q43468, Q496Y0, Q4R8N7
SIGNOR signaling
0 interactions.
Disease & clinical
Clinical variants and AI predictions
ClinVar
397 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 3 |
| Likely pathogenic | 3 |
| Uncertain significance | 213 |
| Likely benign | 92 |
| Benign | 70 |
Top pathogenic / likely-pathogenic (6)
| Variant ID | HGVS | Classification |
|---|---|---|
| 187851 | NM_001267052.2(UNC45B):c.2407C>T (p.Arg803Trp) | Pathogenic |
| 834072 | NM_001267052.2(UNC45B):c.2255G>A (p.Arg752Gln) | Pathogenic |
| 996756 | NM_001267052.2(UNC45B):c.1540T>C (p.Cys514Arg) | Pathogenic |
| 3731549 | NM_001267052.2(UNC45B):c.1486G>T (p.Asp496Tyr) | Likely pathogenic |
| 996754 | NM_001267052.2(UNC45B):c.2326C>T (p.Arg776Trp) | Likely pathogenic |
| 996755 | NM_001267052.2(UNC45B):c.2255+5G>C | Likely pathogenic |
SpliceAI
2550 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 17:35147911:G:GG | donor_gain | 1.0000 |
| 17:35148375:G:GT | donor_gain | 1.0000 |
| 17:35148404:G:GT | donor_gain | 1.0000 |
| 17:35150042:C:CA | acceptor_gain | 1.0000 |
| 17:35150044:ATAGC:A | acceptor_loss | 1.0000 |
| 17:35150046:A:AG | acceptor_gain | 1.0000 |
| 17:35150047:G:GT | acceptor_gain | 1.0000 |
| 17:35150047:GC:G | acceptor_gain | 1.0000 |
| 17:35150047:GCC:G | acceptor_gain | 1.0000 |
| 17:35150047:GCCA:G | acceptor_gain | 1.0000 |
| 17:35150047:GCCAT:G | acceptor_gain | 1.0000 |
| 17:35150219:AGAAG:A | donor_gain | 1.0000 |
| 17:35150220:GAAG:G | donor_gain | 1.0000 |
| 17:35150220:GAAGG:G | donor_gain | 1.0000 |
| 17:35150222:AG:A | donor_gain | 1.0000 |
| 17:35150222:AGGTG:A | donor_loss | 1.0000 |
| 17:35150223:GG:G | donor_gain | 1.0000 |
| 17:35150223:GGTG:G | donor_loss | 1.0000 |
| 17:35150224:G:C | donor_loss | 1.0000 |
| 17:35150224:G:GG | donor_gain | 1.0000 |
| 17:35152980:AAGG:A | donor_loss | 1.0000 |
| 17:35152981:AGG:A | donor_loss | 1.0000 |
| 17:35152982:GGTG:G | donor_loss | 1.0000 |
| 17:35152983:GT:G | donor_loss | 1.0000 |
| 17:35154569:TTCAG:T | acceptor_loss | 1.0000 |
| 17:35154572:A:AG | acceptor_gain | 1.0000 |
| 17:35154573:G:GG | acceptor_gain | 1.0000 |
| 17:35154737:CCAGA:C | donor_gain | 1.0000 |
| 17:35154738:CAGA:C | donor_gain | 1.0000 |
| 17:35154739:AGA:A | donor_gain | 1.0000 |
AlphaMissense
6075 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 17:35168231:C:A | A441D | 0.999 |
| 17:35168239:G:C | A444P | 0.999 |
| 17:35168243:T:C | L445P | 0.999 |
| 17:35168357:T:C | L483P | 0.999 |
| 17:35169837:G:A | G485R | 0.999 |
| 17:35169837:G:C | G485R | 0.999 |
| 17:35169841:T:C | L486P | 0.999 |
| 17:35169845:T:G | C487W | 0.999 |
| 17:35169848:G:C | K488N | 0.999 |
| 17:35169848:G:T | K488N | 0.999 |
| 17:35170154:T:A | W530R | 0.999 |
| 17:35170154:T:C | W530R | 0.999 |
| 17:35170166:G:C | G534R | 0.999 |
| 17:35170179:T:C | L538P | 0.999 |
| 17:35170201:G:C | K545N | 0.999 |
| 17:35170201:G:T | K545N | 0.999 |
| 17:35180639:C:A | A781D | 0.999 |
| 17:35154587:T:C | L162P | 0.998 |
| 17:35168147:G:A | G413D | 0.998 |
| 17:35168251:G:C | A448P | 0.998 |
| 17:35168252:C:A | A448D | 0.998 |
| 17:35168306:T:C | L466P | 0.998 |
| 17:35169838:G:A | G485E | 0.998 |
| 17:35169843:T:C | C487R | 0.998 |
| 17:35169844:G:A | C487Y | 0.998 |
| 17:35169850:T:C | L489P | 0.998 |
| 17:35169913:T:C | L510P | 0.998 |
| 17:35169915:G:C | A511P | 0.998 |
| 17:35169928:G:C | R515P | 0.998 |
| 17:35170115:T:A | W517R | 0.998 |
dbSNP variants (sampled 300 via entrez): RS1000047819 (17:35169732 A>C,T), RS1000126749 (17:35163766 A>G), RS1000192905 (17:35164972 G>A), RS1000203095 (17:35180312 G>A), RS1000241827 (17:35157817 A>T), RS1000311654 (17:35186273 T>A,C), RS1000317275 (17:35174682 C>T), RS1000410984 (17:35155751 G>A), RS1000486545 (17:35180603 A>G), RS1000547019 (17:35178920 C>A,T), RS1000557063 (17:35174631 G>A), RS1000788137 (17:35169203 C>G,T), RS1000903419 (17:35157912 G>C), RS1000970017 (17:35146465 G>A), RS1001045060 (17:35184778 C>A,T)
Disease associations
OMIM: gene MIM:611220 | disease phenotypes: MIM:616279, MIM:619178, MIM:115200
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| myofibrillar myopathy 11 | Strong | Autosomal recessive |
| cataract 43 | Strong | Autosomal dominant |
| early-onset posterior subcapsular cataract | Supportive | Autosomal dominant |
| early-onset nuclear cataract | Supportive | Autosomal dominant |
Mondo (6): cataract 43 (MONDO:0014565), myofibrillar myopathy 11 (MONDO:0030927), dilated cardiomyopathy 1A (MONDO:0007269), myopathy (MONDO:0005336), early-onset posterior subcapsular cataract (MONDO:0018610), early-onset nuclear cataract (MONDO:0020376)
Orphanet (2): Early onset non-syndromic cataract (Orphanet:91492), Familial dilated cardiomyopathy with conduction defect due to LMNA mutation (Orphanet:300751)
HPO phenotypes
25 total (25 of 25 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0001558 | Decreased fetal movement |
| HP:0001611 | Hypernasal speech |
| HP:0001680 | Coarctation of aorta |
| HP:0002015 | Dysphagia |
| HP:0003327 | Axial muscle weakness |
| HP:0003391 | Gowers sign |
| HP:0003458 | EMG: myopathic abnormalities |
| HP:0003557 | Increased variability in muscle fiber diameter |
| HP:0003577 | Congenital onset |
| HP:0003593 | Infantile onset |
| HP:0003687 | Centrally nucleated skeletal muscle fibers |
| HP:0003700 | Generalized amyotrophy |
| HP:0003701 | Proximal muscle weakness |
| HP:0003724 | Shoulder girdle muscle atrophy |
| HP:0003803 | Type 1 muscle fiber predominance |
| HP:0007787 | Posterior subcapsular cataract |
| HP:0008872 | Feeding difficulties in infancy |
| HP:0008981 | Calf muscle hypertrophy |
| HP:0011463 | Childhood onset |
| HP:0012378 | Fatigue |
| HP:0020203 | Z-band streaming |
| HP:0025502 | Overweight |
| HP:0032341 | Reduced forced vital capacity |
| HP:0034635 | Muscle fiber granulofilamentous inclusion bodies |
GWAS associations
1 associations (top):
| Study | Trait | p-value |
|---|---|---|
| GCST006493_6 | Systemic sclerosis | 4.000000e-06 |
MeSH disease descriptors (1)
| Descriptor | Name | Tree numbers |
|---|---|---|
| C563333 | Cataract, Age-Related Nuclear (supp.) |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: no
PharmGKB: 1 entry (VIP=true, CPIC=false)
CTD chemical–gene interactions
15 total (human), top 15 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| triphenyl phosphate | affects expression | 1 |
| bisphenol A | increases expression | 1 |
| aflatoxin B2 | increases methylation | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| incobotulinumtoxinA | decreases expression | 1 |
| Acetaminophen | decreases expression | 1 |
| Benzo(a)pyrene | affects methylation, increases methylation | 1 |
| Benztropine | affects cotreatment, decreases expression | 1 |
| Clozapine | increases expression | 1 |
| Cuprizone | decreases expression, affects cotreatment | 1 |
| Doxorubicin | increases expression | 1 |
| Triclosan | decreases expression | 1 |
| Cyclosporine | decreases methylation | 1 |
| Aflatoxin B1 | increases expression | 1 |
| Asbestos, Serpentine | decreases methylation | 1 |
Clinical trials (associated diseases)
47 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT00120055 | PHASE4 | COMPLETED | Association Between Systemic Exposure of Atorvastatin and Metabolites and Atorvastatin-induced Myotoxicity |
| NCT03633565 | PHASE4 | UNKNOWN | Comparative Study of Strategies for Management of Duchenne Myopathy (DM) |
| NCT01225614 | PHASE3 | UNKNOWN | Efficacy and Tolerance of Early Launching of Nocturnal Non Invasive |
| NCT00278564 | PHASE1 | TERMINATED | Stem Cell Transplantation in Idiopathic Inflammatory Myopathy Diseases |
| NCT05394506 | Not specified | RECRUITING | Modifying Factors in Striated Muscle Laminopathies |
| NCT01642056 | PHASE1/PHASE2 | COMPLETED | EPI-743 for Metabolism or Mitochondrial Disorders |
| NCT02124070 | PHASE1/PHASE2 | WITHDRAWN | Therapeutic Effect of Recombinant Human Growth Hormone (rhGH) on the Myopathy of Cystinosis |
| NCT00549029 | Not specified | UNKNOWN | The Association of Genetic Polymorphisms With Statin-Induced Myopathy. |
| NCT00767130 | Not specified | UNKNOWN | DNA Diagnostic System for Statin Safety and Efficacy |
| NCT00922428 | Not specified | COMPLETED | PASCOE-Agil HOM-Injektopas in the Treatment of Rheumatic Disorders |
| NCT00937001 | Not specified | ACTIVE_NOT_RECRUITING | Critical Illness Myopathy as a Cause of Debilitating ICU-Acquired Weakness |
| NCT00990834 | Not specified | WITHDRAWN | Muscle Characteristics Associated With Statin Therapy |
| NCT01022450 | Not specified | UNKNOWN | Study of the Causes of the Breakdown of Muscle Fibers in Hospitalized Patients |
| NCT01040650 | Not specified | TERMINATED | Metabolic Features of Post-Myopathy Patients Associated With Statin Treatment |
| NCT01047163 | Not specified | COMPLETED | Maintenance of Muscle Mass in Older People: the Negative Impact of Statin Therapy |
| NCT01270269 | Not specified | COMPLETED | ACT-ICU Study: Activity and Cognitive Therapy in the Intensive Care Unit |
| NCT01353430 | Not specified | RECRUITING | Characterization of Inclusion Body Myopathy Associated With Paget’s Disease of Bone and Frontotemporal Dementia (IBMPFD) |
| NCT01395563 | Not specified | WITHDRAWN | Strength Training on Pancreatic Cancer |
| NCT01530841 | Not specified | COMPLETED | Efficacy and Tolerance of AVAPS Mode in Myotonic Dystrophy |
| NCT01547767 | Not specified | COMPLETED | Investigations Into ISCU Myopathy or Iron Sulfur Scaffold U Protein Myopathy |
| NCT01702987 | Not specified | COMPLETED | Evaluation of Ubiquinol on Mitochondrial Oxidative Capacity in Statin Patients Using 31PMRS |
| NCT01790178 | Not specified | COMPLETED | Ultrasound in Muscle Biopsy |
| NCT02011282 | Not specified | COMPLETED | Electro-Neuro-Muscular Stimulation in ICU |
| NCT02104921 | Not specified | COMPLETED | Innovative Ultrasound Technology in Neuromuscular Disease |
| NCT02118805 | Not specified | COMPLETED | Innovative Measures of Speech and Swallowing Dysfunction in Neurological Disorders |
| NCT02235220 | Not specified | UNKNOWN | Reduction of Masticatory Muscle Activity by Restoring Canine Guidance |
| NCT02247895 | Not specified | TERMINATED | Treatment of Muscle Weakness in Critically Ill Patients |
| NCT02315339 | Not specified | TERMINATED | European Home Mechanical Ventilation Registry |
| NCT02442986 | Not specified | COMPLETED | Neurological Outcome in Surgical and Non-surgical Septic Patients |
| NCT02706314 | Not specified | COMPLETED | Impact of Human Blood Serum From Critically Ill Patients on Human Colon Neuronal Networks. |
| NCT02765828 | Not specified | COMPLETED | Identification of Tongue Involvement in Late-Onset Pompe Disease |
| NCT03042286 | Not specified | UNKNOWN | SAPhIRE Statin Adverse Drug Reaction |
| NCT03141749 | Not specified | COMPLETED | Venous Thromboembolism in DM1 |
| NCT03660969 | Not specified | ACTIVE_NOT_RECRUITING | Reliability of Cardiac Troponins for the Diagnosis of Myocardial Infarction in the Presence of Skeletal Muscle Disease |
| NCT03749538 | Not specified | RECRUITING | Acute Transcranial Direct Current Stimulation in Patients With Systemic Autoimmune Myopathies |
| NCT03751644 | Not specified | COMPLETED | Peripherical Neuromuscular Electrical Stimulation in Systemic Autoimmune Myopathies |
| NCT03998540 | Not specified | UNKNOWN | Improvement of DIAgnostic and Phenotype-genotype Correlation Studies in Patients With MYOpathy Suspected of TITinopathy |
| NCT04678635 | Not specified | RECRUITING | Chronic Transcranial Direct Current Stimulation in Patients With Systemic Autoimmune Myopathies |
| NCT04881214 | Not specified | UNKNOWN | COVID-19 Pneumonia: Pulmonary Physiology, Health-related Quality of Life and Benefit of a Rehabilitation Program |
| NCT04941079 | Not specified | UNKNOWN | Safety and Efficacy of Inactivated SARS-CoV-2 Vaccine in Immune-related Myopathy (Myasthenia Gravis and Inflammatory Myopathy) Patients :a Prospective Observational Study |
Related Atlas pages
- Associated diseases: myofibrillar myopathy 11, cataract 43, early-onset posterior subcapsular cataract, early-onset nuclear cataract
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): cataract 43, dilated cardiomyopathy 1A, early-onset nuclear cataract, early-onset posterior subcapsular cataract, myofibrillar myopathy 11, myopathy, systemic sclerosis