UQCRFS1-DT

Summary

UQCRFS1-DT (UQCRFS1 divergent transcript, HGNC:55295) is a long non-coding RNA gene on chromosome 19q12.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55295
Approved symbol	UQCRFS1-DT
Name	UQCRFS1 divergent transcript
Location	19q12
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000267498
Ensembl biotype	lncRNA
Entrez	105372352
RNAcentral	URS00026A249A — lncRNA, 717 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 13 — 13 lncRNA

ENST00000587859, ENST00000590607, ENST00000618791, ENST00000716163, ENST00000741481, ENST00000741482, ENST00000741483, ENST00000741484, ENST00000741485, ENST00000741486, ENST00000741487, ENST00000741488, ENST00000741489

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000587859 — 2 exons

Exon	Start	End
ENSE00004078724	29213208	29213408
ENSE00004078738	29215281	29215886

Expression profiles

Bgee: expression breadth ubiquitous, 129 present calls, max score 76.77.

FANTOM5 (CAGE): breadth tissue_specific, TPM avg 0.1189 / max 5.8313, expressed in 60 samples.

FANTOM5 promoters (1 alternative TSS)

Promoter ID	TPM avg	Samples expressed
174993	0.1189	60

Top tissues by expression

129 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	76.77	silver quality
bone marrow cell	CL:0002092	71.58	gold quality
C1 segment of cervical spinal cord	UBERON:0006469	68.89	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	68.30	gold quality
substantia nigra	UBERON:0002038	67.70	gold quality
ganglionic eminence	UBERON:0004023	66.36	gold quality
left testis	UBERON:0004533	66.33	gold quality
testis	UBERON:0000473	66.31	gold quality
putamen	UBERON:0001874	66.11	gold quality
amygdala	UBERON:0001876	65.76	gold quality
temporal lobe	UBERON:0001871	65.61	gold quality
right testis	UBERON:0004534	65.20	gold quality
ventricular zone	UBERON:0003053	64.90	gold quality
prefrontal cortex	UBERON:0000451	64.31	gold quality
Ammon’s horn	UBERON:0001954	64.23	gold quality
caudate nucleus	UBERON:0001873	63.59	gold quality
nucleus accumbens	UBERON:0001882	63.14	gold quality
frontal cortex	UBERON:0001870	62.37	gold quality
skeletal muscle tissue	UBERON:0001134	62.33	gold quality
cerebral cortex	UBERON:0000956	62.20	gold quality
hypothalamus	UBERON:0001898	62.06	gold quality
anterior cingulate cortex	UBERON:0009835	61.58	gold quality
right uterine tube	UBERON:0001302	61.30	gold quality
right adrenal gland cortex	UBERON:0035827	61.25	gold quality
dorsolateral prefrontal cortex	UBERON:0009834	61.16	gold quality
brain	UBERON:0000955	60.60	gold quality
cortical plate	UBERON:0005343	60.58	gold quality
left adrenal gland cortex	UBERON:0035825	60.56	gold quality
primary visual cortex	UBERON:0002436	60.27	gold quality
Brodmann (1909) area 9	UBERON:0013540	60.16	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	1.27

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.