USP12-AS1

Summary

USP12-AS1 (USP12 antisense RNA 1, HGNC:39961) is a long non-coding RNA gene on chromosome 13q12.13.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:39961
Approved symbol	USP12-AS1
Name	USP12 antisense RNA 1
Location	13q12.13
Locus type	RNA, long non-coding
Status	Approved
Aliases	USP12-AS2
Ensembl gene	ENSG00000232162
Ensembl biotype	lncRNA
Entrez	100874070
RNAcentral	URS00007599D1 — lncRNA, 307 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 5 — 5 lncRNA

ENST00000440657, ENST00000452222, ENST00000715723, ENST00000840637, ENST00000840638

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000440657 — 2 exons

Exon	Start	End
ENSE00004027702	27162855	27162923
ENSE00004027703	27168937	27169135

Expression profiles

Bgee: expression breadth broad, 100 present calls, max score 89.05.

Top tissues by expression

100 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	89.05	gold quality
corpus callosum	UBERON:0002336	85.23	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	83.49	gold quality
bone marrow cell	CL:0002092	79.93	gold quality
colonic epithelium	UBERON:0000397	78.31	gold quality
calcaneal tendon	UBERON:0003701	75.70	gold quality
sural nerve	UBERON:0015488	75.69	gold quality
liver	UBERON:0002107	74.49	gold quality
bone marrow	UBERON:0002371	72.51	gold quality
muscle tissue	UBERON:0002385	71.62	gold quality
monocyte	CL:0000576	69.34	gold quality
prefrontal cortex	UBERON:0000451	68.91	gold quality
adrenal tissue	UBERON:0018303	68.87	gold quality
skeletal muscle tissue	UBERON:0001134	66.91	gold quality
blood	UBERON:0000178	66.69	gold quality
muscle of leg	UBERON:0001383	66.04	gold quality
hindlimb stylopod muscle	UBERON:0004252	65.56	gold quality
tonsil	UBERON:0002372	65.31	gold quality
islet of Langerhans	UBERON:0000006	64.97	gold quality
adrenal gland	UBERON:0002369	64.88	gold quality
stomach	UBERON:0000945	63.94	gold quality
primary visual cortex	UBERON:0002436	62.74	gold quality
gall bladder	UBERON:0002110	62.24	gold quality
placenta	UBERON:0001987	61.47	gold quality
urinary bladder	UBERON:0001255	60.78	silver quality
kidney	UBERON:0002113	60.43	gold quality
endometrium	UBERON:0001295	59.31	gold quality
left adrenal gland cortex	UBERON:0035825	58.86	gold quality
right lobe of liver	UBERON:0001114	58.72	gold quality
adult mammalian kidney	UBERON:0000082	58.33	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.88

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.