USP34-DT

Summary

USP34-DT (USP34 divergent transcript, HGNC:55262) is a long non-coding RNA gene on chromosome 2p15.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:55262
Approved symbol	USP34-DT
Name	USP34 divergent transcript
Location	2p15
Locus type	RNA, long non-coding
Status	Approved
Aliases	AC016727.1
Ensembl gene	ENSG00000270820
Ensembl biotype	lncRNA
Entrez	105377633
RNAcentral	URS00026A1DE5 — lncRNA, 1858 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 58 — 58 lncRNA

ENST00000578974, ENST00000603028, ENST00000603199, ENST00000603652, ENST00000605437, ENST00000664869, ENST00000692738, ENST00000702649, ENST00000703027, ENST00000805155, ENST00000805156, ENST00000805157, ENST00000805158, ENST00000805159, ENST00000805160, ENST00000805161, ENST00000805162, ENST00000805163, ENST00000805164, ENST00000805165, ENST00000805166, ENST00000805167, ENST00000805168, ENST00000805169, ENST00000805170, ENST00000805171, ENST00000805172, ENST00000805173, ENST00000805174, ENST00000805175, ENST00000805176, ENST00000805177, ENST00000805178, ENST00000805179, ENST00000805180, ENST00000805181, ENST00000805182, ENST00000805183, ENST00000805184, ENST00000805185, ENST00000805186, ENST00000805187, ENST00000805188, ENST00000805189, ENST00000805190, ENST00000805191, ENST00000805192, ENST00000805193, ENST00000805194, ENST00000805195, ENST00000805196, ENST00000805197, ENST00000805198, ENST00000805199, ENST00000805200, ENST00000805201, ENST00000805202, ENST00000805203

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000578974 — 4 exons

Exon	Start	End
ENSE00003467745	61471749	61471808
ENSE00003554569	61482627	61482736
ENSE00003616933	61483906	61484130
ENSE00003987757	61471369	61471479

Expression profiles

Bgee: expression breadth ubiquitous, 189 present calls, max score 86.19.

Top tissues by expression

241 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	86.19	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	84.90	gold quality
colonic epithelium	UBERON:0000397	80.24	gold quality
cortical plate	UBERON:0005343	79.77	gold quality
pituitary gland	UBERON:0000007	79.22	gold quality
adenohypophysis	UBERON:0002196	79.03	gold quality
right uterine tube	UBERON:0001302	78.96	gold quality
right lobe of thyroid gland	UBERON:0001119	78.47	gold quality
right testis	UBERON:0004534	78.05	gold quality
mucosa of transverse colon	UBERON:0004991	78.00	gold quality
monocyte	CL:0000576	77.99	gold quality
leukocyte	CL:0000738	77.95	gold quality
lower esophagus mucosa	UBERON:0035834	77.76	gold quality
left testis	UBERON:0004533	77.50	gold quality
hindlimb stylopod muscle	UBERON:0004252	77.37	gold quality
thyroid gland	UBERON:0002046	77.17	gold quality
right lobe of liver	UBERON:0001114	77.01	gold quality
body of pancreas	UBERON:0001150	77.00	gold quality
left lobe of thyroid gland	UBERON:0001120	76.89	gold quality
left ovary	UBERON:0002119	76.22	gold quality
oviduct epithelium	UBERON:0004804	76.21	gold quality
nucleus accumbens	UBERON:0001882	76.15	gold quality
testis	UBERON:0000473	76.04	gold quality
right adrenal gland	UBERON:0001233	75.99	gold quality
caudate nucleus	UBERON:0001873	75.76	gold quality
epithelial cell of pancreas	CL:0000083	75.51	gold quality
pancreas	UBERON:0001264	75.43	gold quality
right coronary artery	UBERON:0001625	75.19	gold quality
right adrenal gland cortex	UBERON:0035827	74.78	gold quality
islet of Langerhans	UBERON:0000006	74.74	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 0.

Experiment	Marker?	Max mean expression
E-ANND-3	no	2.93

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.