VIPR1-AS1

Summary

VIPR1-AS1 (VIPR1 antisense RNA 1, HGNC:40610) is a long non-coding RNA gene on chromosome 3p22.1.

At a glance

• Gene type: non-coding (lncRNA) — no protein product; not a drug target. Variant/disease associations are omitted (they would be positional, from an overlapping protein-coding gene).

Identifiers

Gene identifiers

Field	Value
HGNC ID	HGNC:40610
Approved symbol	VIPR1-AS1
Name	VIPR1 antisense RNA 1
Location	3p22.1
Locus type	RNA, long non-coding
Status	Approved
Ensembl gene	ENSG00000232354
Ensembl biotype	lncRNA
Entrez	100874007
RNAcentral	URS000075EA16 — lncRNA, 181 nt, 1 organism(s)

Gene structure

Transcript identifiers

Ensembl transcripts: 36 — 36 lncRNA

ENST00000452639, ENST00000593611, ENST00000593621, ENST00000596630, ENST00000598837, ENST00000600342, ENST00000601312, ENST00000602176, ENST00000608869, ENST00000610022, ENST00000625304, ENST00000625717, ENST00000625950, ENST00000626097, ENST00000626193, ENST00000626234, ENST00000626268, ENST00000626317, ENST00000626444, ENST00000626936, ENST00000626992, ENST00000627014, ENST00000627073, ENST00000627080, ENST00000627914, ENST00000628141, ENST00000628210, ENST00000628222, ENST00000628282, ENST00000628996, ENST00000629306, ENST00000629337, ENST00000630253, ENST00000630335, ENST00000630614, ENST00000631311

RefSeq mRNA: 0 — MANE Select: None

Canonical transcript exons

ENST00000452639 — 7 exons

Exon	Start	End
ENSE00001734481	42532021	42532095
ENSE00001736928	42530860	42530958
ENSE00003094908	42516782	42516836
ENSE00003120570	42512058	42512292
ENSE00003146585	42528549	42528658
ENSE00003153713	42506650	42506842
ENSE00003706258	42532564	42533231

Expression profiles

Bgee: expression breadth ubiquitous, 132 present calls, max score 98.06.

Top tissues by expression

132 total, by Bgee expression score (0-100, higher = more expressed):

Tissue	Anatomy ID	Expression score	Quality
right lung	UBERON:0002167	98.06	gold quality
upper lobe of left lung	UBERON:0008952	90.06	gold quality
rectum	UBERON:0001052	86.90	gold quality
lung	UBERON:0002048	86.46	gold quality
duodenum	UBERON:0002114	86.21	gold quality
colonic epithelium	UBERON:0000397	85.11	gold quality
skin of leg	UBERON:0001511	84.70	gold quality
mucosa of transverse colon	UBERON:0004991	84.53	gold quality
zone of skin	UBERON:0000014	84.36	gold quality
skin of abdomen	UBERON:0001416	83.82	gold quality
male germ line stem cell (sensu Vertebrata) in testis	CL:0000089 ∩ UBERON:0000473	83.68	gold quality
right hemisphere of cerebellum	UBERON:0014890	83.59	gold quality
transverse colon	UBERON:0001157	83.35	gold quality
minor salivary gland	UBERON:0001830	83.05	gold quality
cerebellar hemisphere	UBERON:0002245	82.66	gold quality
cerebellar cortex	UBERON:0002129	82.55	gold quality
cerebellum	UBERON:0002037	82.48	gold quality
saliva-secreting gland	UBERON:0001044	82.46	gold quality
small intestine	UBERON:0002108	81.32	gold quality
small intestine Peyer’s patch	UBERON:0003454	81.17	gold quality
prostate gland	UBERON:0002367	79.37	gold quality
monocyte	CL:0000576	79.13	gold quality
granulocyte	CL:0000094	78.59	gold quality
leukocyte	CL:0000738	78.52	gold quality
superior frontal gyrus	UBERON:0002661	78.32	gold quality
thoracic mammary gland	UBERON:0005200	77.74	gold quality
primordial germ cell in gonad	CL:0000670 ∩ UBERON:0000991	77.22	gold quality
subcutaneous adipose tissue	UBERON:0002190	77.14	gold quality
primary visual cortex	UBERON:0002436	76.74	gold quality
blood	UBERON:0000178	76.41	gold quality

Single-cell (SCXA)

Detected in 1 experiment(s), a significant marker in 1.

Experiment	Marker?	Max mean expression
E-ANND-3	yes	3.90

Regulation

Is transcription factor: no

Cross-species orthologs

0 orthologs

Protein

Non-coding RNA — no protein product; not a drug target.

Function

No curated pathway, Gene-Ontology, or interaction data.

Disease & clinical

No curated disease, variant, or cancer-driver associations.

Drugs & pharmacology

No drug or pharmacology data — not an established drug target.