VIPR1
gene geneOn this page
Also known as VPAC1RDC1HVR1VPAC1R
Summary
VIPR1 (vasoactive intestinal peptide receptor 1, HGNC:12694) is a protein-coding gene on chromosome 3p22.1, encoding Vasoactive intestinal polypeptide receptor 1 (P32241). G protein-coupled receptor activated by the neuropeptides vasoactive intestinal peptide (VIP) and pituitary adenylate cyclase-activating polypeptide (ADCYAP1/PACAP).
This gene encodes a receptor for vasoactive intestinal peptide, a small neuropeptide. Vasoactive intestinal peptide is involved in smooth muscle relaxation, exocrine and endocrine secretion, and water and ion flux in lung and intestinal epithelia. Its actions are effected through integral membrane receptors associated with a guanine nucleotide binding protein which activates adenylate cyclase. Several transcript variants encoding different isoforms have been found for this gene.
Source: NCBI Gene 7433 — RefSeq curated summary.
At a glance
- GWAS associations: 4
- Clinical variants (ClinVar): 99 total
- GTEx eGene: eQTL in 23 tissues, sQTL in 6 (q < 0.05)
- ChEMBL bioactivity: 1 clinical-phase molecule tested; no curated mechanism-of-action drug
- Constraint (gnomAD): pLI 0.00 (LoF-tolerant), LOEUF 1.34 (unconstrained)
- MANE Select transcript:
NM_004624 - Notable: 99 clinical variants but no curated precision-oncology (CIViC) evidence yet
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:12694 |
| Approved symbol | VIPR1 |
| Name | vasoactive intestinal peptide receptor 1 |
| Location | 3p22.1 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | VPAC1, RDC1, HVR1, VPAC1R |
| Ensembl gene | ENSG00000114812 |
| Ensembl biotype | protein_coding |
| OMIM | 192321 |
| Entrez | 7433 |
Gene structure
Transcript identifiers
Ensembl transcripts: 60 — 27 nonsense_mediated_decay, 26 protein_coding, 4 protein_coding_CDS_not_defined, 3 retained_intron
MANE Select: ENST00000325123
Transcript support level (Ensembl TSL; 1 = fully mRNA-supported): TSL 1: 1, TSL 2: 4, TSL 3: 6, TSL 5: 4
ENST00000325123, ENST00000433647, ENST00000436487, ENST00000439731, ENST00000439910, ENST00000443646, ENST00000446673, ENST00000450274, ENST00000465338, ENST00000473495, ENST00000473575, ENST00000487545, ENST00000490161, ENST00000495189, ENST00000498102, ENST00000883016, ENST00000883017, ENST00000883018, ENST00000883019, ENST00000883020, ENST00000883021, ENST00000883022, ENST00000883023, ENST00000883024, ENST00000883025, ENST00000883026, ENST00000883027, ENST00000883028, ENST00000883029, ENST00000883030, ENST00000913982, ENST00000954072, ENST00000954073, ENST00001000200, ENST00001000201, ENST00001000202, ENST00001000204, ENST00001000205, ENST00001000207, ENST00001000208, ENST00001000209, ENST00001000211, ENST00001000212, ENST00001000213, ENST00001000214, ENST00001000215, ENST00001000216, ENST00001000217, ENST00001000218, ENST00001000219, ENST00001000220, ENST00001010207, ENST00001010208, ENST00001010209, ENST00001010210, ENST00001010211, ENST00001010212, ENST00001010213, ENST00001116627, ENST00001140260
RefSeq mRNA: 5 — MANE Select: NM_004624
NM_001251882, NM_001251883, NM_001251884, NM_001251885, NM_004624
CCDS: CCDS2698, CCDS58828
Canonical transcript exons
ENST00000325123 — 13 exons
| Exon | Start | End |
|---|---|---|
| ENSE00003460096 | 42519223 | 42519330 |
| ENSE00003464487 | 42535343 | 42535384 |
| ENSE00003488172 | 42530779 | 42530932 |
| ENSE00003505964 | 42531471 | 42531531 |
| ENSE00003516247 | 42527991 | 42528123 |
| ENSE00003521687 | 42531803 | 42531869 |
| ENSE00003527672 | 42534975 | 42535104 |
| ENSE00003586884 | 42513749 | 42513854 |
| ENSE00003601410 | 42532242 | 42532333 |
| ENSE00003663519 | 42525887 | 42525993 |
| ENSE00003790864 | 42527393 | 42527496 |
| ENSE00003842902 | 42536090 | 42537568 |
| ENSE00003843166 | 42502643 | 42502813 |
Expression profiles
Bgee: expression breadth ubiquitous, 214 present calls, max score 99.61.
FANTOM5 (CAGE): breadth broad, TPM avg 8.0133 / max 353.2848, expressed in 861 samples.
Highest expression (Bgee): lung, upper lobe of left lung, upper lobe of lung, mucosa of transverse colon, rectum.
Genetic regulation across tissues (GTEx eQTL / sQTL)
VIPR1 is an eGene in GTEx v10 — its expression is genetically regulated (eQTL) in 23 tissues and its splicing (sQTL) in 6 (q < 0.05). Strongest associations first; slope = normalized effect of the lead variant’s alternative allele.
showing 20 of 29 significant tissue × QTL associations:
| Tissue | QTL | q-value | Slope | Lead variant |
|---|---|---|---|---|
| Cells EBV-transformed lymphocytes | eqtl | 1.2e-14 | +0.66 | 3:42488258:C:T |
| Nerve Tibial | eqtl | 8.2e-08 | +0.19 | 3:42479492:A:G |
| Whole Blood | eqtl | 1.7e-07 | +0.21 | 3:42527208:C:G |
| Brain Frontal Cortex BA9 | eqtl | 3.2e-06 | -0.19 | 3:42500395:A:G |
| Skin Sun Exposed Lower leg | eqtl | 6.9e-06 | -0.14 | 3:42476887:G:A |
| Adipose Visceral Omentum | eqtl | 7.0e-05 | -0.41 | 3:42496688:G:T |
| Brain Cortex | eqtl | 1.0e-04 | +0.19 | 3:42480411:G:A |
| Skin Not Sun Exposed Suprapubic | eqtl | 1.3e-04 | -0.14 | 3:42476887:G:A |
| Skin Sun Exposed Lower leg | sqtl | 1.5e-04 | -0.41 | 3:42512934:A:C |
| Esophagus Muscularis | eqtl | 1.5e-04 | +0.19 | 3:42483694:G:C |
| Brain Cerebellum | sqtl | 2.9e-04 | -0.66 | 3:42527208:C:G |
| Esophagus Gastroesophageal Junction | eqtl | 4.6e-03 | +0.19 | 3:42475653:A:G |
| Brain Cerebellum | eqtl | 5.4e-03 | -0.58 | 3:42418384:C:CTA |
| Testis | eqtl | 5.7e-03 | +0.23 | 3:42337048:T:C |
| Muscle Skeletal | eqtl | 6.7e-03 | +0.16 | 3:42480257:G:A |
| Brain Substantia nigra | eqtl | 9.3e-03 | +0.33 | 3:42488258:C:T |
| Brain Anterior cingulate cortex BA24 | eqtl | 1.3e-02 | +0.22 | 3:42524661:G:A |
| Pancreas | eqtl | 1.5e-02 | +0.96 | 3:41555424:C:T |
| Adipose Subcutaneous | eqtl | 2.5e-02 | -0.46 | 3:42610946:A:G |
| Small Intestine Terminal Ileum | sqtl | 2.7e-02 | +2.80 | 3:43250817:C:T |
FANTOM5 promoters
1 alternative TSS:
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 36257 | 8.0133 | 861 |
Top tissues by expression
showing 100 of 289 tissues by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| right lung | UBERON:0002167 | 99.61 | gold quality |
| upper lobe of left lung | UBERON:0008952 | 97.34 | gold quality |
| upper lobe of lung | UBERON:0008948 | 97.04 | gold quality |
| mucosa of transverse colon | UBERON:0004991 | 95.38 | gold quality |
| rectum | UBERON:0001052 | 94.19 | gold quality |
| ileal mucosa | UBERON:0000331 | 93.76 | gold quality |
| skin of leg | UBERON:0001511 | 93.25 | gold quality |
| skin of abdomen | UBERON:0001416 | 92.60 | gold quality |
| duodenum | UBERON:0002114 | 92.37 | gold quality |
| right hemisphere of cerebellum | UBERON:0014890 | 92.15 | gold quality |
| lung | UBERON:0002048 | 91.53 | gold quality |
| minor salivary gland | UBERON:0001830 | 91.44 | gold quality |
| cerebellar hemisphere | UBERON:0002245 | 91.21 | gold quality |
| cerebellar cortex | UBERON:0002129 | 91.07 | gold quality |
| lower lobe of lung | UBERON:0008949 | 91.05 | silver quality |
| zone of skin | UBERON:0000014 | 90.78 | gold quality |
| transverse colon | UBERON:0001157 | 90.58 | gold quality |
| granulocyte | CL:0000094 | 89.56 | gold quality |
| small intestine Peyer’s patch | UBERON:0003454 | 89.43 | gold quality |
| right frontal lobe | UBERON:0002810 | 89.42 | gold quality |
| jejunal mucosa | UBERON:0000399 | 89.30 | gold quality |
| cerebellum | UBERON:0002037 | 88.99 | gold quality |
| right lobe of liver | UBERON:0001114 | 88.95 | gold quality |
| small intestine | UBERON:0002108 | 88.81 | gold quality |
| saliva-secreting gland | UBERON:0001044 | 88.53 | gold quality |
| colonic mucosa | UBERON:0000317 | 88.24 | gold quality |
| mouth mucosa | UBERON:0003729 | 88.23 | gold quality |
| prostate gland | UBERON:0002367 | 87.35 | gold quality |
| monocyte | CL:0000576 | 86.94 | gold quality |
| leukocyte | CL:0000738 | 86.87 | gold quality |
| mononuclear cell | CL:0000842 | 86.81 | gold quality |
| subcutaneous adipose tissue | UBERON:0002190 | 86.73 | gold quality |
| mucosa of sigmoid colon | UBERON:0004993 | 86.55 | gold quality |
| left lobe of thyroid gland | UBERON:0001120 | 86.42 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 86.41 | gold quality |
| prefrontal cortex | UBERON:0000451 | 86.08 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 85.29 | gold quality |
| right lobe of thyroid gland | UBERON:0001119 | 85.18 | gold quality |
| upper arm skin | UBERON:0004263 | 85.17 | gold quality |
| nucleus accumbens | UBERON:0001882 | 84.73 | gold quality |
| frontal cortex | UBERON:0001870 | 84.58 | gold quality |
| thyroid gland | UBERON:0002046 | 84.24 | gold quality |
| liver | UBERON:0002107 | 84.08 | gold quality |
| adult organism | UBERON:0007023 | 84.08 | gold quality |
| upper leg skin | UBERON:0004262 | 84.05 | silver quality |
| intestine | UBERON:0000160 | 83.75 | gold quality |
| right coronary artery | UBERON:0001625 | 83.43 | gold quality |
| cingulate cortex | UBERON:0003027 | 83.42 | gold quality |
| anterior cingulate cortex | UBERON:0009835 | 83.16 | gold quality |
| neocortex | UBERON:0001950 | 82.98 | gold quality |
| adipose tissue | UBERON:0001013 | 82.77 | gold quality |
| blood | UBERON:0000178 | 82.57 | gold quality |
| large intestine | UBERON:0000059 | 82.23 | gold quality |
| colonic epithelium | UBERON:0000397 | 82.02 | gold quality |
| adipose tissue of abdominal region | UBERON:0007808 | 81.97 | gold quality |
| colon | UBERON:0001155 | 81.94 | gold quality |
| omental fat pad | UBERON:0010414 | 81.89 | gold quality |
| peritoneum | UBERON:0002358 | 81.82 | gold quality |
| nasal cavity epithelium | UBERON:0005384 | 81.70 | silver quality |
| olfactory segment of nasal mucosa | UBERON:0005386 | 81.61 | gold quality |
| orbitofrontal cortex | UBERON:0004167 | 81.49 | gold quality |
| Brodmann (1909) area 46 | UBERON:0006483 | 81.33 | gold quality |
| connective tissue | UBERON:0002384 | 81.31 | gold quality |
| popliteal artery | UBERON:0002250 | 81.22 | gold quality |
| tibial artery | UBERON:0007610 | 81.18 | gold quality |
| type B pancreatic cell | CL:0000169 | 80.78 | gold quality |
| gall bladder | UBERON:0002110 | 80.66 | gold quality |
| left coronary artery | UBERON:0001626 | 80.63 | gold quality |
| cerebral cortex | UBERON:0000956 | 80.53 | gold quality |
| right atrium auricular region | UBERON:0006631 | 80.44 | gold quality |
| coronary artery | UBERON:0001621 | 80.30 | gold quality |
| Brodmann (1909) area 10 | UBERON:0013541 | 80.15 | gold quality |
| body of stomach | UBERON:0001161 | 79.75 | gold quality |
| telencephalon | UBERON:0001893 | 79.51 | gold quality |
| olfactory bulb | UBERON:0002264 | 79.31 | gold quality |
| nasal cavity mucosa | UBERON:0001826 | 79.16 | gold quality |
| pancreatic ductal cell | CL:0002079 | 79.11 | silver quality |
| superior frontal gyrus | UBERON:0002661 | 78.85 | gold quality |
| cardiac atrium | UBERON:0002081 | 78.67 | gold quality |
| urethra | UBERON:0000057 | 78.57 | gold quality |
| caudate nucleus | UBERON:0001873 | 78.34 | gold quality |
| primary visual cortex | UBERON:0002436 | 78.30 | gold quality |
| aorta | UBERON:0000947 | 78.27 | gold quality |
| hair follicle | UBERON:0002073 | 78.24 | gold quality |
| urinary bladder | UBERON:0001255 | 78.20 | gold quality |
| jejunum | UBERON:0002115 | 78.03 | gold quality |
| lymph node | UBERON:0000029 | 77.87 | gold quality |
| brain | UBERON:0000955 | 77.72 | gold quality |
| esophagus mucosa | UBERON:0002469 | 77.56 | gold quality |
| postcentral gyrus | UBERON:0002581 | 77.37 | gold quality |
| forebrain | UBERON:0001890 | 77.26 | gold quality |
| central nervous system | UBERON:0001017 | 77.23 | gold quality |
| occipital lobe | UBERON:0002021 | 77.16 | gold quality |
| spleen | UBERON:0002106 | 77.01 | gold quality |
| anatomical system | UBERON:0000467 | 76.89 | gold quality |
| apex of heart | UBERON:0002098 | 76.86 | gold quality |
| multicellular organism | UBERON:0000468 | 76.85 | gold quality |
| vermiform appendix | UBERON:0001154 | 76.85 | gold quality |
| vagina | UBERON:0000996 | 76.84 | gold quality |
| material anatomical entity | UBERON:0000465 | 76.83 | gold quality |
Single-cell (SCXA)
Detected in 2 experiment(s), a significant marker in 2.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-GEOD-125970 | yes | 14.27 |
| E-ANND-3 | no | 0.00 |
HPA expression
RNA tissue specificity: Tissue enhanced
showing 60 of 80 HPA tissues / cells by nTPM:
| Tissue / cell | Axis | nTPM | Protein (IHC) |
|---|---|---|---|
| Lung | tissue | 37.6 | medium |
| Duodenum | tissue | 32.4 | medium |
| Cerebral cortex | tissue | 29.0 | low |
| Insular cortex | tissue | 29.0 | |
| Small intestine | tissue | 28.2 | medium |
| Temporal cortex | tissue | 27.0 | |
| Prefrontal cortex | tissue | 26.9 | |
| Retrosplenial and cingulate cortex | tissue | 26.8 | |
| Colon | tissue | 26.3 | medium |
| Retrosplenial cortex | tissue | 26.2 | |
| Rectum | tissue | 26.1 | medium |
| Motor cortex | tissue | 25.6 | |
| Hippocampal formation | tissue | 24.5 | |
| Entorhinal cortex | tissue | 24.5 | |
| Somatosensory cortex | tissue | 24.4 | |
| Occipital cortex | tissue | 23.9 | |
| Liver | tissue | 23.1 | low |
| Amygdala | tissue | 21.6 | |
| Olfactory bulb | tissue | 20.4 | |
| Postcentral gyrus | tissue | 20.0 | |
| Cerebellum | tissue | 18.2 | medium |
| Prostate | tissue | 18.2 | high |
| Skin 1 | tissue | 17.1 | medium |
| Corpus callosum | tissue | 16.7 | |
| Nucleus accumbens | tissue | 16.5 | |
| Ventral forebrain | tissue | 15.9 | |
| Basal ganglia | tissue | 14.5 | low |
| Septum | tissue | 14.2 | |
| Adipose tissue | tissue | 13.0 | low |
| Periaqueductal gray | tissue | 12.5 | |
| Putamen | tissue | 12.2 | |
| Salivary gland | tissue | 11.6 | medium |
| Hypothalamus | tissue | 11.4 | |
| Substantia nigra | tissue | 10.8 | |
| Spinal cord | tissue | 10.0 | |
| Medulla oblongata | tissue | 9.9 | |
| Midbrain | tissue | 9.8 | |
| Thalamus | tissue | 9.3 | |
| Superior colliculi | tissue | 9.1 | |
| Breast | tissue | 8.8 | medium |
| Seminal vesicle | tissue | 8.4 | medium |
| Pons | tissue | 8.3 | |
| Frontal cortex | tissue | 8.0 | |
| Hippocampus | tissue | 6.4 | low |
| Epididymis | tissue | 6.2 | medium |
| Gallbladder | tissue | 5.6 | medium |
| Stomach 1 | tissue | 5.4 | medium |
| Urinary bladder | tissue | 4.9 | medium |
| Vagina | tissue | 4.7 | medium |
| Thyroid gland | tissue | 4.6 | medium |
| Tongue | tissue | 4.5 | |
| Caudate putamen | tissue | 4.5 | |
| Lymph node | tissue | 4.3 | medium |
| Spleen | tissue | 4.1 | low |
| Retina | tissue | 3.9 | |
| Parathyroid gland | tissue | 3.9 | medium |
| Appendix | tissue | 3.2 | medium |
| Esophagus | tissue | 3.1 | medium |
| Choroid plexus | tissue | 3.0 | |
| Heart muscle | tissue | 2.8 | medium |
Brain sub-regions (HPA Brain Atlas): detected in 192; highest nTPM — Temporo-occipital transitional zone (23.9), Posterior insular cortex (21.5), Transversal temporal gyrus, anterior (21.1), Superior temporal gyrus (20.9), Transversal temporal gyrus, posterior (20.9).
Regulation
Is transcription factor: no
Upstream regulators (CollecTRI, top): GLI2, IKZF1, NEUROD4, NR1H4
miRNA regulators (miRDB)
Targeting VIPR1 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific).
showing 30 of 64 miRNAs:
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-4481 | 100.00 | 66.42 | 1669 |
| HSA-MIR-7110-3P | 100.00 | 73.18 | 2486 |
| HSA-MIR-4682 | 100.00 | 68.89 | 1258 |
| HSA-MIR-511-3P | 99.99 | 68.85 | 1467 |
| HSA-MIR-4745-5P | 99.98 | 65.95 | 1028 |
| HSA-MIR-96-5P | 99.95 | 72.80 | 2140 |
| HSA-MIR-6755-5P | 99.95 | 65.59 | 464 |
| HSA-MIR-12133 | 99.92 | 71.82 | 2006 |
| HSA-MIR-1271-5P | 99.91 | 71.99 | 1972 |
| HSA-MIR-765 | 99.84 | 68.24 | 2442 |
| HSA-MIR-6756-5P | 99.82 | 67.97 | 2466 |
| HSA-MIR-374C-5P | 99.80 | 72.06 | 2910 |
| HSA-MIR-655-3P | 99.80 | 72.19 | 2909 |
| HSA-MIR-320A-3P | 99.77 | 69.73 | 2107 |
| HSA-MIR-320B | 99.77 | 69.73 | 2107 |
| HSA-MIR-320C | 99.77 | 69.73 | 2107 |
| HSA-MIR-320D | 99.77 | 69.73 | 2107 |
| HSA-MIR-4429 | 99.77 | 69.62 | 2111 |
| HSA-MIR-6794-5P | 99.76 | 66.38 | 1048 |
| HSA-MIR-11181-3P | 99.75 | 66.38 | 2205 |
| HSA-MIR-6745 | 99.74 | 65.33 | 1321 |
| HSA-MIR-4716-3P | 99.69 | 66.73 | 1022 |
| HSA-MIR-6766-5P | 99.68 | 67.70 | 2325 |
| HSA-MIR-5197-5P | 99.64 | 69.08 | 1494 |
| HSA-MIR-4743-3P | 99.62 | 68.12 | 2095 |
| HSA-MIR-105-5P | 99.54 | 69.24 | 2060 |
| HSA-MIR-7853-5P | 99.54 | 69.30 | 2055 |
| HSA-MIR-363-5P | 99.46 | 64.51 | 1015 |
| HSA-MIR-1324 | 99.46 | 66.57 | 1302 |
| HSA-MIR-508-5P | 99.41 | 64.25 | 1248 |
Functional genomics
gnomAD constraint: pLI 1.62e-23, LOEUF 1.34, missense Z -0.636 — population loss-of-function intolerance (pLI ≥ 0.9 = LoF-intolerant; lower LOEUF = more constrained). gnomAD
Regional missense constraint (gnomAD RMC): no regional variation along ENST00000325123 — one region, missense o/e 1.04.
Literature-anchored findings (GeneRIF, showing 40)
- Vasoactive intestinal peptide receptor-1 (VPAC-1) is a novel gene target of the hemolymphopoietic transcription factor Ikaros. (PMID:11812772)
- VPAC1 is a cellular neuroendocrine receptor expressed on T cells that actively facilitates productive HIV-1 infection. (PMID:11834941)
- Thus, the highly diverged chemical properties of the hydrophobic “YL” motif and charged “DR(Y)” motif could be a crucial difference between the Secretin Receptor Family and the Rhodopsin Family with respect to receptor activation and G-protein coupling. (PMID:11859928)
- VPAC1 receptor mRNA is expressed in the trigeminal, otic and superior cervical ganglia (prejunctional) and cerebral arteries (postjunctional). (PMID:11930171)
- a small sequence in the third intracellular loop of the VPAC(1) receptor is responsible for the efficient agonist-stimulated intracellular calcium concentration increase (PMID:11981043)
- Genetic complexity of HVR1 quasispecies of hepatitis C virus in patients with cirrhosis. (PMID:12094871)
- a selective filter; Identification of a critical domain for restricting secretin binding (PMID:12133828)
- Vasoactive intestinal peptide (VIP) inhibits the proliferation of bone marrow progenitors through the VPAC1 receptor. (PMID:12225791)
- the role of charged residues in the intracellular loop 3 and the proximal C-terminal tail of hVPAC1 receptor for agonist-induced adenylyl cyclase activation (PMID:12690118)
- cloning and sequencing of 5’ flanking region; VPAC1 may play a functional role in development of both cerebellum and adrenal medulla (PMID:14599709)
- Data suggest that vasoactive intestinal peptide directly stimulates cortisol secretion from H295 cells via activation of the VPAC1 receptor subtype. (PMID:15171718)
- the hVPAC1 receptor binds to vasoactive intestinal peptide at its N-terminal ectodomain (PMID:15247290)
- Interaction of different G proteins with the recombinant VPAC1 receptor involves different receptor sub-domains. (PMID:15451021)
- the VPAC1 receptor carboxyl terminus has a role in agonist-induced receptor phosphorylation, internalization, and recycling (PMID:15932876)
- Farnesoid X receptor agonists may increase gallbladder fluid secretion through transcriptional activation of VPAC1. (PMID:16037943)
- analysis of the two-step activation mechanism of VPAC receptor and of class II G protein-coupled receptors (PMID:16520374)
- Thr429 phosphorylation has a role in activation of human VPAC1 (PMID:16554109)
- 125I-[Bpa28-vasoactive intestinal peptide] was covalently bonded to the 121-133 fragment within the N-terminal ectodomain of the receptor (PMID:16888162)
- Photoaffinity experiments clearly indicated that the 6-28 part of VIP physically interacts with the N-terminal ectodomain of VPAC1 receptor (PMID:16888167)
- MCF-7 cells have VPAC1 receptors that bound the VIP chemotherapeutic conjugate (PMID:16888206)
- observations provide additional evidence for a role of proapoptotic caspase adaptor protein and PAC1 R in the events determining the outcome of prostate cancer (PMID:16888207)
- identification and characterization of novel five-transmembrane(5TM) isoforms of VPAC1 (PMID:16934434)
- expression of VIP receptor-1 (VPAC1) and VPAC2 in CD4+ T cells changed reciprocally in the context of the activation state (PMID:17077178)
- The differential expression of VIPR1 in ulcerative colitis and Crohn’s disease mucosa suggests that the VIP system plays different roles in the pathogenesis of inflammatory bowel disease. (PMID:17611633)
- Both intra- and extracellular Ca2+ play a role in controlling pro-inflammatory functions stimulated by PACAP which acts through a VPAC-1, FPRL1/Galphai/PI3K/ERK pathway and a VPAC-1/Galphas/PKA/p38 pathway to fully activate monocytes (PMID:17651798)
- analysis of VIP 16gamma-glutamyl diamino derivative positive charges on hVPAC1 and hVPAC2 receptor function (PMID:17883247)
- Structural studies provide a detailed molecular understanding of the VIP-VPAC1 receptor interaction. (PMID:17885205)
- VPAC1 signaling tempers normal megakaryopoiesis, and inhibition of this pathway stimulates megakaryocyte differentiation. (PMID:18000164)
- Proinflammatory effect of VIP is mediated via the specific G protein-coupled receptor VIP/pituitary adenylate cyclase-activating protein (VPAC1) receptor as well as via FPRL1. (PMID:18174366)
- VIP and PACAP levels were decreased in anterior vaginal wall of stress urinary incontinence and pelvic organ prolapse patients,they may participate in the pathophysiology of these diseases. (PMID:18351280)
- deficient expression of VPAC1 (vasoactive intestinal peptide receptor 1) in immune cells of Rheumatoid Arthritis was associated with the predominant proinflammatory Th1 mileu; reduced VPAC1 expression in RA is associated with genetic polymorphism (PMID:18383379)
- Results indicate that the N-terminal part of VIP physically interacts with the N-ted in the continuity of 6-28 VIP sequence; and the N-terminal part of VIP and its antagonist (PG97-269) have different sites of interaction with the VPAC1 receptor N-ted. (PMID:18597186)
- VIP acts in an autocrine fashion via VPAC1 to inhibit megakaryocyte proliferation and induce proplatelet formation (PMID:18663606)
- HLA-B (*)2705 and a functional polymorphism in VIPR1 gene, might be due to a founder effect or might be the result of a selective pressure. Consequent downregulation of this receptor in presence of a ‘danger’ signal might influence susceptibility to AS. (PMID:18668120)
- Patients with idiopathic achalasia show a significant difference in allele, genotype and phenotype of VIPR1 distribution of snps (PMID:19309439)
- We describe significant upregulation of the SPP1 gene, downregulation of VIPR1, and losses of the VIPR1 gene. (PMID:20014941)
- Results indicate that VPAC1, but not VPAC2 or PAC1, up-regulation in macrophages is a common mechanism in response to acute and chronic pro-inflammatory stimuli. (PMID:20026142)
- Moreover, we report the markedly nuclear localization of VPAC(1) receptors in estrogen-dependent (T47D) and independent (MDA-MB-468) human breast cancer cell lines (PMID:20691743)
- role of in MicroRNA 525-5p down-modulating VPAC1 expressio (PMID:20706588)
- The VIPR1 polymorphism, previously linked to gastrointestinal dysmotility disorders, does not represent a common risk factor for gallstones in the general or in an elderly population. (PMID:20922191)
Cross-species orthologs
3 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | vipr1b | ENSDARG00000059058 |
| mus_musculus | Vipr1 | ENSMUSG00000032528 |
| rattus_norvegicus | Vipr1 | ENSRNOG00000047457 |
Paralogs (42): CALCR (ENSG00000004948), GIPR (ENSG00000010310), ADGRA2 (ENSG00000020181), CALCRL (ENSG00000064989), GLP2R (ENSG00000065325), ADGRF5 (ENSG00000069122), ADGRL1 (ENSG00000072071), ADCYAP1R1 (ENSG00000078549), SCTR (ENSG00000080293), VIPR2 (ENSG00000106018), CRHR2 (ENSG00000106113), GHRHR (ENSG00000106128), ADGRD1 (ENSG00000111452), GLP1R (ENSG00000112164), ADGRG6 (ENSG00000112414), ADGRL2 (ENSG00000117114), CRHR1 (ENSG00000120088), ADGRB2 (ENSG00000121753), ADGRE5 (ENSG00000123146), ADGRE2 (ENSG00000127507), ADGRE3 (ENSG00000131355), ADGRB3 (ENSG00000135298), PTH2R (ENSG00000144407), ADGRG7 (ENSG00000144820), ADGRL3 (ENSG00000150471), ADGRA3 (ENSG00000152990), ADGRF1 (ENSG00000153292), ADGRF4 (ENSG00000153294), ADGRG4 (ENSG00000156920), ADGRG5 (ENSG00000159618), PTH1R (ENSG00000160801), ADGRL4 (ENSG00000162618), EVA1C (ENSG00000166979), ADGRF3 (ENSG00000173567), ADGRG2 (ENSG00000173698), ADGRE1 (ENSG00000174837), ADGRD2 (ENSG00000180264), ADGRB1 (ENSG00000181790), ADGRG3 (ENSG00000182885), ADGRA1 (ENSG00000197177), ADGRG1 (ENSG00000205336), GCGR (ENSG00000215644)
Mouse-model phenotypes
Observed phenotypes of the mouse ortholog (MGI:109272) from MGI (Alliance of Genome Resources) — knockout/mutant phenotypes, ranked by annotation count. 20 distinct phenotype terms.
| Mouse phenotype (MP) | Records |
|---|---|
| preweaning lethality, incomplete penetrance | 2 |
| hypoglycemia | 1 |
| abnormal intestine morphology | 1 |
| decreased body weight | 1 |
| ataxia | 1 |
| decreased locomotor activity | 1 |
| impaired coordination | 1 |
| abnormal gait | 1 |
| hunched posture | 1 |
| postnatal growth retardation | 1 |
| abnormal glucose homeostasis | 1 |
| increased insulin sensitivity | 1 |
| intestinal obstruction | 1 |
| abnormal exocrine pancreas morphology | 1 |
| impaired glucose tolerance | 1 |
| abnormal enterocyte proliferation | 1 |
| disorganized pancreatic islets | 1 |
| enlarged cecum | 1 |
| lethality at weaning, incomplete penetrance | 1 |
| small intestine hemorrhage | 1 |
Additional cross-species homologs
Sequence homologs in species beyond Ensembl Compara’s model organisms, by Diamond local protein alignment (% sequence identity; best hit per species). Lower-identity rows are more distant homologs. The matched accessions’ gene symbols aren’t in biobtree yet, so each row shows the UniProt accession.
| Organism | UniProt | Identity | Method |
|---|---|---|---|
| Macaca mulatta | Q76LL8 | 99.5% | Diamond |
| Pongo abelii | Q5RAQ1 | 98.5% | Diamond |
| Canis lupus familiaris | Q9TU31 | 95.3% | Diamond |
| Sus scrofa | P50133 | 95.1% | Diamond |
| Bos taurus | Q1LZF7 | 95.1% | Diamond |
| Ovis aries | O62772 | 94.9% | Diamond |
| Gallus gallus | Q90812 | 89.8% | Diamond |
| Oncorhynchus gorbuscha | Q8AXU4 | 86.6% | Diamond |
| Paralichthys olivaceus | Q9IB86 | 86.0% | Diamond |
| Cavia porcellus | O08893 | 85.6% | Diamond |
| Mesocricetus auratus | P43218 | 84.6% | Diamond |
| Xenopus laevis | O42602 | 82.6% | Diamond |
| Oryctolagus cuniculus | O46502 | 80.4% | Diamond |
| Didelphis virginiana | P25107 | 79.4% | Diamond |
| Meleagris gallopavo | Q91085 | 70.3% | Diamond |
| Carassius auratus | Q90308 | 65.2% | Diamond |
| Manduca sexta | P35464 | 53.6% | Diamond |
| Acheta domesticus | Q16983 | 53.6% | Diamond |
| Drosophila melanogaster | Q9W4Y2 | 39.8% | Diamond |
| Caenorhabditis elegans | P30650 | 31.4% | Diamond |
Genomic neighbors (locus context)
Genes flanking this one on the chromosome (NCBI/Entrez gene neighborhood). Positional context only — some neighbors share regulatory elements (bidirectional promoters, antisense/overlapping transcripts), but chromosomal adjacency is not itself a functional relationship (see Interactions for that).
| Symbol | Type | Entrez |
|---|---|---|
| VIPR1-AS1 | ncRNA | 100874007 |
| LYZL4 | protein-coding | 131375 |
| ZBTB47-AS1 | ncRNA | 101928323 |
| NKTR | protein-coding | 4820 |
| SS18L2 | protein-coding | 51188 |
| SEC22C | protein-coding | 9117 |
| KLHL40 | protein-coding | 131377 |
| ZBTB47 | protein-coding | 92999 |
Protein
Protein identifiers
Vasoactive intestinal polypeptide receptor 1 — P32241 (reviewed: P32241)
Alternative names: Pituitary adenylate cyclase-activating polypeptide type II receptor, VPAC1 receptor
All UniProt accessions (4): C9JDT8, C9JH33, P32241, F2Z2U6
UniProt curated annotations — full annotation on UniProt →
Function. G protein-coupled receptor activated by the neuropeptides vasoactive intestinal peptide (VIP) and pituitary adenylate cyclase-activating polypeptide (ADCYAP1/PACAP). Binds VIP and both PACAP27 and PACAP38 bioactive peptides with the following order of ligand affinity VIP = PACAP27 > PACAP38. Ligand binding causes a conformation change that triggers signaling via guanine nucleotide-binding proteins (G proteins) and modulates the activity of downstream effectors. Activates cAMP-dependent pathway.
Subunit / interactions. Interacts with ADCYAP1/PACAP; activated by both PACAP27 and PACAP38 neuropeptides. Interacts with VIP; the interaction results in VIPR1 activation.
Subcellular location. Cell membrane.
Tissue specificity. In lung, HT-29 colonic epithelial cells, Raji B-lymphoblasts. Lesser extent in brain, heart, kidney, liver and placenta. Not expressed in CD4+ or CD8+ T-cells. Expressed in the T-cell lines HARRIS, HuT 78, Jurkat and SUP-T1, but not in the T-cell lines Peer, MOLT-4, HSB and YT.
Similarity. Belongs to the G protein-coupled receptor 2 family.
Isoforms (5)
| UniProt ID | Names | Canonical? |
|---|---|---|
| P32241-1 | Short, hIVR8 | yes |
| P32241-2 | Long, hIVR5 | |
| P32241-3 | 3 | |
| P32241-4 | 4 | |
| P32241-5 | 5 |
RefSeq proteins (5): NP_001238811, NP_001238812, NP_001238813, NP_001238814, NP_004615* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR000832 | GPCR_2_secretin-like | Family |
| IPR001571 | GPCR_2_VIP_rcpt | Family |
| IPR001771 | GPCR_2_VIP_rcpt_1 | Family |
| IPR001879 | GPCR_2_extracellular_dom | Domain |
| IPR017981 | GPCR_2-like_7TM | Domain |
| IPR017983 | GPCR_2_secretin-like_CS | Conserved_site |
| IPR036445 | GPCR_2_extracell_dom_sf | Homologous_superfamily |
| IPR050332 |
Pfam: PF00002, PF02793
UniProt features (68 total): helix 21, topological domain 8, transmembrane region 7, strand 7, disulfide bond 5, splice variant 5, glycosylation site 4, sequence conflict 4, sequence variant 2, turn 2, signal peptide 1, chain 1, mutagenesis site 1
Structure
Experimental structures (PDB)
17 structures by resolution:
| PDB | Title | Method | Resolution (Å) |
|---|---|---|---|
| 5IB2 | Crystal structure of HLA-B*27:05 complexed with the self-peptide pVIPR | X-RAY DIFFRACTION | 1.44 |
| 1OGT | CRYSTAL STRUCTURE OF HLA-B*2705 COMPLEXED WITH THE VASOACTIVE INTESTINAL PEPTIDE TYPE 1 … | X-RAY DIFFRACTION | 1.47 |
| 5DEF | Crystal structure of B*27:04 complex bound to the pVIPR peptide | X-RAY DIFFRACTION | 1.6 |
| 3B6S | Crystal Structure of hla-b*2705 Complexed with the Citrullinated Vasoactive Intestinal … | X-RAY DIFFRACTION | 1.8 |
| 7ALO | Structure of B*27:09/photoRL9 | X-RAY DIFFRACTION | 1.8 |
| 5DEG | Crystal structure of B*27:06 bound to the pVIPR peptide | X-RAY DIFFRACTION | 1.83 |
| 3B3I | Citrullination-dependent differential presentation of a self-peptide by HLA-B27 subtypes | X-RAY DIFFRACTION | 1.86 |
| 5IB1 | Crystal structure of HLA-B*27:05 complexed with the self-peptide pVIPR measured at 295 K | X-RAY DIFFRACTION | 1.91 |
| 5IB3 | Crystal structure of HLA-B*27:05 complexed with the self-peptide pVIPR and Copper | X-RAY DIFFRACTION | 1.91 |
| 3HCV | Crystal structure of HLA-B*2709 complexed with the double citrullinated vasoactive … | X-RAY DIFFRACTION | 1.95 |
| 5IB4 | Crystal structure of HLA-B*27:05 complexed with the self-peptide pVIPR and Nickel | X-RAY DIFFRACTION | 1.95 |
| 3DTX | Crystal structure of HLA-B*2705 complexed with the double citrullinated vasoactive … | X-RAY DIFFRACTION | 2.1 |
| 1OF2 | Crystal structure of HLA-B*2709 complexed with the vasoactive intestinal peptide type 1 … | X-RAY DIFFRACTION | 2.2 |
| 8E3Y | Cryo-EM structure of the VPAC1R-PACAP27-Gs complex | ELECTRON MICROSCOPY | 2.3 |
| 5IB5 | Crystal structure of HLA-B*27:09 complexed with the self-peptide pVIPR and Copper | X-RAY DIFFRACTION | 2.49 |
| 8E3Z | Cryo-EM structure of the VPAC1R-VIP-Gs complex | ELECTRON MICROSCOPY | 2.7 |
| 6VN7 | Cryo-EM structure of an activated VIP1 receptor-G protein complex | ELECTRON MICROSCOPY | 3.2 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-P32241-F1 | 76.72 | 0.30 |
Antibody-complex structures (SAbDab)
3 antibodies co-crystallized with this protein: 6VN7, 8E3Y, 8E3Z
Human Protein Atlas
Protein class: Transporters, G-protein coupled receptors, GPCRs excl olfactory receptors, Family 2 (B) receptors, Predicted membrane proteins, GPCRHMM predicted membrane proteins
Protein evidence: Evidence at protein level
Antibody reliability (HPA): IH approved
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Disulfide bonds (5)
| Type | Positions |
|---|---|
| Disulfide bond | 37–208, 50–72, 63–105, 86–122, 215–285 |
Glycosylation sites (4)
| Type | Positions |
|---|---|
| N-linked (glcnac…) asparagine | 58, 69, 100, 290 |
Mutagenesis-validated functional residues (1)
| Position | Phenotype |
|---|---|
| 139 | decreased adcyap1/pacap27 potency for vipr1. |
Function
Pathways and Gene Ontology
Reactome pathways
0 curated (TAS) of 7; 0 disease pathways. Curated-first; evidence = TAS (manually curated) vs IEA (electronic inference).
7 pathways:
| ID | Pathway | Evidence |
|---|---|---|
| R-HSA-373080 | Class B/2 (Secretin family receptors) | — |
| R-HSA-418555 | G alpha (s) signalling events | — |
| R-HSA-388396 | GPCR downstream signalling | — |
| R-HSA-500792 | GPCR ligand binding | — |
| R-HSA-420092 | Glucagon-type ligand receptors | — |
| R-HSA-162582 | Signal Transduction | — |
| R-HSA-372790 | Signaling by GPCR | — |
MSigDB gene sets: 214 (showing top):
MODULE_92, REACTOME_GLUCAGON_TYPE_LIGAND_RECEPTORS, MODULE_274, MODULE_64, MODULE_329, PID_REG_GR_PATHWAY, GOBP_ADENYLATE_CYCLASE_MODULATING_G_PROTEIN_COUPLED_RECEPTOR_SIGNALING_PATHWAY, MODULE_75, ACEVEDO_LIVER_TUMOR_VS_NORMAL_ADJACENT_TISSUE_DN, MODULE_206, KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION, CAIRO_HEPATOBLASTOMA_DN, chr3p22, GOMF_PEPTIDE_RECEPTOR_ACTIVITY, NAKAYAMA_SOFT_TISSUE_TUMORS_PCA2_DN
GO Biological Process (7): cell surface receptor signaling pathway (GO:0007166), G protein-coupled receptor signaling pathway (GO:0007186), G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger (GO:0007187), adenylate cyclase-modulating G protein-coupled receptor signaling pathway (GO:0007188), adenylate cyclase-activating G protein-coupled receptor signaling pathway (GO:0007189), positive regulation of cell population proliferation (GO:0008284), signal transduction (GO:0007165)
GO Molecular Function (7): pituitary adenylate cyclase-activating polypeptide receptor activity (GO:0001634), vasoactive intestinal polypeptide receptor activity (GO:0004999), G protein-coupled peptide receptor activity (GO:0008528), peptide hormone binding (GO:0017046), transmembrane signaling receptor activity (GO:0004888), G protein-coupled receptor activity (GO:0004930), protein binding (GO:0005515)
GO Cellular Component (3): plasma membrane (GO:0005886), signaling receptor complex (GO:0043235), membrane (GO:0016020)
Reactome top-level categories
5 top-level categories:
| Category | Pathways |
|---|---|
| Signaling by GPCR | 2 |
| GPCR downstream signalling | 1 |
| Class B/2 (Secretin family receptors) | 1 |
| Signal Transduction | 1 |
| GPCR ligand binding | 1 |
GO top-level categories
23 GO namespaces:
| Category | Terms |
|---|---|
| G protein-coupled receptor activity | 4 |
| G protein-coupled receptor signaling pathway | 3 |
| signal transduction | 2 |
| adenylate cyclase activity | 1 |
| adenylate cyclase-modulating G protein-coupled receptor signaling pathway | 1 |
| adenylate cyclase activator activity | 1 |
| cell population proliferation | 1 |
| regulation of cell population proliferation | 1 |
| positive regulation of cellular process | 1 |
| cell communication | 1 |
| cellular process | 1 |
| signaling | 1 |
| regulation of cellular process | 1 |
| cellular response to stimulus | 1 |
| peptide receptor activity | 1 |
| hormone binding | 1 |
| signaling receptor activity | 1 |
| transmembrane signaling receptor activity | 1 |
| binding | 1 |
| membrane | 1 |
| cell periphery | 1 |
| protein-containing complex | 1 |
| cellular anatomical structure | 1 |
Experimentally-supported GO annotations
GO terms backed by direct experimental evidence (ECO experimental codes) — 7 of 17 annotations. The rest are phylogenetic / computational / electronic (IEA).
7 experimentally-supported GO terms:
| GO term | NS | Evidence |
|---|---|---|
| G protein-coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger | BP | direct assay |
| adenylate cyclase-activating G protein-coupled receptor signaling pathway | BP | direct assay |
| plasma membrane | CC | direct assay |
| signaling receptor complex | CC | direct assay |
| peptide hormone binding | MF | physical interaction |
| pituitary adenylate cyclase-activating polypeptide receptor activity | MF | direct assay |
| vasoactive intestinal polypeptide receptor activity | MF | direct assay |
Protein interactions and networks
STRING
showing 15 of 860 interactions by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| VIPR1 | VIP | P01282 | 970 |
| VIPR1 | ADCYAP1 | P18509 | 938 |
| VIPR1 | SCT | P09683 | 759 |
| VIPR1 | HTR1D | P28221 | 691 |
| VIPR1 | ADORA1 | P30542 | 678 |
| VIPR1 | ERV3-1 | Q14264 | 613 |
| VIPR1 | ERVFRD-1 | P60508 | 612 |
| VIPR1 | ATG5 | Q9H1Y0 | 608 |
| VIPR1 | GCG | P01275 | 592 |
| VIPR1 | ADORA2A | P29274 | 592 |
| VIPR1 | ERVW-1 | Q9UQF0 | 526 |
| VIPR1 | GHRH | P01286 | 520 |
| VIPR1 | ADA | P00813 | 499 |
| VIPR1 | RAMP1 | O60894 | 498 |
| VIPR1 | PPIP5K2 | O43314 | 494 |
IntAct
Human interaction partners of VIPR1 in IntAct, one row per partner (best MIscore; records = supporting IntAct interaction records).
8 partners by confidence:
| Partner | Interaction type | MIscore | Records |
|---|---|---|---|
| PRDM5 | physical association | 0.560 | 3 |
| HLA-A | direct interaction | 0.440 | 1 |
| VIP | physical association | 0.400 | 2 |
| CALM1 | physical association | 0.400 | 1 |
| TINF2 | physical association | 0.370 | 1 |
| GPR89A | association | 0.350 | 2 |
| ATP9A | association | 0.350 | 1 |
| SLC33A1 | association | 0.350 | 1 |
BioGRID (209 interactions; top human partners by supporting records): AGPAT4 (Affinity Capture-MS; 2 records), ARL6IP5 (Affinity Capture-MS; 2 records), ATP5B (Affinity Capture-MS; 2 records), ATP5F1 (Affinity Capture-MS; 2 records), ATP8 (Affinity Capture-MS; 2 records), DYM (Affinity Capture-MS; 2 records), GPR89A (Affinity Capture-MS; 2 records), KIAA1244 (Affinity Capture-MS; 2 records), MFSD5 (Affinity Capture-MS; 2 records), PTPLB (Affinity Capture-MS; 2 records), REEP6 (Affinity Capture-MS; 2 records), RNF13 (Affinity Capture-MS; 2 records), SC5D (Affinity Capture-MS; 2 records), SLC25A17 (Affinity Capture-MS; 2 records), SLC7A2 (Affinity Capture-MS; 2 records)
SIGNOR signaling
13 signaling interactions:
| A | Effect | B | Mechanism |
|---|---|---|---|
| ADCYAP1 | up-regulates | VIPR1 | binding |
| VIP | up-regulates | VIPR1 | binding |
| VIPR1 | “up-regulates activity” | GNAI1 | binding |
| VIPR1 | “up-regulates activity” | GNAI2 | binding |
| VIPR1 | “up-regulates activity” | GNAZ | binding |
| VIPR1 | “up-regulates activity” | GNA11 | binding |
| VIPR1 | “up-regulates activity” | GNA14 | binding |
| VIPR1 | “up-regulates activity” | GNA12 | binding |
| VIPR1 | “up-regulates activity” | GNAS | binding |
| VIPR1 | “up-regulates activity” | GNAO1 | binding |
| VIPR1 | “up-regulates activity” | GNAQ | binding |
| VIPR1 | “up-regulates activity” | GNA15 | binding |
| VIPR1 | “up-regulates activity” | GNA13 | binding |
Protein complexes (CORUM) (5)
Experimentally-characterized complexes this protein is a subunit of (★ = the complex contains a known drug target).
5 complexes by size:
| Complex | Subunits | Members |
|---|---|---|
| VIPR1-VIPR2 complex | 2 | VIPR1, VIPR2 |
| ★ SCTR-VIPR1 complex | 2 | SCTR, VIPR1 |
| ★ RAMP1-VIPR1 complex | 2 | VIPR1, RAMP1 |
| ★ RAMP3-VIPR1 complex | 2 | VIPR1, RAMP3 |
| ★ RAMP2-VIPR1 complex | 2 | RAMP2, VIPR1 |
Ligand–receptor pairs (CellPhoneDB) (3)
Curated ligand–receptor partners (cell-cell communication), distinct from the protein–protein interactions above.
3 ligand–receptor pairs:
| Partner | This gene’s role | Signaling class |
|---|---|---|
| ADCYAP1 | receptor | Signaling by Pituitary adenylate |
| VIP | receptor | Signaling by Vasoactive Intestinal Peptide |
| SCT | receptor | Signaling by Secretin |
Disease & clinical
Genetic variants
Variant evidence for VIPR1: 99 ClinVar records (0 pathogenic / likely pathogenic); 4 GWAS associations.
ClinVar
99 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 0 |
| Likely pathogenic | 0 |
| Uncertain significance | 74 |
| Likely benign | 10 |
| Benign | 8 |
SpliceAI
Top 10 splice-impact sites by Δscore (adjacent positions with the same effect merged into one range; 44 predictions of 1,323):
| Position(s) | Effect | Δscore | Sites |
|---|---|---|---|
| 3:42513747–42513748 | acceptor_loss | 1.0000 | 5 |
| 3:42519221–42519222 | acceptor_loss | 1.0000 | 6 |
| 3:42519331–42519332 | donor_loss | 1.0000 | 4 |
| 3:42527497–42527498 | donor_loss | 1.0000 | 5 |
| 3:42530777–42530778 | acceptor_loss | 1.0000 | 6 |
| 3:42530898 | donor_gain | 1.0000 | |
| 3:42535341–42535342 | acceptor_loss | 1.0000 | 5 |
| 3:42536088–42536089 | acceptor_loss | 1.0000 | 6 |
| 3:42502814–42502815 | donor_loss | 0.9900 | 5 |
| 3:42513748 | acceptor_loss | 0.9900 |
AlphaMissense
801 missense substitutions predicted likely pathogenic (of 2,997 scored), across 208 residues. Top 20 hotspot residues, ranked by the number of likely-pathogenic substitutions (of those reachable by a single-nucleotide change), then by mean score:
| Residue | Likely-pathogenic substitutions | Mean am_pathogenicity | Max am_pathogenicity |
|---|---|---|---|
| D68 | 8 | 0.933 | 0.978 |
| F182 | 8 | 0.933 | 0.985 |
| H178 | 8 | 0.932 | 0.987 |
| F350 | 8 | 0.924 | 0.959 |
| F312 | 8 | 0.883 | 0.969 |
| D196 | 8 | 0.874 | 0.940 |
| F357 | 8 | 0.854 | 0.972 |
| N175 | 8 | 0.835 | 0.984 |
| C105 | 7 | 0.981 | 0.992 |
| W73 | 7 | 0.975 | 0.998 |
| C86 | 7 | 0.973 | 0.984 |
| W110 | 7 | 0.973 | 0.998 |
| C122 | 7 | 0.971 | 0.985 |
| C72 | 7 | 0.968 | 0.983 |
| C63 | 7 | 0.963 | 0.987 |
| W67 | 7 | 0.961 | 0.996 |
| E236 | 7 | 0.961 | 0.986 |
| C285 | 7 | 0.946 | 0.973 |
| W286 | 7 | 0.946 | 0.995 |
| F185 | 7 | 0.942 | 0.979 |
HPA cancer prognostics
RNA cancer specificity: Cancer enhanced (Prostate Adenocarcinoma)
Human Protein Atlas survival analysis — favorable = higher expression predicts better survival.
5 prognostic cancer types:
| Cancer | Prognostic | p-value |
|---|---|---|
| Kidney Renal Clear Cell Carcinoma (TCGA) | favorable | 5.29e-05 |
| Bladder Urothelial Carcinoma (TCGA) | favorable | 0.000159 |
| Liver Hepatocellular Carcinoma (validation) | favorable | 0.000431 |
| Kidney Renal Clear Cell Carcinoma (validation) | favorable | 0.000626 |
| Liver Hepatocellular Carcinoma (TCGA) | favorable | 0.000915 |
Disease associations
OMIM: gene MIM:192321 | disease phenotypes:
GWAS associations
4 associations:
| Study | Trait | p-value |
|---|---|---|
| GCST008103_49 | Bipolar disorder | 6e-7 |
| GCST003134_7 | Cerebrospinal fluid clusterin levels | 3e-6 |
| GCST012299_4 | Schizophrenia, bipolar disorder or major depressive disorder x sex interaction (3df) | 4e-6 |
| GCST008156_19 | Hip circumference adjusted for BMI | 8e-6 |
EFO canonical traits (from GWAS)
2 canonical traits:
| EFO ID | Trait name |
|---|---|
| EFO:0008039 | BMI-adjusted hip circumference |
| EFO:0008343 | sex interaction measurement |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (2): CHEMBL4524128 (PROTEIN FAMILY), CHEMBL5144 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
Phase ≥1, by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 216 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
1 molecules by phase:
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL1933349 | MK-0893 | 2 | 216 |
PharmGKB: 1 entry (CPIC guideline: no)
GtoPdb / IUPHAR curated pharmacology
(IUPHAR/BPS Guide to Pharmacology — expert-curated)
Target class: gpcr — VIP and PACAP receptors
Most potent curated ligand interactions (20 total), top 20:
| Ligand | Action | Affinity | Parameter |
|---|---|---|---|
| [Ala11,22,28]VIP | Agonist | 10.2 | pEC50 |
| VIP | Agonist | 10.0 | pEC50 |
| [125I]VIP (human, mouse, rat) | Agonist | 9.4 | pKd |
| N-stearyl-[Nle17]VIP | Agonist | 8.3 | pIC50 |
| [Lys15,Arg16,Leu27]VIP-(1-7)/GRF-(8-27)-NH2 | Agonist | 7.7 | pIC50 |
| PACAP-27 | Agonist | 7.6 | pEC50 |
| N-stearyl-[Nle17] neurotensin-(6-11)/VIP-(7-28) | Antagonist | 7.5 | pIC50 |
| PACAP-38 | Agonist | 7.4 | pEC50 |
| [Arg16]chicken secretin | Agonist | 7.2 | pIC50 |
| PG 97-269 | Antagonist | 7.1 | pIC50 |
| GHRH | Agonist | 6.2 | pKi |
| Ro 25-1553 | Partial agonist | 6.0 | pEC50 |
| PHI | Agonist | 6.0 | pIC50 |
| helodermin | Agonist | 6.0 | pIC50 |
| PHM | Agonist | 5.7 | pKi |
| PG 99-465 | Agonist | 5.5 | pEC50 |
| PHV | Agonist | 5.5 | pIC50 |
| Ro 25-1392 | Agonist | 5.5 | pKi |
| BAY 55-9837 | Agonist | 5.1 | pIC50 |
| secretin | Agonist | 5.0 | pKi |
Binding affinities (BindingDB)
14 measured of 15 human assays (17 total across all organisms); most potent 14 below. Values come from heterogeneous assays and are not directly comparable.
| Ligand | Measure | Value | Patent |
|---|---|---|---|
| CHEMBL5220770 | EC50 | 0.03 nM | |
| CHEMBL3884667 | IC50 | 0.11 nM | |
| CHEMBL219499 | EC50 | 0.13 nM | |
| 3-[[5-[4-(tert-butylsulfamoyl)naphthalen-1-yl]-4-(cyclohexylmethyl)-1,3-thiazole-2-carbonyl]amino]cyclobutane-1-carboxylic acid | IC50 | 0.43 nM | US-10301272: Carboxamide or sulfonamide substituted thiazoles and related derivatives as modulators for the orphan nuclear receptor ROR[γ] |
| [Bip6]PACAP27 | EC50 | 1 nM | |
| NSC_0 | KI | 1.7 nM | |
| PACAP | EC50 | 2.1 nM | |
| CHEMBL1893324 | EC50 | 2.3 nM | |
| CHEMBL5219662 | IC50 | 3.5 nM | |
| PACAP27 | EC50 | 5.6 nM | |
| CHEMBL3736230 | IC50 | 44.7 nM | |
| CHEMBL3736134 | IC50 | 57 nM | |
| Ac-L-His-L-Ser-L-Asp-L-Ala-L-Val-L-Phe-L-Thr-L-Glu-L-Asn-L-Tyr-L-Thr-L-Lys-L-Leu-L-Arg-L-Lys-L-Gln-L-Nle-L-Ala-L-Ala-L-Lys-L-Lys(1)-L-Tyr-L-Leu-L-Asn-L-Asp(1)-L-Leu-L-Lys-L-Lys-Gly-Gly-L-Thr-NH2 | KI | 1020 nM | |
| MK-0893 | IC50 | 92000 nM |
ChEMBL bioactivities
44 potent at pChembl≥5 of 45 total, top 43 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 10.70 | EC50 | 0.02 | nM | CHEMBL1893324 |
| 10.52 | EC50 | 0.03 | nM | CHEMBL5220770 |
| 10.40 | IC50 | 0.04 | nM | CHEMBL524658 |
| 10.30 | IC50 | 0.05 | nM | CHEMBL524658 |
| 10.21 | Ki | 0.062 | nM | CHEMBL1893324 |
| 10.17 | Ki | 0.067 | nM | CHEMBL1893324 |
| 9.96 | IC50 | 0.11 | nM | CHEMBL1893324 |
| 9.96 | IC50 | 0.11 | nM | CHEMBL3884667 |
| 9.92 | IC50 | 0.12 | nM | CHEMBL1893324 |
| 9.71 | EC50 | 0.1952 | nM | CHEMBL4294827 |
| 9.57 | IC50 | 0.27 | nM | CHEMBL1893324 |
| 9.45 | EC50 | 0.3575 | nM | CHEMBL4280734 |
| 9.33 | IC50 | 0.47 | nM | CHEMBL4128926 |
| 9.22 | EC50 | 0.6 | nM | CHEMBL219499 |
| 8.66 | EC50 | 2.17 | nM | CHEMBL4295255 |
| 8.35 | EC50 | 4.426 | nM | CHEMBL4281814 |
| 8.31 | IC50 | 4.9 | nM | CHEMBL4296687 |
| 8.25 | EC50 | 5.658 | nM | CHEMBL4277709 |
| 8.23 | IC50 | 5.888 | nM | CHEMBL524852 |
| 8.05 | IC50 | 9 | nM | CHEMBL3736134 |
| 8.04 | EC50 | 9.088 | nM | CHEMBL4294843 |
| 8.03 | IC50 | 9.333 | nM | CHEMBL3736134 |
| 8.02 | EC50 | 9.515 | nM | CHEMBL4291119 |
| 7.99 | EC50 | 10.24 | nM | CHEMBL4295255 |
| 7.94 | IC50 | 11.48 | nM | CHEMBL3736230 |
| 7.92 | IC50 | 12 | nM | CHEMBL3736230 |
| 7.92 | IC50 | 12 | nM | CHEMBL219499 |
| 7.85 | IC50 | 14.13 | nM | CHEMBL507480 |
| 7.19 | EC50 | 64.4 | nM | CHEMBL4284839 |
| 7.15 | EC50 | 71.18 | nM | CHEMBL4281905 |
| 7.05 | EC50 | 89.34 | nM | CHEMBL4282941 |
| 6.93 | IC50 | 118.4 | nM | CHEMBL5219662 |
| 6.88 | EC50 | 133 | nM | CHEMBL4282016 |
| 6.66 | EC50 | 217.7 | nM | CHEMBL4277441 |
| 6.53 | EC50 | 293 | nM | CHEMBL4286419 |
| 6.34 | EC50 | 461.4 | nM | CHEMBL4290756 |
| 6.29 | EC50 | 516.3 | nM | CHEMBL4277799 |
| 6.11 | EC50 | 785.3 | nM | CHEMBL4291903 |
| 6.04 | EC50 | 912.1 | nM | CHEMBL4277783 |
| 6.03 | EC50 | 931.8 | nM | CHEMBL4284961 |
| 5.85 | EC50 | 1420 | nM | CHEMBL4282364 |
| 5.85 | EC50 | 1420 | nM | CHEMBL4277870 |
| 5.82 | EC50 | 1530 | nM | CHEMBL4287451 |
PubChem BioAssay actives
22 with measured affinity, of 142 total; 12 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| (3S)-4-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S,3R)-1-[[(2S)-1-[[(2S)-4-amino-1-[[(2S)-1-[[(2S,3R)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-4-amino-1-[[(2S)-1-[[(2S,3S)-1-[[(2S)-1-[[(2S)-1,4-diamino-1,4-dioxobutan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-3-methyl-1-oxopentan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-1,4-dioxobutan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]amino]-1-oxohexan-2-yl]amino]-1-oxohexan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-1-oxopropan-2-yl]amino]-4-methylsulfanyl-1-oxobutan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-1-oxohexan-2-yl]amino]-5-(diaminomethylideneamino)-1-oxopentan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-5-(diaminomethylideneamino)-1-oxopentan-2-yl]amino]-3-hydroxy-1-oxobutan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]amino]-1,4-dioxobutan-2-yl]amino]-3-carboxy-1-oxopropan-2-yl]amino]-3-hydroxy-1-oxobutan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-1-oxopropan-2-yl]amino]-3-[[(2S)-2-[[(2S)-2-amino-3-(1H-imidazol-4-yl)propanoyl]amino]-3-hydroxypropanoyl]amino]-4-oxobutanoic acid | 1915941: Agonist activity at VPAC1 in human SH-SY5Y cells assessed as cAMP accumulation incubated for 60 mins by Eu-cAMP tracer based LANCE ultra cAMP assay | ec50 | <0.0001 | uM |
| (3S)-4-[[2-[[(2S,3S)-1-[[(2S)-1-[[(2S,3R)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[2-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-4-amino-1-[[(2S)-1,6-diamino-1-oxohexan-2-yl]amino]-1,4-dioxobutan-2-yl]amino]-1-oxohexan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-1-oxohexan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]amino]-1-oxohexan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1-oxohexan-2-yl]amino]-2-oxoethyl]amino]-4-methyl-1-oxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-1-oxopropan-2-yl]amino]-1-oxopropan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]amino]-1-oxohexan-2-yl]amino]-1-oxohexan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-1-oxopropan-2-yl]amino]-4-methylsulfanyl-1-oxobutan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-1-oxohexan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-3-carboxy-1-oxopropan-2-yl]amino]-3-hydroxy-1-oxobutan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-methyl-1-oxopentan-2-yl]amino]-2-oxoethyl]amino]-3-[[(2S)-2-[[(2S)-2-amino-3-(1H-imidazol-5-yl)propanoyl]amino]-3-hydroxypropanoyl]amino]-4-oxobutanoic acid | 1915941: Agonist activity at VPAC1 in human SH-SY5Y cells assessed as cAMP accumulation incubated for 60 mins by Eu-cAMP tracer based LANCE ultra cAMP assay | ec50 | <0.0001 | uM |
| (3S)-4-[[2-[[(2S,3S)-1-[[(2S)-1-[[(2S,3R)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[2-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-4-amino-1-[[(2S)-1,6-diamino-1-oxohexan-2-yl]amino]-1,4-dioxobutan-2-yl]amino]-1-oxohexan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-1-oxohexan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-1-oxohexan-2-yl]amino]-2-oxoethyl]amino]-4-methyl-1-oxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-1-oxopropan-2-yl]amino]-1-oxopropan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]amino]-1-oxohexan-2-yl]amino]-1-oxohexan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-1-oxopropan-2-yl]amino]-4-methylsulfanyl-1-oxobutan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-1-oxohexan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-3-carboxy-1-oxopropan-2-yl]amino]-3-hydroxy-1-oxobutan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-methyl-1-oxopentan-2-yl]amino]-2-oxoethyl]amino]-3-[[(2S)-2-[[(2S)-2-amino-3-(1H-imidazol-5-yl)propanoyl]amino]-3-hydroxypropanoyl]amino]-4-oxobutanoic acid | 1336346: Displacement of [125I]PACAP1-27 from human recombinant PAC1 receptor expressed in CHO cells measured after 120 mins by scintillation counting method | ic50 | <0.0001 | uM |
| (3S)-4-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S,3R)-1-[[(2S)-1-[[(2S)-4-amino-1-[[(2S)-1-[[(2S,3R)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-4-amino-1-[[(2S)-1-[[(2S,3S)-1-[[(2S)-1-[[(2S)-1,4-diamino-1,4-dioxobutan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-3-methyl-1-oxopentan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-1,4-dioxobutan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]amino]-1-oxohexan-2-yl]amino]-1-oxohexan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-1-oxopropan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-1-oxohexan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-3-hydroxy-1-oxobutan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]amino]-1,4-dioxobutan-2-yl]amino]-3-carboxy-1-oxopropan-2-yl]amino]-3-hydroxy-1-oxobutan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-1-oxopropan-2-yl]amino]-3-[[(2S)-2-[[(2S)-2-amino-3-(1H-imidazol-5-yl)propanoyl]amino]-3-hydroxypropanoyl]amino]-4-oxobutanoic acid | 1336366: Displacement of [125I]VIP from human recombinant VPAC1 receptor expressed in CHO cells measured after 60 mins by scintillation counting method | ic50 | 0.0001 | uM |
| 3-[[5-[4-(tert-butylsulfamoyl)naphthalen-1-yl]-4-(cyclohexylmethyl)-1,3-thiazole-2-carbonyl]amino]cyclobutane-1-carboxylic acid | 1494772: Displacement of [125I]VIP from human recombinant VPAC1 receptor after 60 mins by scintillation counting analysis | ic50 | 0.0005 | uM |
| (2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-6-amino-2-[[(2S)-6-amino-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-5-amino-2-[[(2S)-6-amino-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S,3R)-2-[[(2S)-2-[[(2S,3S)-2-[[2-[[(2S)-2-[[(2S)-2-[[(2S)-2-amino-3-(1H-imidazol-5-yl)propanoyl]amino]-3-hydroxypropanoyl]amino]-3-carboxypropanoyl]amino]acetyl]amino]-3-methylpentanoyl]amino]-3-phenylpropanoyl]amino]-3-hydroxybutanoyl]amino]-3-carboxypropanoyl]amino]-3-hydroxypropanoyl]amino]-3-(4-hydroxyphenyl)propanoyl]amino]-3-hydroxypropanoyl]amino]-5-carbamimidamidopentanoyl]amino]-3-(4-hydroxyphenyl)propanoyl]amino]-5-carbamimidamidopentanoyl]amino]hexanoyl]amino]-5-oxopentanoyl]amino]-4-methylsulfanylbutanoyl]amino]propanoyl]amino]-3-methylbutanoyl]amino]hexanoyl]amino]hexanoyl]amino]-3-(4-hydroxyphenyl)propanoyl]amino]-4-methylpentanoyl]amino]propanoyl]amino]propanoyl]amino]-3-methylbutanoyl]amino]-4-methylpentanoic acid | 274568: Activity at human VPAC1 receptor in CHO cells by measuring cAMP accumulation | ec50 | 0.0006 | uM |
| (2S)-4-amino-2-[[(2S)-2-[[(2S,3R)-2-[[(2S)-2-[[(2S)-4-amino-2-[[(2S)-2-[[(2S)-2-[[(2S)-6-amino-2-[[(2S)-6-amino-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-5-amino-2-[[(2S)-6-amino-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S,3R)-2-[[(2S)-2-[[(2S)-4-amino-2-[[(2S)-2-[[(2S,3R)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-amino-3-(1H-imidazol-4-yl)propanoyl]amino]-3-hydroxypropanoyl]amino]-3-carboxypropanoyl]amino]propanoyl]amino]-3-methylbutanoyl]amino]-3-phenylpropanoyl]amino]-3-hydroxybutanoyl]amino]-3-carboxypropanoyl]amino]-4-oxobutanoyl]amino]-3-(4-hydroxyphenyl)propanoyl]amino]-3-hydroxybutanoyl]amino]-5-carbamimidamidopentanoyl]amino]-4-methylpentanoyl]amino]-5-carbamimidamidopentanoyl]amino]hexanoyl]amino]-5-oxopentanoyl]amino]-4-methylsulfanylbutanoyl]amino]propanoyl]amino]-3-methylbutanoyl]amino]hexanoyl]amino]hexanoyl]amino]-3-(4-hydroxyphenyl)propanoyl]amino]-4-methylpentanoyl]amino]-4-oxobutanoyl]amino]-3-hydroxypropanoyl]amino]-3-methylpentanoyl]amino]-4-methylpentanoyl]amino]-4-oxobutanoic acid | 340269: Inhibition of human VIP1 receptor | ic50 | 0.0049 | uM |
| (3S)-4-[[2-[[(2S,3S)-1-[[(2S)-1-[[(2S,3R)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-amino-4-methyl-1-oxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-1-oxopropan-2-yl]amino]-1-oxopropan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]amino]-1-oxohexan-2-yl]amino]-1-oxohexan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-1-oxopropan-2-yl]amino]-4-methylsulfanyl-1-oxobutan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-1-oxohexan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-3-carboxy-1-oxopropan-2-yl]amino]-3-hydroxy-1-oxobutan-2-yl]amino]-1-oxo-3-phenylpropan-2-yl]amino]-3-methyl-1-oxopentan-2-yl]amino]-2-oxoethyl]amino]-3-[[(2S)-2-[[(2S)-2-amino-3-(1H-imidazol-5-yl)propanoyl]amino]-3-hydroxypropanoyl]amino]-4-oxobutanoic acid | 1261357: Displacement of Ac-[125I]-PACAP27 from recombinant human VPAC1 expressed in CHO cells after 90 mins by gamma counting analysis | ic50 | 0.0059 | uM |
| (3S)-4-[[2-[[(2S,3S)-1-[[(2S)-1-[[(2S,3R)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-amino-4-methyl-1-oxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-1-oxopropan-2-yl]amino]-1-oxopropan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]amino]-1-oxohexan-2-yl]amino]-1-oxohexan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-1-oxopropan-2-yl]amino]-4-methylsulfanyl-1-oxobutan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-1-oxohexan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-3-carboxy-1-oxopropan-2-yl]amino]-3-hydroxy-1-oxobutan-2-yl]amino]-3-[4-[2-(4-fluorophenyl)ethynyl]phenyl]-1-oxopropan-2-yl]amino]-3-methyl-1-oxopentan-2-yl]amino]-2-oxoethyl]amino]-3-[[(2S)-2-[[(2S)-2-amino-3-(1H-imidazol-5-yl)propanoyl]amino]-3-hydroxypropanoyl]amino]-4-oxobutanoic acid | 1261357: Displacement of Ac-[125I]-PACAP27 from recombinant human VPAC1 expressed in CHO cells after 90 mins by gamma counting analysis | ic50 | 0.0090 | uM |
| (3S)-4-[[2-[[(2S,3S)-1-[[(2S)-1-[[(2S,3R)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-amino-4-methyl-1-oxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-1-oxopropan-2-yl]amino]-1-oxopropan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]amino]-1-oxohexan-2-yl]amino]-1-oxohexan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-1-oxopropan-2-yl]amino]-4-methylsulfanyl-1-oxobutan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-1-oxohexan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-3-carboxy-1-oxopropan-2-yl]amino]-3-hydroxy-1-oxobutan-2-yl]amino]-1-oxo-3-[4-(2-phenylethynyl)phenyl]propan-2-yl]amino]-3-methyl-1-oxopentan-2-yl]amino]-2-oxoethyl]amino]-3-[[(2S)-2-[[(2S)-2-amino-3-(1H-imidazol-5-yl)propanoyl]amino]-3-hydroxypropanoyl]amino]-4-oxobutanoic acid | 1261357: Displacement of Ac-[125I]-PACAP27 from recombinant human VPAC1 expressed in CHO cells after 90 mins by gamma counting analysis | ic50 | 0.0115 | uM |
| (3S)-4-[[2-[[(2S,3S)-1-[[(2S)-1-[[(2S,3R)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-5-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-6-amino-1-[[(2S)-6-amino-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-[[(2S)-1-amino-4-methyl-1-oxopentan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-1-oxopropan-2-yl]amino]-1-oxopropan-2-yl]amino]-4-methyl-1-oxopentan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]amino]-1-oxohexan-2-yl]amino]-1-oxohexan-2-yl]amino]-3-methyl-1-oxobutan-2-yl]amino]-1-oxopropan-2-yl]amino]-4-methylsulfanyl-1-oxobutan-2-yl]amino]-1,5-dioxopentan-2-yl]amino]-1-oxohexan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]amino]-5-carbamimidamido-1-oxopentan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-3-(4-hydroxyphenyl)-1-oxopropan-2-yl]amino]-3-hydroxy-1-oxopropan-2-yl]amino]-3-carboxy-1-oxopropan-2-yl]amino]-3-hydroxy-1-oxobutan-2-yl]amino]-1-oxo-3-(4-phenylphenyl)propan-2-yl]amino]-3-methyl-1-oxopentan-2-yl]amino]-2-oxoethyl]amino]-3-[[(2S)-2-[[(2S)-2-amino-3-(1H-imidazol-5-yl)propanoyl]amino]-3-hydroxypropanoyl]amino]-4-oxobutanoic acid | 1261357: Displacement of Ac-[125I]-PACAP27 from recombinant human VPAC1 expressed in CHO cells after 90 mins by gamma counting analysis | ic50 | 0.0141 | uM |
| (2S)-6-amino-2-[[(2S)-4-amino-2-[[(2S)-6-amino-2-[[(2S)-2-[[(2S)-2-[[(2S)-5-amino-2-[[(2S)-6-amino-2-[[(2S)-2-[[(2S)-6-amino-2-[[(2S)-2-[[(2S)-6-amino-2-[[2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-6-amino-2-[[(2S)-6-amino-2-[[(2S)-2-[[(2S)-2-[[(2R)-2-[[(2S)-5-amino-2-[[(2S)-6-amino-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S)-2-[[(2S,3R)-2-[[(2S)-2-amino-3-phenylpropanoyl]amino]-3-hydroxybutanoyl]amino]-3-carboxypropanoyl]amino]-3-hydroxypropanoyl]amino]-3-(4-hydroxyphenyl)propanoyl]amino]-3-hydroxypropanoyl]amino]-5-carbamimidamidopentanoyl]amino]-3-(4-hydroxyphenyl)propanoyl]amino]-5-carbamimidamidopentanoyl]amino]hexanoyl]amino]-5-oxopentanoyl]amino]-4-sulfanylbutanoyl]amino]propanoyl]amino]-3-methylbutanoyl]amino]hexanoyl]amino]hexanoyl]amino]-3-(4-hydroxyphenyl)propanoyl]amino]-4-methylpentanoyl]amino]propanoyl]amino]propanoyl]amino]-3-methylbutanoyl]amino]-4-methylpentanoyl]amino]acetyl]amino]hexanoyl]amino]-5-carbamimidamidopentanoyl]amino]hexanoyl]amino]-3-(4-hydroxyphenyl)propanoyl]amino]hexanoyl]amino]-5-oxopentanoyl]amino]-5-carbamimidamidopentanoyl]amino]-3-methylbutanoyl]amino]hexanoyl]amino]-4-oxobutanoyl]amino]hexanoic acid | 1915944: Antagonist activity at VPAC1 in human SH-SY5Y cells assessed as inhibition of PACAP38-induced cAMP accumulation pre-incubated for 30 mins followed by agonist addition and measured after 75 mins by Eu-cAMP tracer based LANCE ultra cAMP assay | ic50 | 0.1184 | uM |
CTD chemical–gene interactions
46 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| Tetrachlorodibenzodioxin | affects cotreatment, increases expression | 7 |
| Particulate Matter | increases expression, increases abundance, decreases reaction | 4 |
| Benzo(a)pyrene | affects methylation, increases methylation | 2 |
| Nickel | decreases expression | 2 |
| Silicon Dioxide | increases expression, decreases expression | 2 |
| Tobacco Smoke Pollution | affects expression, decreases expression | 2 |
| chloroacetaldehyde | decreases expression | 1 |
| propionaldehyde | increases expression | 1 |
| pirinixic acid | increases activity, affects binding, decreases expression | 1 |
| sodium arsenate | decreases expression, increases abundance | 1 |
| arsenite | increases methylation | 1 |
| afimoxifene | increases expression | 1 |
| sodium arsenite | decreases expression | 1 |
| aflatoxin B2 | increases methylation | 1 |
| S-(1,2-dichlorovinyl)cysteine | affects response to substance, increases expression | 1 |
| 4-nonylphenol | affects cotreatment, decreases expression | 1 |
| di-n-butylphosphoric acid | affects expression | 1 |
| 4-tert-octylphenol | affects cotreatment, decreases expression | 1 |
| GW 4064 | decreases reaction, increases expression | 1 |
| 2-methyl-2H-pyrazole-3-carboxylic acid (2-methyl-4-o-tolylazophenyl)amide | increases expression, decreases reaction | 1 |
| Nebivolol | increases expression | 1 |
| Zoledronic Acid | increases expression | 1 |
| Cidofovir | increases expression | 1 |
| Alitretinoin | decreases reaction, increases expression | 1 |
| Glyphosate | increases expression | 1 |
| Air Pollutants | increases abundance, increases expression | 1 |
| Arsenic | decreases expression, increases abundance | 1 |
| Atrazine | increases expression | 1 |
| Vehicle Emissions | decreases reaction, increases expression | 1 |
| Chenodeoxycholic Acid | increases expression | 1 |
ChEMBL screening assays
83 unique, capped per target: 71 binding, 12 functional
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL4880302 | Binding | Vasoactive intestinal peptide receptor CEREP ligand profiling | Data for DCP probe ABT-546 |
| CHEMBL2160607 | Functional | Antagonist activity at human VPAC1 expressed in HT-29 cells assessed as inhibition of glucagon-induced cAMP accumulation preincubated for 30 mins prior to glucagon challenge measured after 30 mins post glucagon challenge by liquid scintilla | Discovery of a novel glucagon receptor antagonist N-[(4-{(1S)-1-[3-(3, 5-dichlorophenyl)-5-(6-methoxynaphthalen-2-yl)-1H-pyrazol-1-yl]ethyl}phenyl)carbonyl]-β-alanine (MK-0893) for the treatment of type II diabetes. — *J Med Chem* |
Cellosaurus cell lines
9 cell lines: 4 spontaneously immortalized cell line, 3 transformed cell line, 2 cancer cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_C0TV | ACTOne VIPR1 | Transformed cell line | Female |
| CVCL_H510 | CHO-K1/VPAC1/Galpha15 | Spontaneously immortalized cell line | Female |
| CVCL_KV88 | cAMP Hunter CHO-K1 VIPR1 Gs/Gq | Spontaneously immortalized cell line | Female |
| CVCL_KZ24 | PathHunter CHO-K1 VIPR1 beta-arrestin | Spontaneously immortalized cell line | Female |
| CVCL_LB47 | PathHunter U2OS VIPR1 Activated GPCR Internalization | Cancer cell line | Female |
| CVCL_T424 | Psi-CRIP-RxhVIPR-bsr | Transformed cell line | Male |
| CVCL_YK24 | HEK293 VIPR1 HiTSeeker | Transformed cell line | Female |
| CVCL_YK65 | U2OS VIPR1 cAMP-Nomad | Cancer cell line | Female |
| CVCL_ZK84 | GeneBLAzer VPAC1-CRE-bla CHO-K1 | Spontaneously immortalized cell line | Female |
Clinical trials (associated diseases)
Via MONDO — disease-level, not drug-specific.
Predicted chemistry — Sugi Predict
The predicted patent-compound landscape for VIPR1 across ~30M SureChEMBL compounds — explore on Sugi Predict.
Related Atlas pages
- Targeted by drugs: Secretin