VPS35
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Also known as FLJ10752MEM3PARK17
Summary
VPS35 (VPS35 retromer complex component, HGNC:13487) is a protein-coding gene on chromosome 16q11.2, encoding Vacuolar protein sorting-associated protein 35 (Q96QK1). Acts as a component of the retromer cargo-selective complex (CSC). It is a selective cancer dependency (DepMap: 66.8% of cell lines).
This gene belongs to a group of vacuolar protein sorting (VPS) genes. The encoded protein is a component of a large multimeric complex, termed the retromer complex, involved in retrograde transport of proteins from endosomes to the trans-Golgi network. The close structural similarity between the yeast and human proteins that make up this complex suggests a similarity in function. Expression studies in yeast and mammalian cells indicate that this protein interacts directly with VPS35, which serves as the core of the retromer complex.
Source: NCBI Gene 55737 — RefSeq curated summary.
At a glance
- Gene–disease (curated): Parkinson disease (Definitive, ClinGen) — +3 more curated relationships
- Clinical variants (ClinVar): 288 total — 1 pathogenic, 3 likely-pathogenic
- Phenotypes (HPO): 37
- Druggable target: yes — 1 molecules with ChEMBL bioactivity
- Cancer dependency (DepMap): dependent in 66.8% of screened cell lines
- MANE Select transcript:
NM_018206
Identifiers
Gene identifiers
| Field | Value |
|---|---|
| HGNC ID | HGNC:13487 |
| Approved symbol | VPS35 |
| Name | VPS35 retromer complex component |
| Location | 16q11.2 |
| Locus type | gene with protein product |
| Status | Approved |
| Aliases | FLJ10752, MEM3, PARK17 |
| Ensembl gene | ENSG00000069329 |
| Ensembl biotype | protein_coding |
| OMIM | 601501 |
| Entrez | 55737 |
Gene structure
Transcript identifiers
Ensembl transcripts: 25 — 15 protein_coding, 6 retained_intron, 3 nonsense_mediated_decay, 1 protein_coding_CDS_not_defined
ENST00000299138, ENST00000562420, ENST00000563884, ENST00000563984, ENST00000565228, ENST00000568191, ENST00000568612, ENST00000568642, ENST00000568784, ENST00000569950, ENST00000647959, ENST00000904858, ENST00000904859, ENST00000904860, ENST00000904861, ENST00000904862, ENST00000904863, ENST00000904864, ENST00000904865, ENST00000921303, ENST00000921304, ENST00000921305, ENST00000940929, ENST00000940930, ENST00000940931
RefSeq mRNA: 1 — MANE Select: NM_018206
NM_018206
CCDS: CCDS10721
Canonical transcript exons
ENST00000299138 — 17 exons
| Exon | Start | End |
|---|---|---|
| ENSE00001324467 | 46656132 | 46660651 |
| ENSE00001370884 | 46689131 | 46689178 |
| ENSE00003462295 | 46680671 | 46680853 |
| ENSE00003466377 | 46682079 | 46682175 |
| ENSE00003482608 | 46678943 | 46679156 |
| ENSE00003500189 | 46674314 | 46674462 |
| ENSE00003520515 | 46672265 | 46672472 |
| ENSE00003528700 | 46662983 | 46663162 |
| ENSE00003545714 | 46668930 | 46669052 |
| ENSE00003552095 | 46662243 | 46662482 |
| ENSE00003590505 | 46671705 | 46671860 |
| ENSE00003614117 | 46677315 | 46677398 |
| ENSE00003619992 | 46676583 | 46676692 |
| ENSE00003632461 | 46674564 | 46674660 |
| ENSE00003647410 | 46683508 | 46683606 |
| ENSE00003651100 | 46681377 | 46681500 |
| ENSE00003689527 | 46661718 | 46661861 |
Expression profiles
Bgee: expression breadth ubiquitous, 149 present calls, max score 97.51.
FANTOM5 (CAGE): breadth ubiquitous, TPM avg 37.1671 / max 686.9537, expressed in 1817 samples.
FANTOM5 promoters (2 alternative TSS)
| Promoter ID | TPM avg | Samples expressed |
|---|---|---|
| 157198 | 37.1064 | 1817 |
| 157197 | 0.0607 | 15 |
Top tissues by expression
151 total, by Bgee expression score (0-100, higher = more expressed):
| Tissue | Anatomy ID | Expression score | Quality |
|---|---|---|---|
| ventricular zone | UBERON:0003053 | 97.51 | gold quality |
| adrenal tissue | UBERON:0018303 | 96.77 | gold quality |
| corpus callosum | UBERON:0002336 | 96.65 | gold quality |
| embryo | UBERON:0000922 | 96.56 | gold quality |
| ganglionic eminence | UBERON:0004023 | 96.56 | gold quality |
| superior frontal gyrus | UBERON:0002661 | 96.20 | gold quality |
| cortical plate | UBERON:0005343 | 96.20 | gold quality |
| duodenum | UBERON:0002114 | 96.11 | gold quality |
| calcaneal tendon | UBERON:0003701 | 96.05 | gold quality |
| islet of Langerhans | UBERON:0000006 | 95.88 | gold quality |
| endometrium | UBERON:0001295 | 95.83 | gold quality |
| monocyte | CL:0000576 | 95.70 | gold quality |
| colonic epithelium | UBERON:0000397 | 95.61 | gold quality |
| leukocyte | CL:0000738 | 95.51 | gold quality |
| tonsil | UBERON:0002372 | 95.31 | gold quality |
| prefrontal cortex | UBERON:0000451 | 95.20 | gold quality |
| smooth muscle tissue | UBERON:0001135 | 95.04 | gold quality |
| rectum | UBERON:0001052 | 94.83 | gold quality |
| placenta | UBERON:0001987 | 94.55 | gold quality |
| urinary bladder | UBERON:0001255 | 94.50 | gold quality |
| vermiform appendix | UBERON:0001154 | 94.45 | gold quality |
| blood | UBERON:0000178 | 94.29 | gold quality |
| Brodmann (1909) area 9 | UBERON:0013540 | 94.29 | gold quality |
| bone marrow cell | CL:0002092 | 94.15 | gold quality |
| gall bladder | UBERON:0002110 | 93.89 | gold quality |
| stromal cell of endometrium | CL:0002255 | 93.76 | gold quality |
| dorsolateral prefrontal cortex | UBERON:0009834 | 93.76 | gold quality |
| frontal cortex | UBERON:0001870 | 93.50 | gold quality |
| frontal lobe | UBERON:0016525 | 93.50 | gold quality |
| primordial germ cell in gonad | CL:0000670 ∩ UBERON:0000991 | 93.43 | gold quality |
Single-cell (SCXA)
Detected in 1 experiment(s), a significant marker in 1.
| Experiment | Marker? | Max mean expression |
|---|---|---|
| E-ANND-3 | no | 0.00 |
Regulation
Is transcription factor: yes
Downstream targets (CollecTRI)
5 targets.
| Target | Regulation |
|---|---|
| DNM1L | Activation |
| LAMP1 | Repression |
| LAMP2 | Activation |
| SNCA | Repression |
| VPS26A | Activation |
miRNA regulators (miRDB)
175 targeting VPS35, top 30 by miRDB confidence (max_score; target_count = how many genes the miRNA targets in total — lower means more specific):
| miRNA | Max score | Avg score | miRNA target_count |
|---|---|---|---|
| HSA-MIR-513A-5P | 100.00 | 69.77 | 2465 |
| HSA-MIR-4795-3P | 100.00 | 74.62 | 4024 |
| HSA-MIR-3613-3P | 100.00 | 76.36 | 7965 |
| HSA-MIR-4533 | 100.00 | 69.48 | 2758 |
| HSA-MIR-1277-5P | 100.00 | 73.95 | 5056 |
| HSA-MIR-3689D | 100.00 | 66.14 | 1181 |
| HSA-MIR-6851-5P | 100.00 | 65.63 | 1294 |
| HSA-MIR-5692A | 100.00 | 74.40 | 6850 |
| HSA-MIR-548AW | 99.99 | 72.57 | 3559 |
| HSA-MIR-6759-5P | 99.99 | 66.54 | 785 |
| HSA-MIR-548C-3P | 99.99 | 74.01 | 7587 |
| HSA-MIR-513B-5P | 99.99 | 69.96 | 2150 |
| HSA-MIR-19A-3P | 99.98 | 75.33 | 2762 |
| HSA-MIR-19B-3P | 99.98 | 75.44 | 2754 |
| HSA-MIR-4775 | 99.98 | 75.00 | 6394 |
| HSA-MIR-3065-5P | 99.97 | 71.56 | 3281 |
| HSA-MIR-548AN | 99.97 | 70.91 | 2817 |
| HSA-MIR-6793-5P | 99.97 | 65.95 | 758 |
| HSA-MIR-3688-3P | 99.97 | 72.02 | 2834 |
| HSA-MIR-495-3P | 99.96 | 72.81 | 4197 |
| HSA-MIR-5688 | 99.96 | 73.23 | 4504 |
| HSA-MIR-1468-3P | 99.96 | 72.74 | 3797 |
| HSA-MIR-590-3P | 99.96 | 74.34 | 6478 |
| HSA-MIR-302E | 99.96 | 70.74 | 2669 |
| HSA-MIR-548AA | 99.96 | 70.64 | 3753 |
| HSA-MIR-548AP-3P | 99.96 | 70.64 | 3753 |
| HSA-MIR-548T-3P | 99.96 | 70.64 | 3753 |
| HSA-MIR-144-3P | 99.94 | 73.98 | 2698 |
| HSA-MIR-4778-3P | 99.93 | 70.40 | 1818 |
| HSA-MIR-145-5P | 99.92 | 71.13 | 1836 |
Functional genomics
DepMap (CRISPR cell-line fitness): dependent in 66.8% of screened cell lines.
Literature-anchored findings (GeneRIF, showing 40)
- These observations indicate that the mammalian retromer complex assembles by sequential association of SNX1/2 and Vps26-Vps29-Vps35 subcomplexes on endosomal membranes and that SNX1 and SNX2 play interchangeable but essential roles. (PMID:17101778)
- crystal structure of a VPS29-VPS35 subcomplex showing how the metallophosphoesterase-fold subunit VPS29 acts as a scaffold for the carboxy-terminal half of VPS35 (PMID:17891154)
- Membrane recruitment of the cargo-selective retromer subcomplex VPS35/29/26 is catalysed by the small GTPase Rab7 and inhibited by the Rab-GAP TBC1D5. (PMID:19531583)
- Depletion of the retromer by siRNA against Vps35 leads to mis-sorting of DMT1-II to LAMP2-positive structures, and expression of siRNA-resistant Vps35 can rescue this effect. (PMID:20164305)
- Vps35 mediates vesicle transport between the mitochondria and peroxisomes. (PMID:20619655)
- Knockdown of retromer protein VPS35 activity produces no change in the quantity or cellular distribution of total cellular amyloid precursor protein (APP) and has no affect on internalization of cell-surface APP. (PMID:21515373)
- Frameshift mutations of VPS genes and losses of expression of Vps13A and Vps35 proteins are common in gastric cancers and colorectal cancers with high microsatellite instability. (PMID:21733561)
- Disruption of VPS35 and retromer-mediated trans-membrane protein sorting, rescue, and recycling in the neurodegenerative process led to Parkinson disease. (PMID:21763482)
- Only a single heterozygous variant in the VPS35 gene caused late-onset Parkinson disease in this family. (PMID:21763483)
- The amino-terminal conserved, glutamate-rich sequence of herpesvirus saimiri Tip specifically interacts with the human retromer subunit Vps35 and inhibits retromer activity. (PMID:21849449)
- The results of this study concluded that VPS35 c.1858G>A mutation is an uncommon cause of familial Parkinson’s disease. (PMID:22154191)
- Failed to find any case of VPS35 pAsp620Asn mutation in a cohort of Italian patients with familial Parkinson disease. (PMID:22278960)
- Hence, our data do not support a major role for VPS35 variations in the genetic etiology of Lewy body disorders in the Flanders-Belgian population. (PMID:22336192)
- This study suggested that VPS35 Asp620Asn may be not associated with PD in Chinese population. (PMID:22410496)
- Data show that a component of the WASH regulatory complex (SHRC), FAM21, directly interacts with the retromer CSC protein VPS35. (PMID:22513087)
- We have extended the number of autosomal dominant PD families with VPS35 mutations to 13 families, worldwide; D620N is the most frequent. (PMID:22517097)
- VPS35 variants are not associated with Parkinson’s disease in the mainland Chinese population. (PMID:22673036)
- VPS35 mutations are a rare cause of PD in different populations. (PMID:22801713)
- result suggests that mutation in the VPS35 coding region probably does not represent a major cause of late-onset Parkinson Disease in the Chinese Han population. (PMID:22891780)
- This study reported that VPS35 mutation in Japanese patients with typical Parkinson’s disease. (PMID:22991136)
- Our study apart from identifying the p.Asp620Asn variant in familial cases also identified it in idiopathic Parkinson disease cases, and thus provides genetic evidence for a role of p.Asp620Asn in Parkinson disease in different populations worldwide. (PMID:23125461)
- Mutations in VPS35 were found to not play a role in Parkinson disease patients from Southwest China. (PMID:23261770)
- There is no evidence for an overall contribution of genetic variability in VPS35 (or EIF4G1) to Parkinson disease development in this large family. (PMID:23408866)
- Pathogenic mutation in VPS35 impairs its protection against MPP(+) cytotoxicity in dopaminergic neurons in Parkinson’s disease. (PMID:23411763)
- Pathogenic VPS35 mutations provide important insights into novel molecular targets for parkinson disease. (PMID:23536430)
- Its mutation causes Parkinson’s disease in Indian population. (PMID:23726718)
- Dominant expression of Vps35 D620N mutation results in endosomal trafficking alterations that may underpin its role in PD. (PMID:24152121)
- In 2011 two groups reported the identification of the same missense mutation (p.Asp620Asn) in the vacuolar protein sorting 35 (VPS35) gene, as a novel cause of autosomal dominant parkinson disease. (PMID:24262182)
- dominant VPS35 mutations lead to neurodegeneration in Parkinson’s disease. (PMID:24740878)
- D620N mutation in VPS35 restricts WASH complex recruitment to endosomes, inhibiting autophagy. The autophagy defects can be explained, at least in part, by abnormal trafficking of the autophagy protein ATG9A. (PMID:24819384)
- Its mutation is not a common cause of familial Parkinson’s disease. (PMID:24854799)
- the major defect of the D620N mutation in the retromer component VPS35 lies in the association to the actin-nucleating Wiskott-Aldrich syndrome and SCAR homolog (WASH) complex. (PMID:24980502)
- provides molecular insights into the essential role of Vps26 and Vps35 in Rab7-mediated recruitment of the core retromer complex (PMID:25367362)
- Mutagenesis studies coupled with coimmunoprecipitations revealed that retromer-mediated trafficking requires the Env cytoplasmic tail that we show binds directly to retromer components Vps35 and Vps26. (PMID:25393110)
- VPS35 p.D620N is loss-of-function mutation with respect to VPS35 regulating synaptic transmission and AMPA-type glutamate receptors recycling in mouse cortical neurons and dopamine neuron-like cells produced from stem cells of human p.D620N carriers. (PMID:25416282)
- This study demonstrated that Genetic variability of VPS35 in parkinsonism. (PMID:25475142)
- Data indicate that vesicular transport proteins VPS35 and VPS29 influence the levels of the other subunit of retromer. (PMID:25937119)
- findings provide evidence that the VPS35 D620N mutation likely confers pathogenicity through a partial loss of function mechanism and that this may be linked to other known pathogenic mechanisms such as mitochondrial dysfunction (PMID:26251041)
- VPS35 D620N and EIF4G1 R1205H mutations are not a common cause of Parkinson disease in the Greek population. (PMID:26300542)
- neither the R120W nor the N370S variant of the GBA gene nor D620N mutation of the VPS35 gene were detected among the Parkinson disease cases or the controls. (PMID:26547032)
Cross-species orthologs
5 orthologs
| Organism | Symbol | Gene ID |
|---|---|---|
| danio_rerio | vps35 | ENSDARG00000008224 |
| mus_musculus | Vps35 | ENSMUSG00000031696 |
| rattus_norvegicus | Vps35 | ENSRNOG00000017612 |
| drosophila_melanogaster | Vps35 | FBGN0034708 |
| caenorhabditis_elegans | WBGENE00006933 |
Protein
Protein identifiers
Vacuolar protein sorting-associated protein 35 — Q96QK1 (reviewed: Q96QK1)
Alternative names: Maternal-embryonic 3, Vesicle protein sorting 35
All UniProt accessions (4): Q96QK1, A0A3B3ITD4, H3BRJ7, I3L4S0
UniProt curated annotations — full annotation on UniProt →
Function. Acts as a component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway. The recruitment of the CSC to the endosomal membrane involves RAB7A and SNX3. The CSC seems to associate with the cytoplasmic domain of cargo proteins predominantly via VPS35; however, these interactions seem to be of low affinity and retromer SNX proteins may also contribute to cargo selectivity thus questioning the classical function of the CSC. The SNX-BAR retromer mediates retrograde transport of cargo proteins from endosomes to the trans-Golgi network (TGN) and is involved in endosome-to-plasma membrane transport for cargo protein recycling. The SNX3-retromer mediates the retrograde endosome-to-TGN transport of WLS distinct from the SNX-BAR retromer pathway. The SNX27-retromer is believed to be involved in endosome-to-plasma membrane trafficking and recycling of a broad spectrum of cargo proteins. The CSC seems to act as recruitment hub for other proteins, such as the WASH complex and TBC1D5. Required for retrograde transport of lysosomal enzyme receptor IGF2R and SLC11A2. Required to regulate transcytosis of the polymeric immunoglobulin receptor (pIgR-pIgA). Required for endosomal localization of WASHC2C. Mediates the association of the CSC with the WASH complex via WASHC2. Required for the endosomal localization of TBC1D5. (Microbial infection) The heterotrimeric retromer cargo-selective complex (CSC) mediates the exit of human papillomavirus from the early endosome and the delivery to the Golgi apparatus.
Subunit / interactions. Component of the heterotrimeric retromer cargo-selective complex (CSC), also decribed as vacuolar protein sorting subcomplex (VPS), formed by VPS26 (VPS26A or VPS26B), VPS29 and VPS35. The CSC has a highly elongated structure with VPS26 and VPS29 binding independently at opposite distal ends of VPS35 as central platform. The CSC is believed to associate with variable sorting nexins to form functionally distinct retromer complex variants. The originally described retromer complex (also called SNX-BAR retromer) is a pentamer containing the CSC and a heterodimeric membrane-deforming subcomplex formed between SNX1 or SNX2 and SNX5 or SNX6 (also called SNX-BAR subcomplex); the respective CSC and SNX-BAR subcomplexes associate with low affinity. The CSC associates with SNX3 to form a SNX3-retromer complex. The CSC associates with SNX27, the WASH complex and the SNX-BAR subcomplex to form the SNX27-retromer complex. Interacts with VPS26A, VPS26B, VPS29, SNX1, SNX2, IGF2R, SNX3, GOLPH3, LRRK2, SLC11A2, WASHC2A, WASHC2C, FKBP15, WASHC1, RAB7A, SNX27, WASHC5, EHD1. Interacts with MAGEL2; leading to recruitment of the TRIM27:MAGEL2 E3 ubiquitin ligase complex retromer-containing endosomes. Interacts with SORCS2. (Microbial infection) Interacts with human papillomavirus 16 minor capsid protein L2 (via C-terminus); this interaction mediates the transport of the capsid from the early endosome to the Golgi apparatus.
Subcellular location. Cytoplasm. Membrane. Endosome. Early endosome. Late endosome.
Tissue specificity. Ubiquitous. Highly expressed in heart, brain, placenta, skeletal muscle, spleen, thymus, testis, ovary, small intestine, kidney and colon.
Disease relevance. Parkinson disease 17 (PARK17) [MIM:614203] An autosomal dominant, adult-onset form of Parkinson disease. Parkinson disease is a complex neurodegenerative disorder characterized by bradykinesia, resting tremor, muscular rigidity and postural instability, as well as by a clinically significant response to treatment with levodopa. The pathology involves the loss of dopaminergic neurons in the substantia nigra and the presence of Lewy bodies (intraneuronal accumulations of aggregated proteins), in surviving neurons in various areas of the brain. The disease is caused by variants affecting the gene represented in this entry.
Similarity. Belongs to the VPS35 family.
RefSeq proteins (1): NP_060676* (*=MANE)
Domains & families (InterPro)
| ID | Name | Type |
|---|---|---|
| IPR005378 | Vps35 | Family |
| IPR016024 | ARM-type_fold | Homologous_superfamily |
| IPR042491 | Vps35_C | Homologous_superfamily |
Pfam: PF03635
UniProt features (80 total): helix 44, sequence variant 11, sequence conflict 7, strand 5, region of interest 4, turn 3, modified residue 3, mutagenesis site 2, chain 1
Structure
Experimental structures (PDB)
13 structures.
| PDB | Method | Resolution (Å) |
|---|---|---|
| 8R0J | X-RAY DIFFRACTION | 2.4 |
| 8R02 | X-RAY DIFFRACTION | 2.5 |
| 5OSI | X-RAY DIFFRACTION | 2.52 |
| 5F0J | X-RAY DIFFRACTION | 2.7 |
| 5F0P | X-RAY DIFFRACTION | 2.78 |
| 2R17 | X-RAY DIFFRACTION | 2.8 |
| 5F0K | X-RAY DIFFRACTION | 3.07 |
| 5F0M | X-RAY DIFFRACTION | 3.1 |
| 8RKS | X-RAY DIFFRACTION | 3.1 |
| 5F0L | X-RAY DIFFRACTION | 3.2 |
| 5OSH | X-RAY DIFFRACTION | 4.3 |
| 7BLN | ELECTRON MICROSCOPY | 8.9 |
| 7BLO | ELECTRON MICROSCOPY | 9.5 |
Predicted structure (AlphaFold)
| Model | pLDDT | Fraction very-high |
|---|---|---|
| AF-Q96QK1-F1 | 91.40 | 0.74 |
Functional residue map
Curated UniProt residues grouped by drug-discovery relevance — catalytic, ligand-binding, modification, and mutation-validated positions. Source: UniProtKB sequence features.
Post-translational modifications (3): 7, 783, 791
Mutagenesis-validated functional residues (2):
| Position | Phenotype |
|---|---|
| 108 | disrupts interaction with vps26; no effect on interaction with vps29. |
| 675 | disrupts interaction with vps29. does not effect interaction with vps26. |
Function
Pathways and Gene Ontology
Reactome pathways
1 pathways
| ID | Pathway |
|---|---|
| R-HSA-3238698 | WNT ligand biogenesis and trafficking |
MSigDB gene sets: 437 (showing top):
GOBP_NEGATIVE_REGULATION_OF_PROTEIN_CONTAINING_COMPLEX_ASSEMBLY, GOBP_PHENOL_CONTAINING_COMPOUND_METABOLIC_PROCESS, GOBP_RESPONSE_TO_NITROGEN_COMPOUND, RODRIGUES_THYROID_CARCINOMA_ANAPLASTIC_UP, GOBP_REGULATION_OF_AUTOPHAGY, GOBP_POSITIVE_REGULATION_OF_MITOCHONDRIAL_FISSION, GOBP_PHENOL_CONTAINING_COMPOUND_BIOSYNTHETIC_PROCESS, GOBP_LYSOSOMAL_TRANSPORT, GOBP_BEHAVIOR, RODRIGUES_THYROID_CARCINOMA_POORLY_DIFFERENTIATED_UP, GOBP_VACUOLE_ORGANIZATION, GOBP_INTRACELLULAR_PROTEIN_TRANSPORT, GOBP_INFLAMMATORY_RESPONSE, GOBP_SYNAPSE_ASSEMBLY, GOCC_VACUOLAR_MEMBRANE
GO Biological Process (46): intracellular protein transport (GO:0006886), lysosome organization (GO:0007040), positive regulation of gene expression (GO:0010628), negative regulation of gene expression (GO:0010629), regulation of mitochondrion organization (GO:0010821), Wnt signaling pathway (GO:0016055), regulation of macroautophagy (GO:0016241), regulation of protein stability (GO:0031647), protein destabilization (GO:0031648), endocytic recycling (GO:0032456), negative regulation of protein homooligomerization (GO:0032463), protein localization to endosome (GO:0036010), retrograde transport, endosome to Golgi (GO:0042147), mitochondrial fragmentation involved in apoptotic process (GO:0043653), transcytosis (GO:0045056), positive regulation of protein catabolic process (GO:0045732), negative regulation of inflammatory response (GO:0050728), modulation of chemical synaptic transmission (GO:0050804), voluntary musculoskeletal movement (GO:0050882), regulation of protein metabolic process (GO:0051246), positive regulation of dopamine receptor signaling pathway (GO:0060161), positive regulation of Wnt protein secretion (GO:0061357), regulation of synapse maturation (GO:0090128), positive regulation of mitochondrial fission (GO:0090141), positive regulation of canonical Wnt signaling pathway (GO:0090263), positive regulation of locomotion involved in locomotory behavior (GO:0090326), neurotransmitter receptor transport, endosome to postsynaptic membrane (GO:0098887), vesicle-mediated transport in synapse (GO:0099003), mitochondrion to lysosome vesicle-mediated transport (GO:0099074), neurotransmitter receptor transport, endosome to plasma membrane (GO:0099639), regulation of postsynapse assembly (GO:0150052), negative regulation of late endosome to lysosome transport (GO:1902823), regulation of dendritic spine maintenance (GO:1902950), positive regulation of dopamine biosynthetic process (GO:1903181), negative regulation of protein localization (GO:1903828), positive regulation of protein localization to cell periphery (GO:1904377), negative regulation of lysosomal protein catabolic process (GO:1905166), regulation of presynapse assembly (GO:1905606), regulation of terminal button organization (GO:2000331), positive regulation of signal transduction (GO:0009967)
GO Molecular Function (2): D1 dopamine receptor binding (GO:0031748), protein binding (GO:0005515)
GO Cellular Component (24): lysosome (GO:0005764), lysosomal membrane (GO:0005765), endosome (GO:0005768), early endosome (GO:0005769), late endosome (GO:0005770), cytosol (GO:0005829), endosome membrane (GO:0010008), postsynaptic density (GO:0014069), retromer complex (GO:0030904), retromer, cargo-selective complex (GO:0030906), neuron projection (GO:0043005), neuronal cell body (GO:0043025), perinuclear region of cytoplasm (GO:0048471), extracellular exosome (GO:0070062), tubular endosome (GO:0097422), dopaminergic synapse (GO:0098691), presynapse (GO:0098793), glutamatergic synapse (GO:0098978), mitochondrion-derived vesicle (GO:0099073), cytoplasm (GO:0005737), mitochondrion (GO:0005739), membrane (GO:0016020), synapse (GO:0045202), postsynapse (GO:0098794)
Reactome top-level categories
Rollup of top-1 pathways:
| Category | Pathways |
|---|---|
| Signaling by WNT | 1 |
GO top-level categories
Rollup of top GO terms by namespace:
| Category | Terms |
|---|---|
| cellular anatomical structure | 5 |
| endosome | 4 |
| synapse | 3 |
| gene expression | 2 |
| regulation of gene expression | 2 |
| endosomal transport | 2 |
| endomembrane system | 2 |
| cytoplasmic vesicle | 2 |
| cytoplasm | 2 |
| membrane protein complex | 2 |
| intracellular protein localization | 1 |
| protein transport | 1 |
| intracellular transport | 1 |
| lytic vacuole organization | 1 |
| positive regulation of macromolecule biosynthetic process | 1 |
| negative regulation of macromolecule biosynthetic process | 1 |
| mitochondrion organization | 1 |
| regulation of organelle organization | 1 |
| cell surface receptor signaling pathway | 1 |
| regulation of autophagy | 1 |
| macroautophagy | 1 |
| regulation of biological quality | 1 |
| regulation of protein stability | 1 |
| vesicle-mediated transport to the plasma membrane | 1 |
| negative regulation of protein oligomerization | 1 |
| regulation of protein homooligomerization | 1 |
| protein homooligomerization | 1 |
| protein localization to organelle | 1 |
| intercellular transport | 1 |
| cytosolic transport | 1 |
| apoptotic mitochondrial changes | 1 |
| vesicle-mediated transport | 1 |
| multicellular organismal process | 1 |
| positive regulation of catabolic process | 1 |
| protein catabolic process | 1 |
| regulation of protein catabolic process | 1 |
| positive regulation of protein metabolic process | 1 |
| inflammatory response | 1 |
| negative regulation of defense response | 1 |
| negative regulation of response to external stimulus | 1 |
Protein interactions and networks
STRING
3056 interactions, top by confidence (×1000):
| Protein A | Protein B | Partner UniProt | Score |
|---|---|---|---|
| VPS35 | SNX1 | Q13596 | 999 |
| VPS35 | VPS26A | O75436 | 999 |
| VPS35 | VPS26B | Q4G0F5 | 999 |
| VPS35 | VPS29 | Q9UBQ0 | 999 |
| VPS35 | SNX2 | P82862 | 997 |
| VPS35 | SNX3 | O60493 | 994 |
| VPS35 | SNX5 | Q9Y5X3 | 990 |
| VPS35 | SNX6 | Q9UNH7 | 964 |
| VPS35 | SNX27 | Q96L92 | 957 |
| VPS35 | DNAJC13 | O75165 | 904 |
| VPS35 | PRKN | O60260 | 898 |
| VPS35 | EIF4G1 | Q04637 | 898 |
| VPS35 | TBC1D5 | Q92609 | 874 |
| VPS35 | LRRK2 | Q5S007 | 863 |
| VPS35 | ATP13A2 | Q9NQ11 | 853 |
IntAct
225 interactions, top by confidence:
| A | B | Type | Score |
|---|---|---|---|
| VPS35 | VPS26A | psi-mi:“MI:0915”(physical association) | 0.980 |
| VPS26A | VPS35 | psi-mi:“MI:0915”(physical association) | 0.980 |
| VPS35 | VPS26A | psi-mi:“MI:0914”(association) | 0.980 |
| VPS35 | VPS26A | psi-mi:“MI:0407”(direct interaction) | 0.980 |
| VPS35 | VPS29 | psi-mi:“MI:0915”(physical association) | 0.970 |
| VPS29 | VPS35 | psi-mi:“MI:0915”(physical association) | 0.970 |
| VPS29 | VPS35 | psi-mi:“MI:0407”(direct interaction) | 0.970 |
| VPS35 | VPS29 | psi-mi:“MI:0407”(direct interaction) | 0.970 |
| VPS29 | VPS26A | psi-mi:“MI:0914”(association) | 0.930 |
| VPS26B | VPS35 | psi-mi:“MI:0915”(physical association) | 0.910 |
| VPS29 | TBC1D5 | psi-mi:“MI:0914”(association) | 0.860 |
| VPS26A | TBC1D5 | psi-mi:“MI:0914”(association) | 0.810 |
| TBC1D5 | VPS26A | psi-mi:“MI:0914”(association) | 0.810 |
| VPS29 | CCDC22 | psi-mi:“MI:0914”(association) | 0.790 |
| VPS29 | VPS26C | psi-mi:“MI:0914”(association) | 0.760 |
BioGRID (388): VPS35 (Two-hybrid), VPS35 (Affinity Capture-RNA), VPS35 (Affinity Capture-RNA), VPS35 (Affinity Capture-RNA), VPS35 (Affinity Capture-MS), VPS35 (Affinity Capture-MS), VPS35 (Affinity Capture-MS), VPS35 (Affinity Capture-MS), SNX3 (Reconstituted Complex), VPS35 (Reconstituted Complex), SLC11A2 (Reconstituted Complex), VPS26A (Reconstituted Complex), VPS29 (Reconstituted Complex), VPS35 (Affinity Capture-RNA), SAC3D1 (Co-fractionation)
ESM2 similar proteins: A0A0R4ITC5, A1L1F4, A4L9P7, E9Q8I9, F1MKX4, F1QFR9, F1R2X6, F8VPU6, O94915, P21359, P42345, P42346, P51593, P97526, Q04690, Q14997, Q29RF7, Q2HJG5, Q498H0, Q4KLU7, Q4QXM3, Q4VA53, Q5F3U9, Q5F3V3, Q5R6J0, Q5SSW2, Q5TBA9, Q5U241, Q5VYK3, Q6A026, Q6DDM4, Q6GP04, Q6NRP2, Q6P4S8, Q6PDI5, Q6TRW4, Q7PX35, Q7TMY8, Q7Z3U7, Q7Z6Z7
Diamond homologs: A8R7K9, F4I0P8, O74552, P34110, Q2HJG5, Q54C24, Q7X659, Q96QK1, Q9EQH3
SIGNOR signaling
1 interactions.
| A | Effect | B | Mechanism |
|---|---|---|---|
| PTCHD1 | “up-regulates quantity” | VPS35 | binding |
Enriched among interaction partners
Reactome pathways and GO biological processes over-represented among this gene’s 152 IntAct physical interaction partners (hypergeometric vs the genome-wide background, BH-FDR, gene-set size 15–500, ranked by fold). A functional readout of the neighbourhood — distinct from this gene’s own memberships above, and biased toward well-studied / hub proteins, so read it as themes rather than proof.
GO biological processes:
| GO term | Partners | Fold | FDR |
|---|---|---|---|
| endocytic recycling | 9 | 17.8× | 7e-07 |
| retrograde transport, endosome to Golgi | 10 | 15.2× | 6e-07 |
| endosomal transport | 6 | 10.8× | 3e-03 |
| protein transport | 22 | 7.2× | 5e-10 |
| endocytosis | 9 | 6.3× | 3e-03 |
Disease & clinical
Clinical variants and AI predictions
ClinVar
288 variants total. Per-class counts are floors (≥ shown; pagination cap):
| Classification | Count (floor) |
|---|---|
| Pathogenic | 1 |
| Likely pathogenic | 3 |
| Uncertain significance | 125 |
| Likely benign | 86 |
| Benign | 26 |
Top pathogenic / likely-pathogenic (4)
| Variant ID | HGVS | Classification |
|---|---|---|
| 30196 | NM_018206.6(VPS35):c.1858G>A (p.Asp620Asn) | Pathogenic |
| 208774 | NM_018206.6(VPS35):c.1463A>G (p.Gln488Arg) | Likely pathogenic |
| 4278242 | NM_018206.6(VPS35):c.2146C>G (p.Gln716Glu) | Likely pathogenic |
| 930214 | t(10;16)(q26;q11) | Likely pathogenic |
SpliceAI
2670 predictions. Top by Δscore:
| Variant | Effect | Δscore |
|---|---|---|
| 16:46660466:T:TA | donor_gain | 1.0000 |
| 16:46661711:CACT:C | donor_loss | 1.0000 |
| 16:46661712:ACTT:A | donor_loss | 1.0000 |
| 16:46661713:CTT:C | donor_loss | 1.0000 |
| 16:46661714:TTA:T | donor_loss | 1.0000 |
| 16:46661715:T:TG | donor_loss | 1.0000 |
| 16:46661716:A:AC | donor_gain | 1.0000 |
| 16:46661716:A:T | donor_loss | 1.0000 |
| 16:46661717:C:CA | donor_loss | 1.0000 |
| 16:46661717:C:CC | donor_gain | 1.0000 |
| 16:46661862:C:CC | acceptor_gain | 1.0000 |
| 16:46662241:ACCT:A | donor_gain | 1.0000 |
| 16:46662242:CCTC:C | donor_gain | 1.0000 |
| 16:46662244:T:TA | donor_gain | 1.0000 |
| 16:46662480:TGCCT:T | acceptor_loss | 1.0000 |
| 16:46662481:GCC:G | acceptor_loss | 1.0000 |
| 16:46662482:CCTAG:C | acceptor_loss | 1.0000 |
| 16:46663159:CATC:C | acceptor_gain | 1.0000 |
| 16:46663161:TCC:T | acceptor_loss | 1.0000 |
| 16:46663163:C:A | acceptor_loss | 1.0000 |
| 16:46663164:T:C | acceptor_loss | 1.0000 |
| 16:46668929:CCA:C | donor_gain | 1.0000 |
| 16:46669065:CAT:C | acceptor_gain | 1.0000 |
| 16:46669067:T:C | acceptor_gain | 1.0000 |
| 16:46669067:T:TC | acceptor_gain | 1.0000 |
| 16:46671701:ATAC:A | donor_gain | 1.0000 |
| 16:46671702:T:C | donor_gain | 1.0000 |
| 16:46671703:A:AC | donor_gain | 1.0000 |
| 16:46671703:A:C | donor_loss | 1.0000 |
| 16:46671704:C:CC | donor_gain | 1.0000 |
AlphaMissense
5286 scored. Top likely-pathogenic:
| Variant | Protein change | am_pathogenicity |
|---|---|---|
| 16:46662331:A:G | L660P | 1.000 |
| 16:46662431:C:G | A627P | 1.000 |
| 16:46663050:C:T | G587E | 1.000 |
| 16:46663051:C:G | G587R | 1.000 |
| 16:46663051:C:T | G587R | 1.000 |
| 16:46663056:A:G | L585P | 1.000 |
| 16:46663062:A:G | L583P | 1.000 |
| 16:46668961:A:G | L539P | 1.000 |
| 16:46668991:A:G | L529P | 1.000 |
| 16:46669006:C:G | R524P | 1.000 |
| 16:46669036:C:G | R514P | 1.000 |
| 16:46672431:A:G | L401P | 1.000 |
| 16:46672440:A:G | L398P | 1.000 |
| 16:46674356:A:G | L373P | 1.000 |
| 16:46674401:G:T | A358D | 1.000 |
| 16:46674402:C:G | A358P | 1.000 |
| 16:46674404:A:G | L357P | 1.000 |
| 16:46674413:A:G | L354P | 1.000 |
| 16:46674600:A:C | F325L | 1.000 |
| 16:46674600:A:T | F325L | 1.000 |
| 16:46674602:A:G | F325L | 1.000 |
| 16:46674656:C:G | A307P | 1.000 |
| 16:46674658:A:G | L306S | 1.000 |
| 16:46674660:T:A | R305S | 1.000 |
| 16:46674660:T:G | R305S | 1.000 |
| 16:46676583:C:A | R305I | 1.000 |
| 16:46676583:C:G | R305T | 1.000 |
| 16:46676584:T:C | R305G | 1.000 |
| 16:46676649:A:G | L283P | 1.000 |
| 16:46676670:A:G | L276P | 1.000 |
dbSNP variants (sampled 300 via entrez): RS1000102437 (16:46657188 T>C), RS1000114746 (16:46670190 A>C,G), RS1000341322 (16:46678072 G>A,C), RS1000541108 (16:46656880 C>T), RS1000954989 (16:46675874 A>G), RS1000978565 (16:46664463 T>C), RS1001066360 (16:46687283 T>C), RS1001144196 (16:46689865 G>A,C,T), RS1001161056 (16:46686289 G>C), RS1001171055 (16:46678722 A>G), RS1001175364 (16:46690137 A>G), RS1001531520 (16:46663942 C>T), RS1001613992 (16:46661026 A>G), RS1001641725 (16:46660771 A>G), RS1001671530 (16:46670445 A>G)
Disease associations
OMIM: gene MIM:601501 | disease phenotypes: MIM:614203, MIM:168600
GenCC curated gene-disease
| Disease | Classification | Inheritance |
|---|---|---|
| Parkinson disease | Definitive | Autosomal dominant |
| Parkinson disease 17 | Strong | Autosomal dominant |
| hereditary late onset Parkinson disease | Supportive | Autosomal dominant |
| intellectual disability | Limited | Autosomal recessive |
ClinGen Gene-Disease Validity (1)
Expert-panel classifications — Definitive > Strong > Moderate > Limited > Disputed > Refuted.
| Disease | Classification | Inheritance |
|---|---|---|
| Parkinson disease | Definitive | AD |
Mondo (6): Parkinson disease 17 (MONDO:0013625), Parkinson disease (MONDO:0005180), glioma (MONDO:0021042), late-onset Parkinson disease (MONDO:0008199), intellectual disability (MONDO:0001071), (MONDO:0018466)
Orphanet (3): Hereditary late-onset Parkinson disease (Orphanet:411602), Glial tumor (Orphanet:182067), NON RARE IN EUROPE: Parkinson disease (Orphanet:319705)
HPO phenotypes
37 total (30 of 37 shown, HPO-id order):
| HPO | Term |
|---|---|
| HP:0000006 | Autosomal dominant inheritance |
| HP:0000338 | Hypomimic face |
| HP:0000651 | Diplopia |
| HP:0000713 | Agitation |
| HP:0000716 | Depression |
| HP:0000726 | Dementia |
| HP:0000741 | Apathy |
| HP:0000744 | Low frustration tolerance |
| HP:0001268 | Mental deterioration |
| HP:0001300 | Parkinsonism |
| HP:0001332 | Dystonia |
| HP:0001337 | Tremor |
| HP:0001824 | Weight loss |
| HP:0002015 | Dysphagia |
| HP:0002063 | Rigidity |
| HP:0002067 | Bradykinesia |
| HP:0002120 | Cerebral cortical atrophy |
| HP:0002171 | Gliosis |
| HP:0002172 | Postural instability |
| HP:0002304 | Akinesia |
| HP:0002322 | Resting tremor |
| HP:0002359 | Frequent falls |
| HP:0002360 | Sleep disturbance |
| HP:0002362 | Shuffling gait |
| HP:0002367 | Visual hallucination |
| HP:0002548 | Parkinsonism with favorable response to dopaminergic medication |
| HP:0003394 | Muscle spasm |
| HP:0003581 | Adult onset |
| HP:0004409 | Hyposmia |
| HP:0004926 | Orthostatic hypotension due to autonomic dysfunction |
GWAS associations
0 associations (top):
MeSH disease descriptors (3)
| Descriptor | Name | Tree numbers |
|---|---|---|
| D005910 | Glioma | C04.557.465.625.600.380; C04.557.470.670.380; C04.557.580.625.600.380 |
| D008607 | Intellectual Disability | C10.597.606.360; C23.888.592.604.646; F01.700.687; F03.625.539 |
| D010300 | Parkinson Disease | C10.228.140.079.862.500; C10.228.662.600.400; C10.574.928.750 |
Drugs & pharmacology
Drug and pharmacology data
Is drug target: yes
ChEMBL targets (1): CHEMBL2216744 (SINGLE PROTEIN)
Molecules with ChEMBL bioactivity
1 molecules (phase ≥1), by development phase (incl. off-target/promiscuous compounds). Patent mentions across the top 20 by phase: 1,538 (via chembl_molecule»patent_compound — counts attach to the compound, not the gene–compound relationship, so off-target/promiscuous molecules can dominate).
| Molecule | Name | Phase | Patents |
|---|---|---|---|
| CHEMBL1232461 | MOLIBRESIB | 2 | 1,538 |
PharmGKB: 1 entry (VIP=true, CPIC=false)
ChEMBL bioactivities
3 potent at pChembl≥5 of 6 total, top 3 by pChembl (potency: 10 = 0.1 nM, 6 = 1 µM).
| pChembl | Type | Value | Unit | Molecule |
|---|---|---|---|---|
| 7.59 | Kd | 25.61 | nM | CHEMBL5653589 |
| 7.59 | ED50 | 25.61 | nM | CHEMBL5653589 |
| 5.24 | IC50 | 5760 | nM | MOLIBRESIB |
PubChem BioAssay actives
2 with measured affinity, of 14 total; 2 most potent distinct compounds. Largely complementary to BindingDB; screening values are coarse (µM, 4 dp), so sub-nM hits tie at the floor.
| Compound | Assay | Type | Value | Unit |
|---|---|---|---|---|
| 4-methyl-3-[(2-methyl-6-pyridin-3-ylpyrazolo[3,4-d]pyrimidin-4-yl)amino]-N-[3-(trifluoromethyl)phenyl]benzamide | 2149772: Binding affinity to human VPS35 incubated for 45 mins by Kinobead based pull down assay | kd | 0.0256 | uM |
| 2-[(4S)-6-(4-chlorophenyl)-8-methoxy-1-methyl-4H-[1,2,4]triazolo[4,3-a][1,4]benzodiazepin-4-yl]-N-ethylacetamide | 2178593: Inhibition of VPS35 (unknown origin) incubated for 1 hr by colloidal coomassie staining based LC-MS/MS analysis | ic50 | 5.7600 | uM |
CTD chemical–gene interactions
48 total (human), top 30 by PubMed support.
| Chemical | Actions (top 5) | PubMed papers |
|---|---|---|
| bisphenol A | decreases expression, increases expression | 2 |
| sodium arsenite | decreases expression | 2 |
| bisphenol S | affects expression, increases expression | 2 |
| Nickel | decreases expression, decreases reaction, affects expression | 2 |
| Tobacco Smoke Pollution | affects expression, increases expression | 2 |
| 7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxide | decreases expression, increases expression | 2 |
| FR900359 | affects phosphorylation | 1 |
| dicrotophos | decreases expression | 1 |
| sodium arsenate | decreases expression | 1 |
| titanium dioxide | increases expression | 1 |
| pyrogallol 1,3-dimethyl ether | affects localization, affects cotreatment, decreases expression | 1 |
| trichostatin A | decreases reaction, affects expression | 1 |
| beta-lapachone | increases expression | 1 |
| CGP 52608 | affects binding, increases reaction | 1 |
| 4-(5-benzo(1,3)dioxol-5-yl-4-pyridin-2-yl-1H-imidazol-2-yl)benzamide | affects cotreatment, increases expression | 1 |
| nutlin 3 | affects cotreatment, increases secretion | 1 |
| ICG 001 | increases expression | 1 |
| bisphenol B | increases expression | 1 |
| abrine | decreases expression | 1 |
| pentabrominated diphenyl ether 100 | decreases expression | 1 |
| LDN 193189 | affects cotreatment, increases expression | 1 |
| bisphenol AF | increases expression | 1 |
| Resveratrol | affects cotreatment, increases expression | 1 |
| Sunitinib | increases expression | 1 |
| Vorinostat | decreases expression | 1 |
| Acetaminophen | increases expression | 1 |
| Air Pollutants, Occupational | decreases expression | 1 |
| Atrazine | decreases expression | 1 |
| Cadmium | increases abundance, increases expression | 1 |
| Caffeine | affects phosphorylation | 1 |
ChEMBL screening assays
11 unique, capped per target: 11 binding
Representative assays (with source publication via chembl_document):
| Assay ID | Type | Description | Source paper |
|---|---|---|---|
| CHEMBL2217171 | Binding | Binding affinity to VPS35 in human HepG2 cell lysate after 1 hr by capture compound based LC/MS analysis | Dabigatran and dabigatran ethyl ester: potent inhibitors of ribosyldihydronicotinamide dehydrogenase (NQO2). — J Med Chem |
Cellosaurus cell lines
10 cell lines: 5 cancer cell line, 4 induced pluripotent stem cell, 1 transformed cell line
First 10 cell lines (id-ordered, not curated):
| Cellosaurus | Name | Category | Sex |
|---|---|---|---|
| CVCL_C0GD | JUCGRMi001-A | Induced pluripotent stem cell | Male |
| CVCL_C0GE | JUCGRMi001-B | Induced pluripotent stem cell | Male |
| CVCL_C0GF | JUCGRMi001-C | Induced pluripotent stem cell | Male |
| CVCL_D9VP | Ubigene HEK293 VPS35 KO | Transformed cell line | Female |
| CVCL_TX53 | HAP1 VPS35 (-) 1 | Cancer cell line | Male |
| CVCL_TX54 | HAP1 VPS35 (-) 2 | Cancer cell line | Male |
| CVCL_TX55 | HAP1 VPS35 (-) 3 | Cancer cell line | Male |
| CVCL_TX56 | HAP1 VPS35 (-) 4 | Cancer cell line | Male |
| CVCL_TX57 | HAP1 VPS35 (-) 5 | Cancer cell line | Male |
| CVCL_YD64 | LCSBi001-A | Induced pluripotent stem cell | Male |
Clinical trials (associated diseases)
497 trials via MONDO — disease-level, not drug-specific.
| Trial | Phase | Status | Title |
|---|---|---|---|
| NCT05657860 | PHASE4 | COMPLETED | Guanfacine Extended Release for the Reduction of Aggression and Self-injurious Behavior Associated With Prader-Willi Syndrome |
| NCT05744479 | PHASE4 | RECRUITING | Metformin for Antipsychotic-induced Weight Gain in Adults With Intellectual Disability |
| NCT06107829 | PHASE4 | WITHDRAWN | Valbenazine Treatment of Tardive Dyskinesia in Adults With Intellectual/Developmental Disabilities |
| NCT06997198 | PHASE4 | NOT_YET_RECRUITING | Deutetrabenazine Treatment for Tardive Dyskinesia in Intellectual/Developmental Disabilities |
| NCT00030979 | PHASE4 | COMPLETED | Donepezil to Treat Dementia in Parkinson’s Disease |
| NCT00043849 | PHASE4 | COMPLETED | Treatment of Agitation/Psychosis in Dementia/Parkinsonism (TAP/DAP) |
| NCT00095810 | PHASE4 | COMPLETED | Aripiprazole in Patients With Psychosis Associated With Parkinson’s Disease |
| NCT00125567 | PHASE4 | COMPLETED | Stalevo in Early Wearing-Off Patients |
| NCT00143026 | PHASE4 | COMPLETED | Study to Compare the Effect of Treatment With Carbidopa/Levodopa/Entacapone on the Quality of Life of Patients With Parkinson’s Disease. This Study is Not Recruiting in the United States |
| NCT00144300 | PHASE4 | COMPLETED | Ophthalmologic Safety Study of Pramipexole Immediate Release (IR) Versus Ropinirole in Early Parkinson’s Disease (PD) Patients |
| NCT00153972 | PHASE4 | COMPLETED | Dopamine Turnover Rate as Surrogate Parameter for Diagnosis of Early Parkinson’s Disease |
| NCT00174239 | PHASE4 | TERMINATED | Study Of Cabaser and Sinemet CR For The Treatment Of Nighttime Symptoms Associated With Parkinson’s Disease. |
| NCT00215904 | PHASE4 | COMPLETED | D-serine Adjuvant Treatment for Parkinson’s Disease |
| NCT00247247 | PHASE4 | COMPLETED | Comtess® Versus Cabaseril® as Add-on to Levodopa in the Treatment of Parkinsonian Patients Suffering From Wearing- Off. |
| NCT00272688 | PHASE4 | COMPLETED | Continuous Delivery of Levodopa in Patients With Advanced Idiopathic Parkinsons Disease - Cost-benefit |
| NCT00297778 | PHASE4 | COMPLETED | Pramipexole Versus Placebo in Parkinson’s Disease (PD) Patients With Depressive Symptoms |
| NCT00304161 | PHASE4 | COMPLETED | Effectiveness of Antidepressant Treatment for Depression in People With Parkinson’s Disease |
| NCT00307450 | PHASE4 | COMPLETED | Efficacy and Safety of Levetiracetam Versus Placebo on Levodopa-induced Dyskinesias in Advanced Parkinson’s Disease |
| NCT00321854 | PHASE4 | COMPLETED | Study of (Mirapex) Pramipexole for the Early Treatment of Parkinsons Disease (PD) |
| NCT00354133 | PHASE4 | UNKNOWN | Controlled Trial With Deep Brain Stimulation in Patients With Early Parkinson’s Disease |
| NCT00373087 | PHASE4 | COMPLETED | COMT Polymorphism and Entacapone Efficacy |
| NCT00391898 | PHASE4 | COMPLETED | Efficacy of Levodopa/Carbidopa/Entacapone vs Levodopa/Carbidopa in Parkinson’s Disease Patients With Early Wearing-off |
| NCT00399477 | PHASE4 | COMPLETED | A Non-Blinded Study Demonstrating the Effectiveness and Safety of Azilect Alone or in Combination Therapy in Parkinson’s Disease |
| NCT00402233 | PHASE4 | COMPLETED | A Randomized, Double-blind, Active (Pramipexole 0.5 mg Tid) and Placebo Controlled, Study of Pramipexole Given 0.5 mg and 0.75 mg Bid Over 12-week Treatment in Early Parkinson’s Disease (PD) Patients |
| NCT00437125 | PHASE4 | COMPLETED | Study on the Tolerability of Duloxetine in Depressed Patients With Parkinson’s Disease |
| NCT00443872 | PHASE4 | COMPLETED | Efficacy of Orally Disintegrating Selegiline in Parkinson’s Patients Experiencing Adverse Effects With Dopamine Agonists |
| NCT00455143 | PHASE4 | TERMINATED | Cognitive Protection - Dexmedetomidine and Cognitive Reserve |
| NCT00462007 | PHASE4 | COMPLETED | Study to Evaluate Initiation of Stalevo in Early Wearing-off |
| NCT00462254 | PHASE4 | TERMINATED | Ramelteon (ROZEREM) in the Treatment of Sleep Disturbances Associated With Parkinson’s Disease |
| NCT00477802 | PHASE4 | TERMINATED | Botulinum Toxin Type A (Botox) in the Management of Levodopa-Induced Peak-Dose Dyskinesias in Parkinson’s Disease |
| NCT00485069 | PHASE4 | COMPLETED | REQUIP (Ropinirole Hydrochloride) IR Long-Term Phase 4 Study |
| NCT00489255 | PHASE4 | COMPLETED | Safety/Efficacy of Tigan® to Control Nausea/Vomiting Experienced During Apokyn® Initiation and Treatment |
| NCT00526630 | PHASE4 | COMPLETED | Methylphenidate for the Treatment of Gait Impairment in Parkinson’s Disease |
| NCT00561678 | PHASE4 | COMPLETED | Perioperative Cognitive Function - Dexmedetomidine and Cognitive Reserve |
| NCT00571285 | PHASE4 | TERMINATED | Clinical Effects of Vitamin D Repletion in Patients With Parkinson’s Disease |
| NCT00584025 | PHASE4 | WITHDRAWN | Keppra IV for the Treatment of Motor Fluctuations in Parkinson’s Disease |
| NCT00584090 | PHASE4 | WITHDRAWN | Solifenacin Succinate (VESIcare) for the Treatment of Urinary Incontinence in Parkinson’s Disease |
| NCT00590122 | PHASE4 | COMPLETED | Parcopa Versus Carbidopa-levodopa in a Single Dose Cross-over Comparison Study |
| NCT00594464 | PHASE4 | COMPLETED | A Trial of Neupro® (Rotigotine Transdermal Patch) in Patients With Parkinson’s Disease Undergoing Surgery |
| NCT00601978 | PHASE4 | WITHDRAWN | Carbidopa/Levodopa Versus Carbidopa/Levodopa/Entacapone on Markers of Event Related Potentials (ERPs) in Patients With Idiopathic Parkinson’s Disease (PD) and End-of-dose Wearing Off |
Related Atlas pages
- Associated diseases: intellectual disability, Parkinson disease 17, Parkinson disease, late-onset Parkinson disease
- Disease cohort memberships (association, not causation — diseases whose associated-gene cohort lists this gene; a subset are also under Associated diseases): glioma, intellectual disability, late-onset Parkinson disease, Parkinson disease, Parkinson disease 17